iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126840

Ensembl Protein ID

TRIUR3_30521-P1

UniProt Accession

M7ZY89; M7ZY89_TRIUA

Genbank Protein ID

EMS68148.1

Protein Name

Protein NEDD1

Genbank Nucleotide ID

KD010840

Gene Name

TRIUR3_30521

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_30521	TRIUR3_30521-T1	TRIUR3_30521-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-24	84.5	91	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           +s+++++f   + ++l+sG+  + +++WDl + +++
   Q: 91   ESIYSISFsnKGsRYLCSGGSGHIVRIWDLQRKRCI 126
           68******973369****************998886 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MGFVDPAAPL LATCGGDTVK LFDVTVESGD PCVLAYSPAP GHPVNAVKWN HTNLIVASAG 60
DDKKISLWHK KGQNVGQLPT STVDRGDDIE ESIYSISFSN KGSRYLCSGG SGHIVRIWDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGTTCG TGGATCCGGC GGCGCCGCTG CTCGCCACGT GCGGCGGCGA CACGGTGAAG 60
CTCTTCGACG TCACGGTGGA GTCCGGCGAC CCCTGCGTCC TCGCCTACTC CCCCGCTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005828--C:kinetochore microtubule
GO:0000919--P:cell plate assembly
GO:0009553--P:embryo sac development
GO:0009555--P:pollen development
GO:0032467--P:positive regulation of cytokinesis
GO:0060236--P:regulation of mitotic spindle organization
GO:2000694--P:regulation of phragmoplast microtubule organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	97.90	0.00e+00	848.00
IUUC-Aml-002397	Ailuropoda melanoleuca	30.16	2.00e-41	162.00
IUUC-Atr-002464	Amborella trichopoda	69.79	4.00e-179	620.00
IUUC-Apl-003870	Anas platyrhynchos	31.42	9.00e-39	154.00
IUUC-Aca-004925	Anolis carolinensis	31.80	2.00e-42	166.00
IUUC-Aly-005931	Arabidopsis lyrata	64.32	9.00e-168	582.00
IUUC-Ath-006681	Arabidopsis thaliana	63.64	1.00e-166	579.00
IUUC-Ame-010906	Astyanax mexicanus	30.42	5.00e-29	121.00
IUUC-Bta-013389	Bos taurus	31.91	4.00e-41	162.00
IUUC-Bdi-014340	Brachypodium distachyon	90.19	0.00e+00	1264.00
IUUC-Bol-015773	Brassica oleracea	62.90	7.00e-160	556.00
IUUC-Bra-016623	Brassica rapa	63.02	2.00e-156	545.00
IUUC-Cja-019541	Callithrix jacchus	28.11	7.00e-40	157.00
IUUC-Cfa-021218	Canis familiaris	30.49	3.00e-41	162.00
IUUC-Cpo-021697	Cavia porcellus	28.91	1.00e-38	153.00
IUUC-Csa-023620	Chlorocebus sabaeus	27.96	9.00e-40	157.00
IUUC-Cho-025105	Choloepus hoffmanni	29.00	3.00e-30	125.00
IUUC-Cin-025293	Ciona intestinalis	27.46	9.00e-24	104.00
IUUC-Csv-026234	Ciona savignyi	28.89	2.00e-21	94.70
IUUC-Dre-028251	Danio rerio	34.13	5.00e-32	131.00
IUUC-Dno-029281	Dasypus novemcinctus	33.33	4.00e-37	148.00
IUUC-Dor-031020	Dipodomys ordii	35.23	7.00e-13	68.20
IUUC-Ete-033113	Echinops telfairi	34.62	1.00e-36	147.00
IUUC-Eca-034230	Equus caballus	30.77	2.00e-37	149.00
IUUC-Eeu-034671	Erinaceus europaeus	32.89	3.00e-36	145.00
IUUC-Fca-035775	Felis catus	30.16	3.00e-39	155.00
IUUC-Fal-037557	Ficedula albicollis	31.51	4.00e-34	138.00
IUUC-Gmo-038586	Gadus morhua	31.25	1.00e-29	123.00
IUUC-Gga-040153	Gallus gallus	31.19	5.00e-37	148.00
IUUC-Gac-041385	Gasterosteus aculeatus	32.24	5.00e-35	141.00
IUUC-Gma-042844	Glycine max	52.87	0.00e+00	740.00
IUUC-Ggo-044576	Gorilla gorilla	27.69	4.00e-39	155.00
IUUC-Hsa-046198	Homo sapiens	27.69	3.00e-39	155.00
IUUC-Hvu-047794	Hordeum vulgare	99.38	2.00e-95	339.00
IUUC-Lch-050561	Latimeria chalumnae	26.25	1.00e-21	97.10
IUUC-Lpe-051469	Leersia perrieri	83.48	0.00e+00	1237.00
IUUC-Loc-052816	Lepisosteus oculatus	28.94	1.00e-27	117.00
IUUC-Laf-053880	Loxodonta africana	28.10	1.00e-34	140.00
IUUC-Mcc-054977	Macaca mulatta	28.23	6.00e-40	157.00
IUUC-Meu-056141	Macropus eugenii	34.13	6.00e-36	144.00
IUUC-Mtr-058441	Medicago truncatula	53.48	0.00e+00	749.00
IUUC-Mga-060141	Meleagris gallopavo	32.83	1.00e-36	146.00
IUUC-Mmr-061201	Microcebus murinus	28.85	2.00e-37	149.00
IUUC-Mdo-061855	Monodelphis domestica	35.19	1.00e-37	150.00
IUUC-Mmu-064342	Mus musculus	28.81	2.00e-36	146.00
IUUC-Mac-065368	Musa acuminata	63.59	0.00e+00	885.00
IUUC-Mpu-066191	Mustela putorius furo	28.37	8.00e-42	164.00
IUUC-Mlu-067310	Myotis lucifugus	30.85	2.00e-39	156.00
IUUC-Nle-069990	Nomascus leucogenys	27.69	3.00e-39	155.00
IUUC-Opr-070336	Ochotona princeps	34.25	1.00e-37	150.00
IUUC-Ont-071675	Oreochromis niloticus	32.67	2.00e-37	149.00
IUUC-Oan-072772	Ornithorhynchus anatinus	34.43	7.00e-38	150.00
IUUC-Ocu-074095	Oryctolagus cuniculus	29.84	8.00e-39	154.00
IUUC-Oba-075327	Oryza barthii	84.51	0.00e+00	1179.00
IUUC-Obr-076119	Oryza brachyantha	85.68	0.00e+00	1229.00
IUUC-Ogl-077820	Oryza glaberrima	85.26	0.00e+00	1207.00
IUUC-Ogu-078679	Oryza glumaepatula	85.25	0.00e+00	1176.00
IUUC-Oin-079891	Oryza indica	84.51	0.00e+00	1179.00
IUUC-Olo-080414	Oryza longistaminata	83.77	0.00e+00	1100.00
IUUC-Ome-081888	Oryza meridionalis	83.29	0.00e+00	1169.00
IUUC-Oni-082417	Oryza nivara	85.53	0.00e+00	1209.00
IUUC-Opu-083393	Oryza punctata	85.39	0.00e+00	1250.00
IUUC-Oru-084698	Oryza rufipogon	85.41	0.00e+00	1179.00
IUUC-Osa-086121	Oryza sativa	85.53	0.00e+00	1209.00
IUUC-Ola-086806	Oryzias latipes	32.70	9.00e-37	147.00
IUUC-Olu-087591	Ostreococcus lucimarinus	27.66	1.00e-20	93.20
IUUC-Oga-088622	Otolemur garnettii	30.07	1.00e-38	153.00
IUUC-Oar-090391	Ovis aries	32.54	3.00e-41	162.00
IUUC-Ptr-091036	Pan troglodytes	27.69	3.00e-39	155.00
IUUC-Pan-092576	Papio anubis	28.23	8.00e-40	157.00
IUUC-Psi-093450	Pelodiscus sinensis	30.03	2.00e-40	159.00
IUUC-Pma-094101	Petromyzon marinus	29.41	5.00e-34	137.00
IUUC-Ppa-095262	Physcomitrella patens	47.33	0.00e+00	663.00
IUUC-Pfo-097142	Poecilia formosa	31.20	1.00e-36	146.00
IUUC-Pab-097829	Pongo abelii	28.30	9.00e-40	157.00
IUUC-Pop-098972	Populus trichocarpa	67.87	3.00e-171	594.00
IUUC-Pca-100217	Procavia capensis	27.80	4.00e-31	128.00
IUUC-Ppe-101502	Prunus persica	69.30	1.00e-177	615.00
IUUC-Pva-102736	Pteropus vampyrus	29.84	2.00e-39	156.00
IUUC-Rno-104977	Rattus norvegicus	29.49	5.00e-37	148.00
IUUC-Sha-107003	Sarcophilus harrisii	35.19	2.00e-38	153.00
IUUC-Smo-109328	Selaginella moellendorffii	52.06	8.00e-142	496.00
IUUC-Sit-109796	Setaria italica	82.11	0.00e+00	1164.00
IUUC-Sly-110941	Solanum lycopersicum	53.36	0.00e+00	716.00
IUUC-Stu-112314	Solanum tuberosum	53.88	0.00e+00	709.00
IUUC-Sar-112926	Sorex araneus	26.01	1.00e-28	120.00
IUUC-Sbi-113822	Sorghum bicolor	78.61	0.00e+00	885.00
IUUC-Ssc-116242	Sus scrofa	31.19	3.00e-38	151.00
IUUC-Tgu-116765	Taeniopygia guttata	32.53	7.00e-35	141.00
IUUC-Tru-117738	Takifugu rubripes	29.01	5.00e-35	141.00
IUUC-Tsy-118856	Tarsius syrichta	30.56	3.00e-37	148.00
IUUC-Tni-120871	Tetraodon nigroviridis	28.78	2.00e-38	152.00
IUUC-Tca-120965	Theobroma cacao	53.93	0.00e+00	733.00
IUUC-Tae-123957	Triticum aestivum	97.94	0.00e+00	1351.00
IUUC-Ttr-128551	Tursiops truncatus	30.00	8.00e-32	130.00
IUUC-Vpa-130324	Vicugna pacos	30.29	7.00e-41	160.00
IUUC-Vvi-131699	Vitis vinifera	54.39	0.00e+00	762.00
IUUC-Xtr-131956	Xenopus tropicalis	31.19	3.00e-41	162.00
IUUC-Xma-132982	Xiphophorus maculatus	31.58	7.00e-36	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence