iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005980

Ensembl Protein ID

scaffold_302478.1

UniProt Accession

D7KZW0; D7KZW0_ARALL

Genbank Protein ID

EFH61660.1

Protein Name

Fie

Genbank Nucleotide ID

GL348715

Gene Name

FIE; ARALYDRAFT_898508

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_302478.1	scaffold_302478.1	scaffold_302478.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-21	75.1	172	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gH  +v +++f  sd  +++s++ D t+k+W++
   Q: 172  GHRYEVLSVDFhpSDiYRFASCGMDTTVKIWSM 204
           899*********999****************97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EVKKPLYAVV FNFLDARFFD VFVTAGGNRI 60
TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY VAAGGVKGII RVIDVNTETI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA ATTTCGAGTG ATGTCGAAGA TAACGTTAGG GAACGAGTCA ATTGTTGGGT 60
CTTTGACTCC ATCGAACAAG AAATCGTACA AAGTGACGAA TAGGATTCAA GAAGTTAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005677--C:chromatin silencing complex
GO:0043078--C:polar nucleus
GO:0016571--P:histone methylation
GO:2000014--P:regulation of endosperm development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:0009409--P:response to cold

KEGG

aly:ARALYDRAFT_898508

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000689	Aegilops tauschii	69.06	2.00e-156	544.00
IUUC-Aml-001510	Ailuropoda melanoleuca	40.06	7.00e-72	264.00
IUUC-Atr-002496	Amborella trichopoda	72.17	4.00e-150	523.00
IUUC-Apl-003768	Anas platyrhynchos	41.03	1.00e-74	272.00
IUUC-Aca-004382	Anolis carolinensis	41.03	7.00e-75	273.00
IUUC-Ath-006579	Arabidopsis thaliana	98.10	0.00e+00	754.00
IUUC-Ame-010987	Astyanax mexicanus	41.31	2.00e-73	268.00
IUUC-Bta-013432	Bos taurus	40.56	1.00e-75	276.00
IUUC-Bci-013970	Botrytis cinerea	27.82	3.00e-22	99.40
IUUC-Bdi-014553	Brachypodium distachyon	71.07	2.00e-159	554.00
IUUC-Bol-016522	Brassica oleracea	93.50	0.00e+00	721.00
IUUC-Bra-017137	Brassica rapa	93.50	0.00e+00	722.00
IUUC-Cel-018494	Caenorhabditis elegans	24.59	1.00e-21	97.40
IUUC-Cja-019066	Callithrix jacchus	40.56	1.00e-75	276.00
IUUC-Cfa-021261	Canis familiaris	40.56	1.00e-75	276.00
IUUC-Cpo-022375	Cavia porcellus	36.83	2.00e-63	236.00
IUUC-Csa-024005	Chlorocebus sabaeus	40.56	1.00e-75	276.00
IUUC-Cho-024881	Choloepus hoffmanni	40.76	7.00e-49	187.00
IUUC-Cin-025697	Ciona intestinalis	40.44	2.00e-75	275.00
IUUC-Csv-026221	Ciona savignyi	39.78	5.00e-75	273.00
IUUC-Cgl-026519	Colletotrichum gloeosporioides	27.18	5.00e-19	88.60
IUUC-Cne-026877	Cryptococcus neoformans	26.72	3.00e-19	89.70
IUUC-Cme-027353	Cyanidioschyzon merolae	41.67	1.00e-26	114.00
IUUC-Dre-028346	Danio rerio	41.36	2.00e-73	268.00
IUUC-Dno-029319	Dasypus novemcinctus	40.28	6.00e-75	273.00
IUUC-Dor-030746	Dipodomys ordii	31.37	3.00e-47	182.00
IUUC-Dse-031324	Dothistroma septosporum	27.78	5.00e-23	101.00
IUUC-Dme-031874	Drosophila melanogaster	39.00	1.00e-72	266.00
IUUC-Ete-032880	Echinops telfairi	37.02	3.00e-38	152.00
IUUC-Eca-034272	Equus caballus	40.56	1.00e-75	275.00
IUUC-Eeu-035303	Erinaceus europaeus	37.47	8.00e-69	253.00
IUUC-Fca-036008	Felis catus	40.56	2.00e-75	275.00
IUUC-Fal-037577	Ficedula albicollis	41.03	2.00e-74	271.00
IUUC-Fso-038294	Fusarium solani	27.46	1.00e-24	107.00
IUUC-Gmo-039008	Gadus morhua	39.13	5.00e-64	237.00
IUUC-Ggr-039894	Gaeumannomyces graminis	30.73	2.00e-18	86.30
IUUC-Gga-040859	Gallus gallus	41.03	1.00e-74	272.00
IUUC-Gac-041667	Gasterosteus aculeatus	41.74	3.00e-67	248.00
IUUC-Gma-043832	Glycine max	75.07	2.00e-172	597.00
IUUC-Ggo-045624	Gorilla gorilla	37.89	2.00e-71	262.00
IUUC-Hsa-046505	Homo sapiens	40.56	1.00e-75	276.00
IUUC-Hvu-047228	Hordeum vulgare	72.25	6.00e-75	272.00
IUUC-Itr-048381	Ictidomys tridecemlineatus	40.56	1.00e-75	276.00
IUUC-Lch-050492	Latimeria chalumnae	40.46	2.00e-73	269.00
IUUC-Lpe-050807	Leersia perrieri	68.13	4.00e-155	540.00
IUUC-Loc-052361	Lepisosteus oculatus	41.08	3.00e-73	268.00
IUUC-Lma-053058	Leptosphaeria maculans	26.02	2.00e-15	76.30
IUUC-Laf-053941	Loxodonta africana	40.45	3.00e-75	275.00
IUUC-Mcc-055518	Macaca mulatta	37.89	2.00e-71	262.00
IUUC-Mor-056944	Magnaporthe oryzae	27.04	3.00e-17	82.80
IUUC-Mtr-058716	Medicago truncatula	71.82	4.00e-159	553.00
IUUC-Mga-059469	Meleagris gallopavo	41.03	1.00e-74	272.00
IUUC-Mmr-061026	Microcebus murinus	37.89	2.00e-71	262.00
IUUC-Mdo-062346	Monodelphis domestica	40.85	5.00e-75	274.00
IUUC-Mmu-063785	Mus musculus	40.56	1.00e-75	276.00
IUUC-Mac-064681	Musa acuminata	72.28	3.00e-170	590.00
IUUC-Mpu-066862	Mustela putorius furo	40.56	1.00e-75	276.00
IUUC-Mlu-067103	Myotis lucifugus	39.06	1.00e-70	259.00
IUUC-Ncr-068782	Neurospora crassa	32.00	7.00e-21	95.10
IUUC-Nle-069472	Nomascus leucogenys	40.56	1.00e-75	276.00
IUUC-Opr-070376	Ochotona princeps	39.04	2.00e-42	166.00
IUUC-Ont-071513	Oreochromis niloticus	41.48	3.00e-75	275.00
IUUC-Oan-073202	Ornithorhynchus anatinus	40.56	6.00e-75	273.00
IUUC-Ocu-074012	Oryctolagus cuniculus	40.56	1.00e-75	276.00
IUUC-Oba-075030	Oryza barthii	70.17	6.00e-160	556.00
IUUC-Obr-076895	Oryza brachyantha	68.75	5.00e-158	549.00
IUUC-Ogl-077522	Oryza glaberrima	71.26	1.00e-153	535.00
IUUC-Ogu-078250	Oryza glumaepatula	65.47	3.00e-143	501.00
IUUC-Oin-079886	Oryza indica	69.89	2.00e-159	554.00
IUUC-Olo-080238	Oryza longistaminata	70.66	5.00e-157	546.00
IUUC-Ome-081204	Oryza meridionalis	65.19	8.00e-142	496.00
IUUC-Oni-082388	Oryza nivara	60.50	1.00e-131	462.00
IUUC-Opu-083537	Oryza punctata	69.29	8.00e-159	552.00
IUUC-Oru-084863	Oryza rufipogon	65.75	4.00e-144	503.00
IUUC-Osa-085622	Oryza sativa	69.61	1.00e-158	551.00
IUUC-Ola-087426	Oryzias latipes	39.73	4.00e-66	246.00
IUUC-Olu-087788	Ostreococcus lucimarinus	33.25	9.00e-52	196.00
IUUC-Oga-088228	Otolemur garnettii	40.56	1.00e-75	276.00
IUUC-Oar-090139	Ovis aries	40.56	2.00e-75	275.00
IUUC-Pan-092874	Papio anubis	40.38	8.00e-56	209.00
IUUC-Psi-093927	Pelodiscus sinensis	40.79	4.00e-75	274.00
IUUC-Pma-094740	Petromyzon marinus	39.92	8.00e-43	166.00
IUUC-Pno-095072	Phaeosphaeria nodorum	22.52	2.00e-11	62.80
IUUC-Ppa-095871	Physcomitrella patens	64.40	6.00e-149	519.00
IUUC-Pfo-097208	Poecilia formosa	41.21	9.00e-75	273.00
IUUC-Pab-097658	Pongo abelii	40.56	1.00e-75	276.00
IUUC-Pop-098930	Populus trichocarpa	76.57	1.00e-178	617.00
IUUC-Ppe-101807	Prunus persica	74.86	1.00e-174	604.00
IUUC-Pva-103191	Pteropus vampyrus	33.68	4.00e-57	214.00
IUUC-Pgr-103619	Puccinia graminis	28.44	4.00e-18	85.10
IUUC-Pte-104406	Pyrenophora teres	25.61	2.00e-22	99.80
IUUC-Pyt-104821	Pyrenophora triticirepentis	24.73	4.00e-16	78.60
IUUC-Rno-105854	Rattus norvegicus	40.56	1.00e-75	276.00
IUUC-Sha-107426	Sarcophilus harrisii	40.85	5.00e-75	274.00
IUUC-Smo-109638	Selaginella moellendorffii	65.90	1.00e-146	511.00
IUUC-Sit-110481	Setaria italica	69.15	3.00e-155	540.00
IUUC-Sly-111464	Solanum lycopersicum	74.66	2.00e-173	600.00
IUUC-Stu-112910	Solanum tuberosum	74.66	2.00e-173	600.00
IUUC-Sar-113754	Sorex araneus	38.22	1.00e-66	246.00
IUUC-Sbi-114023	Sorghum bicolor	69.97	4.00e-156	543.00
IUUC-Ssc-115386	Sus scrofa	40.56	1.00e-75	276.00
IUUC-Tgu-117123	Taeniopygia guttata	41.03	1.00e-74	273.00
IUUC-Tru-117720	Takifugu rubripes	39.63	1.00e-71	262.00
IUUC-Tsy-119584	Tarsius syrichta	37.89	2.00e-71	262.00
IUUC-Tni-119695	Tetraodon nigroviridis	40.44	4.00e-73	268.00
IUUC-Tca-121787	Theobroma cacao	75.75	1.00e-177	615.00
IUUC-Tvi-122409	Trichoderma virens	28.01	1.00e-22	100.00
IUUC-Tae-124454	Triticum aestivum	69.06	2.00e-156	544.00
IUUC-Tme-126906	Tuber melanosporum	29.80	4.00e-33	135.00
IUUC-Tbe-127557	Tupaia belangeri	38.35	1.00e-68	253.00
IUUC-Vda-129774	Verticillium dahliae	27.61	1.00e-20	93.60
IUUC-Vpa-130256	Vicugna pacos	32.37	1.00e-55	209.00
IUUC-Vvi-131201	Vitis vinifera	75.54	3.00e-176	610.00
IUUC-Xtr-132206	Xenopus tropicalis	40.56	8.00e-74	270.00
IUUC-Xma-134102	Xiphophorus maculatus	40.93	2.00e-74	272.00
IUUC-Zma-135593	Zea mays	69.97	2.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence