iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-086886

Ensembl Protein ID

ENSORLP00000003839.1

UniProt Accession

H2LD41; H2LD41_ORYLA

Genbank Protein ID

ENSORLP00000003839

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04033439

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003075.1	ENSORLT00000003840.1	ENSORLP00000003839.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-47	156.7	1575	1612
UBD/Beta-Prp	2.40e-94	316.2	1412	1646

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+ sv++l+f ++  +l+sGs  g ++vW++ t +++
   Q: 1575 GHQRSVHSLSFfPSsSMLCSGSVSGEVRVWSVPTSTCV 1612
           8*********996669****************998885 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           +s+ +cv  spd++++++g  +gt+ + +++tg+ ++sl +  ++++++ f +dg  l+t+s D+   +wd+++g+ +  ++ h+++
   Q: 1412 SSRPSCVVLSPDGQMVVVGTGQGTLHIINTQTGQEVKSLVSSCDGISSCVFLKDG-QLATTSFDGRMELWDVENGCRTALITCHTNT 1497
           567789999******************************99999**********9.6****************************** PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
           ++  ++ p++++l++ s d t+++w   + +c e      ++  ncv+++p+g+ll++G+ ++ v +W+  ++k+ + l g h++sv
   Q: 1498 ITGSDITPDRKHLATVSLDFTLKMW---SSKCQEVASLSSSSPLNCVTFDPEGRLLAAGCWNGNVIMWNWLQNKVQKLLCG-HQRSV 1580
           *************************...5566653455666789******************************9999998.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +slsf +++  l sgs  g v++w++ t++cv  +++h   v    f++ +  l+s+++D ++++W
   Q: 1581 HSLSFFPSSSMLCSGSVSGEVRVWSVPTSTCVGCFQAHCGAVEAFTFLEGGAMLLSAGADHTLQLW 1646
           ****************************************************************** PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

DSEDSVWTTI QNLGKNISEI DPQFLLKVAV YTRQELNIRI TANFLLALAA SLPSTKRHVR 60
RYFCAAVQLP SDWLEVVRIY SACFSCSLPA CLKKAMADKF KQFSEYQLAK YNTRKHRCKH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTCGGAAG ACAGTGTCTG GACCACCATC CAAAACCTGG GCAAGAACAT TTCTGAAATC 60
GACCCCCAGT TTCTTCTCAA GGTGTGTCTG AGCGTGCTCT GTGTTGGTGG GGGAGATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR025139--DUF4062
IPR027417--P-loop_NTPase
IPR011047--Quinoprotein_ADH-like_supfam
IPR008858--TROVE_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50988--TROVE
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13271--DUF4062
PF05731--TROVE
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001482	Ailuropoda melanoleuca	35.24	0.00e+00	1082.00
IUUC-Aca-005102	Anolis carolinensis	36.66	0.00e+00	1170.00
IUUC-Ame-011822	Astyanax mexicanus	50.33	0.00e+00	1596.00
IUUC-Bta-012323	Bos taurus	35.51	0.00e+00	1061.00
IUUC-Cja-019005	Callithrix jacchus	34.74	0.00e+00	1149.00
IUUC-Cfa-020803	Canis familiaris	34.68	0.00e+00	988.00
IUUC-Cpo-022312	Cavia porcellus	34.95	0.00e+00	1087.00
IUUC-Csa-023287	Chlorocebus sabaeus	35.13	0.00e+00	1105.00
IUUC-Dre-028825	Danio rerio	51.45	0.00e+00	2045.00
IUUC-Dno-029455	Dasypus novemcinctus	33.75	0.00e+00	1000.00
IUUC-Dor-030328	Dipodomys ordii	32.20	0.00e+00	684.00
IUUC-Ete-032385	Echinops telfairi	37.41	0.00e+00	720.00
IUUC-Eca-033726	Equus caballus	35.19	0.00e+00	1109.00
IUUC-Eeu-034665	Erinaceus europaeus	36.47	4.00e-90	327.00
IUUC-Fca-035365	Felis catus	34.67	0.00e+00	1083.00
IUUC-Gmo-039584	Gadus morhua	55.47	0.00e+00	1072.00
IUUC-Gac-042307	Gasterosteus aculeatus	62.57	0.00e+00	2268.00
IUUC-Ggo-045432	Gorilla gorilla	34.02	0.00e+00	1043.00
IUUC-Hsa-046182	Homo sapiens	35.09	0.00e+00	1115.00
IUUC-Itr-049021	Ictidomys tridecemlineatus	35.12	0.00e+00	1136.00
IUUC-Lch-050186	Latimeria chalumnae	34.82	3.00e-73	268.00
IUUC-Laf-054524	Loxodonta africana	34.73	0.00e+00	1144.00
IUUC-Mcc-055628	Macaca mulatta	35.02	0.00e+00	1108.00
IUUC-Meu-056338	Macropus eugenii	38.23	1.00e-102	368.00
IUUC-Mmr-060854	Microcebus murinus	33.61	0.00e+00	1147.00
IUUC-Mdo-062247	Monodelphis domestica	34.30	0.00e+00	1086.00
IUUC-Mmu-064406	Mus musculus	34.40	0.00e+00	1148.00
IUUC-Mpu-065806	Mustela putorius furo	35.18	0.00e+00	1098.00
IUUC-Mlu-068116	Myotis lucifugus	34.82	0.00e+00	1023.00
IUUC-Nle-069628	Nomascus leucogenys	34.90	0.00e+00	1089.00
IUUC-Opr-070242	Ochotona princeps	32.57	0.00e+00	743.00
IUUC-Oan-073598	Ornithorhynchus anatinus	34.39	9.00e-160	558.00
IUUC-Ocu-073933	Oryctolagus cuniculus	34.07	0.00e+00	1144.00
IUUC-Oga-088609	Otolemur garnettii	34.96	0.00e+00	1090.00
IUUC-Oar-089957	Ovis aries	35.39	0.00e+00	1034.00
IUUC-Ptr-090577	Pan troglodytes	35.37	0.00e+00	1094.00
IUUC-Pan-092397	Papio anubis	35.05	0.00e+00	1106.00
IUUC-Pma-094373	Petromyzon marinus	31.71	1.00e-57	217.00
IUUC-Pfo-096497	Poecilia formosa	63.24	0.00e+00	2313.00
IUUC-Pab-098028	Pongo abelii	35.48	0.00e+00	1108.00
IUUC-Pca-101002	Procavia capensis	36.07	0.00e+00	658.00
IUUC-Pva-102144	Pteropus vampyrus	37.59	7.00e-170	592.00
IUUC-Rno-105828	Rattus norvegicus	34.98	0.00e+00	1084.00
IUUC-Sha-106469	Sarcophilus harrisii	35.18	0.00e+00	1097.00
IUUC-Sar-113035	Sorex araneus	32.89	4.00e-132	467.00
IUUC-Ssc-116122	Sus scrofa	34.84	0.00e+00	750.00
IUUC-Tru-118412	Takifugu rubripes	60.40	0.00e+00	2394.00
IUUC-Tsy-119257	Tarsius syrichta	33.73	2.00e-100	361.00
IUUC-Tni-120032	Tetraodon nigroviridis	65.90	2.00e-104	372.00
IUUC-Tbe-127312	Tupaia belangeri	41.56	2.00e-77	285.00
IUUC-Ttr-128335	Tursiops truncatus	34.31	0.00e+00	959.00
IUUC-Xtr-132524	Xenopus tropicalis	35.63	0.00e+00	1097.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence