iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025397

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01001149

Gene Name

LOC100183259

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000000362.3	ENSCINT00000000681.3	ENSCINP00000000681.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-31	106.9	356	390
UBD/Beta-Prp	5.00e-63	212.8	275	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH +++tcl++ +d +++v+G+ Dg++kvW+++ g
   Q: 356  GHYSGMTCLDYsPDgRYIVTGGEDGKVKVWNTSNG 390
           7999********999****************7655 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghedsvls 99
            +t+ +++ ++ +l+tg ++g   ++++ + +l++sls  e  +ta  f+++g++l+ +s+  + + vw+ ++ +++ + +gh +  ++
   Q: 275  SVTSTAYHTKTHVLVTGLATGAFHIHELPDFNLIHSLSISEHRITAAAFNNTGDWLALASSAlGQLLVWEWQSESYILKQQGHYSGMTC 363
           6788999***********************************************999999998999*********************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           l++sp+g ++v+G++d  ++vw++++g c+  t+s+h++ v++v++ ++g +++s+slD+tvr +dl + +  rt+t+    +  +ls+
   Q: 364  LDYSPDGRYIVTGGEDGKVKVWNTSNGFCFV-TFSEHKSNVTGVCFTSSGHVIISSSLDGTVRAFDLHRYRNFRTFTSPRPTQFVCLSV 451
           *******************************.********************************************************* PP
   S: 189  dsngkelvsgsldg.tvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW...d 250
           d +g+ +++gs+d+  v +w+++tg+ +++l +h+++v+s++fsp + +l+sgs D s+ +W   d
   Q: 452  DGSGELVAAGSRDTfEVFVWSIRTGRLLDILAAHEAPVSSLAFSPTESILASGSWDHSVIVWrigD 517
           *************956**********************************************4433 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MKFNYKFSNL VGTVYRTGNI SFLKDGDTVI SPVGNRVSLF DLKNNKSETL PITTKYNIVT 60
VAVAPNGCTA ILVDEVKEGE ATLISLISKS VLHRHHFRKP IKCIKYSPDG RKFAVTKDNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGTTAAG ATAATGTGTT GCATTTAGTT GAAAATGAAG TTTAATTACA AGGTTTGTGG 60
ATATTGTTGT AATAACACAT TTATATAAAT ACATAATAGT TGCTGCTAGG TGTTATAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	58.51	0.00e+00	892.00
IUUC-Atr-003033	Amborella trichopoda	40.11	9.00e-147	513.00
IUUC-Apl-003219	Anas platyrhynchos	59.94	0.00e+00	907.00
IUUC-Aca-004950	Anolis carolinensis	59.97	0.00e+00	904.00
IUUC-Aly-006213	Arabidopsis lyrata	38.89	6.00e-149	520.00
IUUC-Ath-006593	Arabidopsis thaliana	39.19	5.00e-147	513.00
IUUC-Ago-007916	Ashbya gossypii	42.32	8.00e-165	572.00
IUUC-Acl-008225	Aspergillus clavatus	42.39	3.00e-168	584.00
IUUC-Afl-008390	Aspergillus flavus	42.25	4.00e-164	570.00
IUUC-Afu-009039	Aspergillus fumigatus	42.61	3.00e-167	580.00
IUUC-Ani-009228	Aspergillus nidulans	40.42	2.00e-142	498.00
IUUC-Ang-009663	Aspergillus niger	41.09	4.00e-160	556.00
IUUC-Aor-009923	Aspergillus oryzae	42.25	4.00e-164	570.00
IUUC-Ate-010264	Aspergillus terreus	42.96	4.00e-169	587.00
IUUC-Ame-010790	Astyanax mexicanus	54.70	8.00e-135	472.00
IUUC-Bgr-012066	Blumeria graminis	42.33	6.00e-171	593.00
IUUC-Bta-012399	Bos taurus	58.88	0.00e+00	872.00
IUUC-Bci-013757	Botrytis cinerea	42.98	3.00e-165	574.00
IUUC-Bdi-015028	Brachypodium distachyon	40.08	7.00e-156	543.00
IUUC-Bol-016521	Brassica oleracea	41.77	3.00e-150	524.00
IUUC-Bra-017096	Brassica rapa	40.98	5.00e-149	520.00
IUUC-Cel-018690	Caenorhabditis elegans	38.89	6.00e-160	556.00
IUUC-Cja-019229	Callithrix jacchus	58.04	0.00e+00	880.00
IUUC-Cfa-020504	Canis familiaris	59.02	0.00e+00	889.00
IUUC-Cpo-021574	Cavia porcellus	57.49	0.00e+00	900.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	48.44	2.00e-123	435.00
IUUC-Csa-023436	Chlorocebus sabaeus	57.46	0.00e+00	864.00
IUUC-Csv-026194	Ciona savignyi	71.18	0.00e+00	1050.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	41.38	2.00e-159	555.00
IUUC-Cne-027031	Cryptococcus neoformans	43.47	2.00e-179	621.00
IUUC-Cme-027276	Cyanidioschyzon merolae	32.00	3.00e-88	318.00
IUUC-Dre-027514	Danio rerio	56.63	0.00e+00	843.00
IUUC-Dno-029191	Dasypus novemcinctus	59.03	0.00e+00	748.00
IUUC-Dor-030149	Dipodomys ordii	59.08	0.00e+00	885.00
IUUC-Dse-031260	Dothistroma septosporum	49.63	7.00e-120	422.00
IUUC-Dme-032043	Drosophila melanogaster	47.37	0.00e+00	724.00
IUUC-Ete-033102	Echinops telfairi	59.09	1.00e-180	625.00
IUUC-Eca-033223	Equus caballus	57.96	0.00e+00	888.00
IUUC-Fca-035795	Felis catus	53.28	0.00e+00	782.00
IUUC-Fal-036830	Ficedula albicollis	59.38	0.00e+00	902.00
IUUC-Fox-037835	Fusarium oxysporum	40.74	6.00e-158	550.00
IUUC-Fso-038324	Fusarium solani	41.33	8.00e-162	563.00
IUUC-Gmo-039355	Gadus morhua	56.76	0.00e+00	853.00
IUUC-Ggr-039840	Gaeumannomyces graminis	40.65	3.00e-151	528.00
IUUC-Gga-040907	Gallus gallus	63.39	1.00e-145	508.00
IUUC-Gac-042624	Gasterosteus aculeatus	57.60	0.00e+00	858.00
IUUC-Gma-043034	Glycine max	39.43	7.00e-158	550.00
IUUC-Hsa-046145	Homo sapiens	57.60	0.00e+00	890.00
IUUC-Hvu-047416	Hordeum vulgare	39.94	6.00e-156	543.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	56.87	0.00e+00	897.00
IUUC-Kpa-049150	Komagataella pastoris	42.14	4.00e-163	566.00
IUUC-Lch-049460	Latimeria chalumnae	58.46	0.00e+00	784.00
IUUC-Lpe-050840	Leersia perrieri	38.93	2.00e-150	525.00
IUUC-Loc-052733	Lepisosteus oculatus	59.34	0.00e+00	904.00
IUUC-Lma-053277	Leptosphaeria maculans	40.62	5.00e-161	560.00
IUUC-Laf-054294	Loxodonta africana	58.46	0.00e+00	904.00
IUUC-Mcc-054624	Macaca mulatta	57.60	0.00e+00	890.00
IUUC-Meu-056665	Macropus eugenii	49.13	0.00e+00	674.00
IUUC-Mor-057288	Magnaporthe oryzae	39.86	2.00e-153	534.00
IUUC-Mpo-057594	Magnaporthe poae	40.93	6.00e-152	530.00
IUUC-Mtr-058700	Medicago truncatula	42.24	3.00e-165	574.00
IUUC-Mla-058846	Melampsora laricipopulina	42.48	1.00e-164	572.00
IUUC-Mga-059207	Meleagris gallopavo	58.09	0.00e+00	857.00
IUUC-Mvi-060327	Microbotryum violaceum	44.62	0.00e+00	634.00
IUUC-Mmr-061264	Microcebus murinus	58.46	0.00e+00	854.00
IUUC-Mdo-062327	Monodelphis domestica	58.81	0.00e+00	907.00
IUUC-Mmu-063542	Mus musculus	57.88	0.00e+00	858.00
IUUC-Mac-065142	Musa acuminata	41.16	1.00e-161	562.00
IUUC-Mpu-066098	Mustela putorius furo	57.74	0.00e+00	739.00
IUUC-Mlu-067056	Myotis lucifugus	53.64	0.00e+00	775.00
IUUC-Nfi-068323	Neosartorya fischeri	42.54	2.00e-168	585.00
IUUC-Ncr-068925	Neurospora crassa	40.62	2.00e-166	578.00
IUUC-Nle-068970	Nomascus leucogenys	57.18	0.00e+00	880.00
IUUC-Opr-070966	Ochotona princeps	64.11	1.00e-133	468.00
IUUC-Ont-071252	Oreochromis niloticus	57.76	0.00e+00	865.00
IUUC-Oan-072737	Ornithorhynchus anatinus	58.81	0.00e+00	872.00
IUUC-Oba-075794	Oryza barthii	38.46	3.00e-142	498.00
IUUC-Obr-076617	Oryza brachyantha	40.00	1.00e-152	532.00
IUUC-Ogl-077022	Oryza glaberrima	39.97	4.00e-153	534.00
IUUC-Ogu-078757	Oryza glumaepatula	32.92	3.00e-70	258.00
IUUC-Oin-079813	Oryza indica	39.84	8.00e-152	529.00
IUUC-Olo-080265	Oryza longistaminata	39.94	4.00e-151	527.00
IUUC-Ome-081494	Oryza meridionalis	39.84	4.00e-152	530.00
IUUC-Oni-082639	Oryza nivara	32.92	2.00e-70	258.00
IUUC-Opu-084005	Oryza punctata	39.89	2.00e-152	531.00
IUUC-Oru-084883	Oryza rufipogon	32.92	3.00e-70	258.00
IUUC-Osa-086158	Oryza sativa	39.56	9.00e-152	529.00
IUUC-Ola-086822	Oryzias latipes	57.42	0.00e+00	865.00
IUUC-Olu-087741	Ostreococcus lucimarinus	30.73	9.00e-20	87.80
IUUC-Oga-088887	Otolemur garnettii	58.80	0.00e+00	857.00
IUUC-Oar-090110	Ovis aries	57.36	0.00e+00	831.00
IUUC-Pan-092808	Papio anubis	58.25	0.00e+00	897.00
IUUC-Psi-093954	Pelodiscus sinensis	59.64	0.00e+00	903.00
IUUC-Pno-094922	Phaeosphaeria nodorum	42.45	9.00e-167	579.00
IUUC-Ppa-095678	Physcomitrella patens	42.33	3.00e-150	524.00
IUUC-Pfo-097175	Poecilia formosa	58.41	0.00e+00	887.00
IUUC-Pab-098155	Pongo abelii	58.26	0.00e+00	897.00
IUUC-Pop-099635	Populus trichocarpa	39.05	1.00e-156	545.00
IUUC-Pca-100947	Procavia capensis	54.55	0.00e+00	823.00
IUUC-Ppe-101552	Prunus persica	41.20	1.00e-162	565.00
IUUC-Pva-102744	Pteropus vampyrus	52.51	0.00e+00	751.00
IUUC-Pgr-103389	Puccinia graminis	43.53	6.00e-169	586.00
IUUC-Ptt-103953	Puccinia triticina	35.09	7.00e-117	413.00
IUUC-Pte-104079	Pyrenophora teres	42.03	5.00e-163	566.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	42.31	1.00e-163	568.00
IUUC-Rno-105502	Rattus norvegicus	57.30	0.00e+00	888.00
IUUC-Sce-106390	Saccharomyces cerevisiae	43.34	9.00e-172	595.00
IUUC-Sha-107264	Sarcophilus harrisii	56.25	5.00e-70	256.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	41.13	4.00e-172	597.00
IUUC-Spo-108348	Schizosaccharomyces pombe	42.61	5.00e-170	590.00
IUUC-Smo-108982	Selaginella moellendorffii	40.94	5.00e-169	587.00
IUUC-Sit-110304	Setaria italica	41.00	2.00e-157	548.00
IUUC-Sly-111620	Solanum lycopersicum	52.25	4.00e-113	400.00
IUUC-Stu-112877	Solanum tuberosum	40.82	5.00e-161	560.00
IUUC-Sbi-114702	Sorghum bicolor	41.24	1.00e-155	541.00
IUUC-Sre-115129	Sporisorium reilianum	41.43	1.00e-160	558.00
IUUC-Ssc-115931	Sus scrofa	54.50	3.00e-72	264.00
IUUC-Tgu-116787	Taeniopygia guttata	58.96	0.00e+00	898.00
IUUC-Tru-118218	Takifugu rubripes	57.75	0.00e+00	868.00
IUUC-Tsy-119401	Tarsius syrichta	59.32	5.00e-108	384.00
IUUC-Tni-120046	Tetraodon nigroviridis	57.22	0.00e+00	838.00
IUUC-Tca-121685	Theobroma cacao	40.57	3.00e-160	557.00
IUUC-Tre-122154	Trichoderma reesei	41.97	1.00e-165	575.00
IUUC-Tvi-122451	Trichoderma virens	41.69	6.00e-163	566.00
IUUC-Tae-125397	Triticum aestivum	44.92	3.00e-83	301.00
IUUC-Tur-126650	Triticum urartu	40.48	7.00e-140	489.00
IUUC-Tme-127005	Tuber melanosporum	40.81	7.00e-164	569.00
IUUC-Tbe-128102	Tupaia belangeri	57.03	0.00e+00	653.00
IUUC-Ttr-128259	Tursiops truncatus	58.47	0.00e+00	868.00
IUUC-Uma-129511	Ustilago maydis	41.54	5.00e-164	570.00
IUUC-Vda-129833	Verticillium dahliae	39.74	2.00e-141	494.00
IUUC-Vvi-131572	Vitis vinifera	40.03	2.00e-149	521.00
IUUC-Xtr-131776	Xenopus tropicalis	52.02	1.00e-58	219.00
IUUC-Xma-133887	Xiphophorus maculatus	58.41	0.00e+00	861.00
IUUC-Yli-134427	Yarrowia lipolytica	41.97	1.00e-165	575.00
IUUC-Zma-135980	Zea mays	40.97	2.00e-154	538.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence