iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000040350.16	ENSMUST00000046903.5	ENSMUSP00000039011.5
ENSMUSG00000040350.16	ENSMUST00000155478.1	ENSMUSP00000118669.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
RAID2
Post-translational Modifications (PTMs)
CPLM	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-06	29.0	27	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk.............tcPvtrqplteedlvPnltl 61
             C+I le +r+Pv +++G+++ r++I ++ ++ g               cP +r+p ++++l Pn  l
   Q: 27   ATCSICLEFFREPVSVECGHSFCRACIMRCWERPGAgtgtatrtlpcplPCPQCREPARPSQLRPNRQL 95
           67*****************************77766678899************************987 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MATVGPRTGP NAGAEALALA AELQGEATCS ICLEFFREPV SVECGHSFCR ACIMRCWERP 60
GAGTGTATRT LPCPLPCPQC REPARPSQLR PNRQLAAVAS LLRRFSLPPT APGERGTPAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCAATGATG GCCAGCAGCT CTGCATATTT ACTCTGAGGC ACCTGGCTAT TTCCAGTTCC 60
CTGGGTGTAG CCTAGCGATG GAGGCCCATA GTCACTCAGC AGCTGGCGAT ATTGGGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR020457--Znf_B-box_chordata
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01406--BBOXZNFINGER
PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002208	Ailuropoda melanoleuca	74.27	1.00e-162	566.00
IUUC-Aca-004600	Anolis carolinensis	51.23	2.00e-127	449.00
IUUC-Bta-013412	Bos taurus	87.25	0.00e+00	777.00
IUUC-Cja-018837	Callithrix jacchus	75.63	0.00e+00	635.00
IUUC-Cfa-021142	Canis familiaris	82.63	0.00e+00	684.00
IUUC-Csa-023833	Chlorocebus sabaeus	88.66	0.00e+00	773.00
IUUC-Dno-029233	Dasypus novemcinctus	88.43	0.00e+00	763.00
IUUC-Dor-030639	Dipodomys ordii	73.02	1.00e-111	395.00
IUUC-Ete-032949	Echinops telfairi	73.92	4.00e-174	604.00
IUUC-Fca-035623	Felis catus	88.43	0.00e+00	801.00
IUUC-Fal-037164	Ficedula albicollis	53.07	3.00e-141	495.00
IUUC-Gga-040382	Gallus gallus	51.44	3.00e-142	498.00
IUUC-Gac-041608	Gasterosteus aculeatus	32.91	9.00e-66	244.00
IUUC-Ggo-044993	Gorilla gorilla	89.65	0.00e+00	781.00
IUUC-Hsa-046478	Homo sapiens	89.63	0.00e+00	788.00
IUUC-Itr-048378	Ictidomys tridecemlineatus	90.00	0.00e+00	804.00
IUUC-Mcc-054752	Macaca mulatta	89.63	0.00e+00	795.00
IUUC-Mga-059412	Meleagris gallopavo	48.49	2.00e-130	459.00
IUUC-Mvi-060296	Microbotryum violaceum	51.61	4.00e-06	47.00
IUUC-Mdo-062980	Monodelphis domestica	73.61	0.00e+00	717.00
IUUC-Mpu-066023	Mustela putorius furo	85.49	0.00e+00	776.00
IUUC-Nle-069798	Nomascus leucogenys	85.91	0.00e+00	803.00
IUUC-Opr-071019	Ochotona princeps	80.20	0.00e+00	694.00
IUUC-Ocu-074797	Oryctolagus cuniculus	87.84	0.00e+00	817.00
IUUC-Oar-090169	Ovis aries	87.06	0.00e+00	773.00
IUUC-Ptr-091172	Pan troglodytes	88.65	0.00e+00	770.00
IUUC-Pan-092631	Papio anubis	89.43	0.00e+00	793.00
IUUC-Pab-098704	Pongo abelii	86.83	4.00e-130	457.00
IUUC-Pca-100337	Procavia capensis	92.27	9.00e-102	363.00
IUUC-Rno-105413	Rattus norvegicus	96.86	0.00e+00	873.00
IUUC-Sha-107360	Sarcophilus harrisii	64.83	3.00e-159	555.00
IUUC-Ssc-115737	Sus scrofa	67.14	8.00e-164	570.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence