iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040132

Ensembl Protein ID

ENSGALP00000017198.2

UniProt Accession

E1C837; E1C837_CHICK

Genbank Protein ID

ENSGALP00000017198

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000139

Gene Name

STRN

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000010580.4	ENSGALT00000017218.4	ENSGALP00000017198.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-28	97.4	725	762
UBD/Beta-Prp	2.40e-44	152.1	640	799

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d vt+la  ++  +l sGs+D++i++W+l + ++++
   Q: 725  HLDAVTSLAVdPNgLYLMSGSHDCSIRLWNLESKTCIQ 762
           99*********77799***************9999987 PP

UBD/Beta-Prp

   S: 16   vkf.spdksllatgsrdgtikvwdvttgkllrsl.sgheae......vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           v+  s d sl+++++ +g + +++++t + + +l sg +++      ++ v  +p+ +i +t++eDr+ik +d +tgk +h++ +h d 
   Q: 640  VDLvSSDPSLMVASFNTGHTSIFNMETRQRILTLeSGVDNTvstscqINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLDA 728
           555478999*************************555555555555555555566666******************************* PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           v+sl+++p+g +l sGshd  ir+w+le+++c++e     ++ d+++  v++hp++++++s+++D   +++
   Q: 729  VTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEftaHRKKFDESIHDVAFHPSKCYIASAGADALAKVF 799
           **********************************877666777889999****************988887 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MDEQAGPGVF FSNNNNNNAL LLPPPTGGPG LEPGEAAAAA AAAAAGGGGG GVSAGGAAAP 60
VSASRAQYSV PGILHFLQHE WGRFEAERAE WEAERAELQA QIAFLQGERK GQENLKKDLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGGCCGCG GTAGCAGCCG GCGGGGGCGG CTGTCAGGCG GTGACGGCGG CGGGCGGGCG 60
GGACGCGCCC AGGTTGTGCC GCTGCCGGGA CGCGGCTGGG CGCGGCGGCG GCCGGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005923--C:bicellular tight junction
GO:0000159--C:protein phosphatase type 2A complex
GO:0008285--P:negative regulation of cell proliferation
GO:0016055--P:Wnt signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	87.55	0.00e+00	1223.00
IUUC-Apl-003927	Anas platyrhynchos	97.87	0.00e+00	1222.00
IUUC-Aca-004933	Anolis carolinensis	84.99	0.00e+00	1202.00
IUUC-Ame-010997	Astyanax mexicanus	72.97	0.00e+00	1031.00
IUUC-Bta-013077	Bos taurus	87.89	0.00e+00	1217.00
IUUC-Cja-018973	Callithrix jacchus	88.57	0.00e+00	1226.00
IUUC-Cfa-020988	Canis familiaris	84.64	0.00e+00	1128.00
IUUC-Cpo-022496	Cavia porcellus	83.15	0.00e+00	1233.00
IUUC-Csa-023829	Chlorocebus sabaeus	88.30	0.00e+00	1224.00
IUUC-Dre-028560	Danio rerio	68.06	0.00e+00	942.00
IUUC-Dno-029742	Dasypus novemcinctus	78.65	0.00e+00	1167.00
IUUC-Dor-030721	Dipodomys ordii	76.03	0.00e+00	1095.00
IUUC-Eca-033760	Equus caballus	88.05	0.00e+00	1179.00
IUUC-Eeu-034953	Erinaceus europaeus	89.58	0.00e+00	706.00
IUUC-Fca-036530	Felis catus	87.62	0.00e+00	1183.00
IUUC-Fal-037353	Ficedula albicollis	90.74	0.00e+00	965.00
IUUC-Gmo-039094	Gadus morhua	73.82	0.00e+00	664.00
IUUC-Gac-041713	Gasterosteus aculeatus	71.32	0.00e+00	1020.00
IUUC-Ggo-045455	Gorilla gorilla	74.04	0.00e+00	1035.00
IUUC-Hsa-046415	Homo sapiens	87.89	0.00e+00	1220.00
IUUC-Lch-050475	Latimeria chalumnae	79.45	0.00e+00	1156.00
IUUC-Loc-051859	Lepisosteus oculatus	79.57	0.00e+00	1105.00
IUUC-Laf-053537	Loxodonta africana	83.65	0.00e+00	1243.00
IUUC-Mcc-055817	Macaca mulatta	84.27	0.00e+00	1229.00
IUUC-Meu-055946	Macropus eugenii	64.00	0.00e+00	808.00
IUUC-Mga-059694	Meleagris gallopavo	99.57	0.00e+00	1231.00
IUUC-Mmr-060768	Microcebus murinus	84.52	0.00e+00	1232.00
IUUC-Mdo-061901	Monodelphis domestica	80.96	0.00e+00	1205.00
IUUC-Mmu-064154	Mus musculus	86.53	0.00e+00	1206.00
IUUC-Mpu-065827	Mustela putorius furo	82.72	0.00e+00	1206.00
IUUC-Mlu-067102	Myotis lucifugus	88.16	0.00e+00	1224.00
IUUC-Ncr-068831	Neurospora crassa	39.60	4.00e-22	99.80
IUUC-Nle-070008	Nomascus leucogenys	88.34	0.00e+00	1186.00
IUUC-Opr-071067	Ochotona princeps	53.82	6.00e-151	527.00
IUUC-Ont-072025	Oreochromis niloticus	71.64	0.00e+00	1014.00
IUUC-Oan-072950	Ornithorhynchus anatinus	88.92	0.00e+00	1136.00
IUUC-Ocu-074316	Oryctolagus cuniculus	87.62	0.00e+00	1172.00
IUUC-Ola-087279	Oryzias latipes	69.61	0.00e+00	978.00
IUUC-Oga-088284	Otolemur garnettii	83.15	0.00e+00	1226.00
IUUC-Oar-090304	Ovis aries	88.03	0.00e+00	1221.00
IUUC-Ptr-091052	Pan troglodytes	88.03	0.00e+00	1221.00
IUUC-Pan-092270	Papio anubis	80.20	0.00e+00	1195.00
IUUC-Psi-093907	Pelodiscus sinensis	91.73	0.00e+00	1077.00
IUUC-Pfo-097042	Poecilia formosa	71.67	0.00e+00	1092.00
IUUC-Pab-098110	Pongo abelii	88.03	0.00e+00	1221.00
IUUC-Pca-100266	Procavia capensis	72.02	0.00e+00	857.00
IUUC-Pva-102824	Pteropus vampyrus	82.65	0.00e+00	1186.00
IUUC-Pgr-103483	Puccinia graminis	37.86	8.00e-57	215.00
IUUC-Rno-105638	Rattus norvegicus	87.21	0.00e+00	1216.00
IUUC-Sha-107004	Sarcophilus harrisii	84.16	0.00e+00	1080.00
IUUC-Ssc-115280	Sus scrofa	83.90	0.00e+00	1229.00
IUUC-Tgu-116759	Taeniopygia guttata	97.01	0.00e+00	1229.00
IUUC-Tru-117944	Takifugu rubripes	72.50	0.00e+00	1021.00
IUUC-Tsy-119405	Tarsius syrichta	77.92	0.00e+00	990.00
IUUC-Tni-120571	Tetraodon nigroviridis	71.59	0.00e+00	1023.00
IUUC-Vpa-130294	Vicugna pacos	87.75	0.00e+00	1170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence