iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01000479

Gene Name

LOC100176758

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000005862.3	ENSCINT00000012099.3	ENSCINP00000012099.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-48	159.1	236	265
UBD/Beta-Prp	9.00e-111	369.6	57	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           H+++v+ l+  +d++ ++Gs+Dg +k+WD++
   Q: 236  HNGGVFTLHKsTDGY-ATGSRDGCVKLWDTS 265
           899999987667799.*************76 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvh 88
           + gh+++ i+ ++ +p+++l+atg  ++d  i vw+++t+++++ l  +h+ +v++v fs++g+ l++++ D  +t  vw+ ++g ++ 
   Q: 57   FLGHNDDIIS-LALHPHEQLVATGqvGKDPYICVWNAKTMQTVSILkDQHTHGVASVMFSHSGERLASVGLDgsNTFVVWEWRKGRMIA 144
           5578888888.9999********95558999***************889**************************************** PP
   S: 89   tlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
             kgh+d++ ++s++p++ ++lv+ + ++ i+ w l  ++   +     + g +++v cv+  + + l  sG+l++ + +W  + ++l 
   Q: 145  NAKGHTDRIFDISWDPTSeQRLVTCG-VKHIKFWSLCGNSLTPKrgvfGKVGDQQTVLCVSCAD-NHLTYSGTLNGDIYVW--RDNNLE 229
           ****************7747777776.*********9999999999765555666666666655.69**************..88**** PP
   S: 173  rtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgecvrtlnghtdn 224
           r  +++h++ v  l  + +g   ++gs+dg vklwd + +  + + +++ t  
   Q: 230  RVISSAHNGGVFTLHKSTDG--YATGSRDGCVKLWDTSfNPLTTVNFKDTTYG 280
           **************999976..89************99855555555555544 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MTDKTAPKSQ LRLDWVYGYR GHQCRNNLFY VSSDEIVYFV AGVGIVHNPR KQTQKFFLGH 60
NDDIISLALH PHEQLVATGQ VGKDPYICVW NAKTMQTVSI LKDQHTHGVA SVMFSHSGER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAATAGC TTGGCGAACA CTTAGAAGGA TCATAGGCTG TTCTATTTTA TTTATATTAA 60
GGTTTAAATA CCATTACGGC TATGACAGAT AAAACAGCGC CGAAATCGCA ATTACGTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0008017--F:microtubule binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	62.78	0.00e+00	2565.00
IUUC-Apl-003604	Anas platyrhynchos	62.37	0.00e+00	2529.00
IUUC-Aca-004572	Anolis carolinensis	60.98	0.00e+00	2464.00
IUUC-Ame-011681	Astyanax mexicanus	58.99	0.00e+00	2453.00
IUUC-Bta-012812	Bos taurus	62.63	0.00e+00	2560.00
IUUC-Cja-019191	Callithrix jacchus	62.26	0.00e+00	2532.00
IUUC-Cfa-020041	Canis familiaris	62.80	0.00e+00	2382.00
IUUC-Cpo-022304	Cavia porcellus	57.11	0.00e+00	2258.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	34.57	3.00e-98	354.00
IUUC-Csa-023689	Chlorocebus sabaeus	62.05	0.00e+00	2468.00
IUUC-Cho-025038	Choloepus hoffmanni	64.05	0.00e+00	993.00
IUUC-Csv-026014	Ciona savignyi	88.57	0.00e+00	3629.00
IUUC-Dre-028772	Danio rerio	58.20	0.00e+00	2431.00
IUUC-Dno-029982	Dasypus novemcinctus	62.00	0.00e+00	2461.00
IUUC-Dor-030980	Dipodomys ordii	55.89	0.00e+00	1044.00
IUUC-Ete-032554	Echinops telfairi	54.79	0.00e+00	637.00
IUUC-Eca-034161	Equus caballus	61.19	0.00e+00	2420.00
IUUC-Eeu-035180	Erinaceus europaeus	50.74	0.00e+00	925.00
IUUC-Fca-036307	Felis catus	62.73	0.00e+00	2562.00
IUUC-Fal-037332	Ficedula albicollis	61.95	0.00e+00	2486.00
IUUC-Gmo-039146	Gadus morhua	56.57	0.00e+00	2330.00
IUUC-Gga-041095	Gallus gallus	59.99	0.00e+00	1784.00
IUUC-Gac-042555	Gasterosteus aculeatus	59.22	0.00e+00	2416.00
IUUC-Ggo-045107	Gorilla gorilla	62.83	0.00e+00	2570.00
IUUC-Hsa-046482	Homo sapiens	62.83	0.00e+00	2571.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	61.25	0.00e+00	2459.00
IUUC-Lch-050306	Latimeria chalumnae	57.81	0.00e+00	2171.00
IUUC-Loc-052642	Lepisosteus oculatus	63.66	0.00e+00	2552.00
IUUC-Laf-053649	Loxodonta africana	61.73	0.00e+00	2491.00
IUUC-Mcc-054733	Macaca mulatta	58.61	0.00e+00	2422.00
IUUC-Meu-056618	Macropus eugenii	52.23	0.00e+00	1197.00
IUUC-Mga-059202	Meleagris gallopavo	61.53	0.00e+00	2424.00
IUUC-Mmr-060729	Microcebus murinus	61.55	0.00e+00	2546.00
IUUC-Mdo-062462	Monodelphis domestica	62.70	0.00e+00	2487.00
IUUC-Mmu-063865	Mus musculus	62.42	0.00e+00	2570.00
IUUC-Mpu-066724	Mustela putorius furo	62.73	0.00e+00	2567.00
IUUC-Mlu-067816	Myotis lucifugus	62.36	0.00e+00	2555.00
IUUC-Nle-069911	Nomascus leucogenys	58.87	0.00e+00	2425.00
IUUC-Opr-070213	Ochotona princeps	59.61	0.00e+00	1329.00
IUUC-Ont-071928	Oreochromis niloticus	61.34	0.00e+00	2493.00
IUUC-Oan-073563	Ornithorhynchus anatinus	62.88	0.00e+00	2556.00
IUUC-Ocu-074531	Oryctolagus cuniculus	62.83	0.00e+00	2562.00
IUUC-Ola-086738	Oryzias latipes	58.56	0.00e+00	2425.00
IUUC-Olu-087860	Ostreococcus lucimarinus	38.28	4.00e-118	417.00
IUUC-Oga-088665	Otolemur garnettii	62.08	0.00e+00	2447.00
IUUC-Oar-090429	Ovis aries	62.78	0.00e+00	2566.00
IUUC-Ptr-091008	Pan troglodytes	58.13	0.00e+00	2410.00
IUUC-Pan-092404	Papio anubis	59.05	0.00e+00	2428.00
IUUC-Psi-093281	Pelodiscus sinensis	62.13	0.00e+00	2529.00
IUUC-Pfo-096073	Poecilia formosa	58.08	0.00e+00	2441.00
IUUC-Pab-097900	Pongo abelii	58.76	0.00e+00	2420.00
IUUC-Pca-100177	Procavia capensis	59.47	0.00e+00	1055.00
IUUC-Pva-102880	Pteropus vampyrus	56.72	0.00e+00	2202.00
IUUC-Rno-105002	Rattus norvegicus	62.67	0.00e+00	2566.00
IUUC-Sha-106974	Sarcophilus harrisii	58.73	0.00e+00	2431.00
IUUC-Sar-113401	Sorex araneus	53.82	1.00e-175	610.00
IUUC-Ssc-116282	Sus scrofa	62.55	0.00e+00	2484.00
IUUC-Tgu-116807	Taeniopygia guttata	62.67	0.00e+00	2542.00
IUUC-Tru-118040	Takifugu rubripes	59.90	0.00e+00	2405.00
IUUC-Tsy-118941	Tarsius syrichta	51.55	0.00e+00	1733.00
IUUC-Tni-120118	Tetraodon nigroviridis	59.16	0.00e+00	2429.00
IUUC-Tbe-127467	Tupaia belangeri	52.65	0.00e+00	1092.00
IUUC-Ttr-129138	Tursiops truncatus	56.65	0.00e+00	2226.00
IUUC-Vpa-130083	Vicugna pacos	54.86	0.00e+00	2116.00
IUUC-Xtr-131835	Xenopus tropicalis	58.55	0.00e+00	2451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence