• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Pop-099622
UUCD1 version UUC-PoT-00448
Ensembl Protein ID POPTR_0004s15130.1
UniProt Accession U5GJ42; U5GJ42_POPTR
Genbank Protein ID ERP62239.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000340
Gene Name POPTRDRAFT_581484; POPTR_0004s15130g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s15130 POPTR_0004s15130.2 POPTR_0004s15130.2
POPTR_0004s15130 POPTR_0004s15130.1 POPTR_0004s15130.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 28.81 3.00e-19 92.80 IUUC-Hsa-046691
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MSAQNATPVI SPDRQQTPQN DNNAIEQEAE EEDKTAVVLK NPSYMDREGP PLDDCCPICF 60
GTFDVPCKAN CGHWYCGSCI LQYWKYSGPS SRCKCPMCSS RISNLTPEAS LHGQQEQEVV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099622|E3,RING|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGGAACACAA CATTTGAGCT TCCTGGTAAT TTCTCGGGGA AAGCGAGAGA GAGAAGAAAG 60
CGACAAGAAC AAATCTTCCT TTTAAAAGAG ATGAAAATGG AGACAAAATA AAAATGCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099622|E3,RING|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00097--zf-C3HC4
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin
KEGG pop:POPTR_0004s15130g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002276 Ailuropoda melanoleuca 27.89 5.00e-20 90.50
IUUC-Apl-003771 Anas platyrhynchos 28.75 7.00e-19 87.00
IUUC-Aca-004706 Anolis carolinensis 28.12 6.00e-18 84.00
IUUC-Ath-007338 Arabidopsis thaliana 54.92 2.00e-59 221.00
IUUC-Ame-011453 Astyanax mexicanus 30.32 9.00e-23 99.80
IUUC-Bta-013272 Bos taurus 27.23 2.00e-21 95.50
IUUC-Bra-016782 Brassica rapa 49.54 2.00e-57 214.00
IUUC-Cja-019253 Callithrix jacchus 29.76 7.00e-20 90.10
IUUC-Cfa-020844 Canis familiaris 28.33 7.00e-20 91.70
IUUC-Cpo-021645 Cavia porcellus 30.95 5.00e-21 94.00
IUUC-Csa-024012 Chlorocebus sabaeus 30.00 2.00e-20 92.00
IUUC-Cho-024304 Choloepus hoffmanni 29.37 1.00e-13 69.30
IUUC-Dre-028166 Danio rerio 30.87 2.00e-19 89.00
IUUC-Dno-029494 Dasypus novemcinctus 28.18 3.00e-20 91.70
IUUC-Dor-030259 Dipodomys ordii 31.43 1.00e-19 90.10
IUUC-Ete-032614 Echinops telfairi 23.70 2.00e-10 58.90
IUUC-Eca-033557 Equus caballus 26.84 1.00e-20 92.40
IUUC-Fca-035812 Felis catus 28.95 1.00e-20 92.80
IUUC-Fal-036654 Ficedula albicollis 32.90 3.00e-23 102.00
IUUC-Gmo-039635 Gadus morhua 28.91 4.00e-19 87.80
IUUC-Gga-040345 Gallus gallus 30.00 6.00e-24 103.00
IUUC-Gac-041668 Gasterosteus aculeatus 29.41 3.00e-21 94.70
IUUC-Ggo-045000 Gorilla gorilla 30.00 2.00e-20 92.00
IUUC-Hsa-046691 Homo sapiens 29.41 4.00e-20 90.90
IUUC-Itr-048988 Ictidomys tridecemlineatus 30.36 8.00e-21 93.20
IUUC-Loc-051785 Lepisosteus oculatus 30.64 5.00e-25 107.00
IUUC-Laf-054542 Loxodonta africana 29.47 4.00e-21 94.40
IUUC-Mcc-055234 Macaca mulatta 30.00 2.00e-20 92.00
IUUC-Mmr-060609 Microcebus murinus 26.32 2.00e-20 92.00
IUUC-Mdo-062853 Monodelphis domestica 30.53 1.00e-23 102.00
IUUC-Mmu-064383 Mus musculus 28.73 3.00e-20 91.70
IUUC-Mlu-067410 Myotis lucifugus 30.00 2.00e-22 98.60
IUUC-Nle-069537 Nomascus leucogenys 30.71 1.00e-19 89.00
IUUC-Ont-071800 Oreochromis niloticus 28.96 4.00e-21 94.40
IUUC-Oan-073190 Ornithorhynchus anatinus 27.98 2.00e-21 95.90
IUUC-Ocu-073899 Oryctolagus cuniculus 29.41 2.00e-20 91.70
IUUC-Ola-086372 Oryzias latipes 28.51 1.00e-20 92.40
IUUC-Oga-087988 Otolemur garnettii 27.93 9.00e-20 89.70
IUUC-Oar-089976 Ovis aries 27.23 2.00e-21 95.50
IUUC-Ptr-091377 Pan troglodytes 30.00 3.00e-20 91.70
IUUC-Pan-092348 Papio anubis 29.76 2.00e-20 92.40
IUUC-Psi-092982 Pelodiscus sinensis 30.41 8.00e-19 86.70
IUUC-Pfo-096366 Poecilia formosa 28.96 4.00e-21 94.40
IUUC-Pab-098242 Pongo abelii 28.57 6.00e-21 93.60
IUUC-Pva-102627 Pteropus vampyrus 26.84 7.00e-21 94.00
IUUC-Rno-105344 Rattus norvegicus 29.28 6.00e-21 94.00
IUUC-Sha-107420 Sarcophilus harrisii 29.47 6.00e-23 100.00
IUUC-Sly-111612 Solanum lycopersicum 47.45 5.00e-54 204.00
IUUC-Sar-113762 Sorex araneus 26.84 9.00e-21 93.20
IUUC-Tgu-116969 Taeniopygia guttata 32.90 2.00e-23 102.00
IUUC-Tru-118414 Takifugu rubripes 30.86 9.00e-19 86.70
IUUC-Tsy-119312 Tarsius syrichta 26.98 2.00e-20 91.70
IUUC-Tni-120687 Tetraodon nigroviridis 32.24 5.00e-21 94.00
IUUC-Tca-121055 Theobroma cacao 58.96 9.00e-63 232.00
IUUC-Tbe-127751 Tupaia belangeri 24.48 1.00e-09 56.60
IUUC-Ttr-128731 Tursiops truncatus 24.74 2.00e-13 69.30
IUUC-Vpa-130187 Vicugna pacos 28.65 1.00e-20 92.80
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved