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Tag Content
iUUCD ID IUUC-Cja-019994
Ensembl Protein ID ENSCJAP00000026540.2
UniProt Accession F7IE04; F7IE04_CALJA
Genbank Protein ID ENSCJAP00000026540
Protein Name Presenilin
Genbank Nucleotide ID ACFV01068758
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCJAG00000014387.2 ENSCJAT00000028054.2 ENSCJAP00000026540.2
ENSCJAG00000014387.2 ENSCJAT00000028046.2 ENSCJAP00000026532.2
ENSCJAG00000014387.2 ENSCJAT00000027976.2 ENSCJAP00000026466.2
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 2.40e-08 34.8 271 310
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavnnLLe 41
    +eta+e+++++FP+l+ys+++v+L++++ +++a+ + +
   Q: 271 VETAQERNETLFPALIYSSTMVWLVNMAEGDPEAQRRVSK 310
    89***************************99999987765 PP
   

Organism Callithrix jacchus
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
IKKVPCRCQY LSYISEDKQL YYAGMNREND NRERQEQNDR RRVGHPEPLS NGRPQGNSRQ 60
VVEQDEEEDE ELTLKYGAKH VIMLFVPVTL CMVVVVATIK SVSFYTRKDG QLIYTPFTED 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Cja-019994|UBD,CUE|Callithrix jacchus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGGGCTTTC GGGCGGGGCC TGGGACAGGC AGCTCCGGGG TCCGCGGTTT CACTTCGGAA 60
ACAAAACAGC GGCTGGTCTG GAAGGAATCT GAACTGCGAG CGGCGGTGGC GGCGGCGGCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Cja-019994|UBD,CUE|Callithrix jacchus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 33.44 5.00e-22 100.00
IUUC-Aml-001648 Ailuropoda melanoleuca 92.33 6.00e-162 563.00
IUUC-Atr-003039 Amborella trichopoda 31.46 5.00e-38 152.00
IUUC-Apl-003727 Anas platyrhynchos 86.73 8.00e-173 599.00
IUUC-Aca-004582 Anolis carolinensis 85.07 6.00e-177 613.00
IUUC-Aly-005455 Arabidopsis lyrata 32.09 3.00e-18 86.30
IUUC-Ath-006730 Arabidopsis thaliana 32.05 3.00e-32 132.00
IUUC-Ame-011500 Astyanax mexicanus 75.28 2.00e-149 521.00
IUUC-Bta-013026 Bos taurus 83.89 0.00e+00 645.00
IUUC-Bdi-014196 Brachypodium distachyon 32.69 4.00e-28 119.00
IUUC-Bol-015841 Brassica oleracea 36.59 3.00e-31 129.00
IUUC-Bra-017580 Brassica rapa 34.80 2.00e-30 126.00
IUUC-Cel-018553 Caenorhabditis elegans 52.59 2.00e-93 336.00
IUUC-Cfa-020074 Canis familiaris 88.68 0.00e+00 683.00
IUUC-Cpo-022237 Cavia porcellus 95.22 0.00e+00 714.00
IUUC-Csa-023537 Chlorocebus sabaeus 93.59 0.00e+00 742.00
IUUC-Cho-024735 Choloepus hoffmanni 77.45 1.00e-176 612.00
IUUC-Cin-025780 Ciona intestinalis 62.91 4.00e-124 437.00
IUUC-Csv-025967 Ciona savignyi 62.72 5.00e-118 417.00
IUUC-Dre-028689 Danio rerio 78.80 1.00e-144 506.00
IUUC-Dno-029758 Dasypus novemcinctus 94.08 0.00e+00 670.00
IUUC-Dor-030609 Dipodomys ordii 69.23 6.00e-159 553.00
IUUC-Dme-031929 Drosophila melanogaster 55.53 5.00e-109 387.00
IUUC-Ete-032487 Echinops telfairi 84.29 4.00e-83 301.00
IUUC-Eeu-035134 Erinaceus europaeus 91.53 1.00e-141 495.00
IUUC-Fca-036243 Felis catus 88.89 0.00e+00 677.00
IUUC-Fal-036600 Ficedula albicollis 87.86 1.00e-174 605.00
IUUC-Gmo-039665 Gadus morhua 71.27 1.00e-114 406.00
IUUC-Gga-040993 Gallus gallus 87.65 1.00e-176 612.00
IUUC-Gac-042342 Gasterosteus aculeatus 68.64 5.00e-130 457.00
IUUC-Gma-043822 Glycine max 39.62 2.00e-23 103.00
IUUC-Ggo-044859 Gorilla gorilla 98.56 4.00e-175 607.00
IUUC-Hsa-046822 Homo sapiens 93.80 0.00e+00 744.00
IUUC-Hvu-047141 Hordeum vulgare 34.65 3.00e-23 102.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 96.58 7.00e-159 552.00
IUUC-Lch-049946 Latimeria chalumnae 70.35 1.00e-139 489.00
IUUC-Lpe-051132 Leersia perrieri 33.08 8.00e-29 121.00
IUUC-Loc-052469 Lepisosteus oculatus 64.05 8.00e-136 477.00
IUUC-Laf-053979 Loxodonta africana 91.51 2.00e-180 625.00
IUUC-Mcc-055682 Macaca mulatta 93.80 0.00e+00 744.00
IUUC-Meu-056004 Macropus eugenii 75.89 6.00e-153 533.00
IUUC-Mtr-058392 Medicago truncatula 32.87 7.00e-30 124.00
IUUC-Mga-059466 Meleagris gallopavo 87.65 4.00e-176 610.00
IUUC-Mmr-061538 Microcebus murinus 75.28 2.00e-149 522.00
IUUC-Mdo-062122 Monodelphis domestica 89.60 0.00e+00 634.00
IUUC-Mmu-063176 Mus musculus 88.68 0.00e+00 686.00
IUUC-Mpu-065927 Mustela putorius furo 95.51 0.00e+00 681.00
IUUC-Mlu-067079 Myotis lucifugus 87.39 0.00e+00 699.00
IUUC-Nle-070180 Nomascus leucogenys 93.80 0.00e+00 744.00
IUUC-Opr-070847 Ochotona princeps 86.34 0.00e+00 637.00
IUUC-Ont-071846 Oreochromis niloticus 76.24 4.00e-145 508.00
IUUC-Oan-072783 Ornithorhynchus anatinus 83.13 2.00e-133 468.00
IUUC-Ocu-074527 Oryctolagus cuniculus 90.83 0.00e+00 721.00
IUUC-Olo-080484 Oryza longistaminata 35.42 3.00e-23 102.00
IUUC-Ome-081814 Oryza meridionalis 32.91 1.00e-28 120.00
IUUC-Opu-084176 Oryza punctata 32.75 2.00e-28 120.00
IUUC-Olu-087811 Ostreococcus lucimarinus 37.54 1.00e-46 179.00
IUUC-Oar-090348 Ovis aries 86.35 0.00e+00 685.00
IUUC-Ptr-091060 Pan troglodytes 93.80 0.00e+00 744.00
IUUC-Pan-091855 Papio anubis 86.53 0.00e+00 635.00
IUUC-Psi-093505 Pelodiscus sinensis 86.46 3.00e-175 607.00
IUUC-Pfo-097396 Poecilia formosa 74.81 9.00e-150 523.00
IUUC-Pab-098591 Pongo abelii 93.59 0.00e+00 741.00
IUUC-Pop-099661 Populus trichocarpa 33.83 1.00e-32 134.00
IUUC-Pca-101029 Procavia capensis 89.36 6.00e-179 620.00
IUUC-Ppe-101495 Prunus persica 31.92 6.00e-38 151.00
IUUC-Pva-102244 Pteropus vampyrus 81.62 0.00e+00 627.00
IUUC-Pgr-103562 Puccinia graminis 33.33 9.00e-02 32.30
IUUC-Rno-105861 Rattus norvegicus 86.97 0.00e+00 668.00
IUUC-Sha-107045 Sarcophilus harrisii 89.86 0.00e+00 635.00
IUUC-Smo-109325 Selaginella moellendorffii 36.14 1.00e-37 150.00
IUUC-Sit-110624 Setaria italica 34.27 3.00e-26 113.00
IUUC-Stu-112433 Solanum tuberosum 35.17 4.00e-33 135.00
IUUC-Sar-113169 Sorex araneus 87.25 5.00e-141 494.00
IUUC-Sbi-114305 Sorghum bicolor 35.96 3.00e-27 115.00
IUUC-Ssc-115766 Sus scrofa 86.97 0.00e+00 662.00
IUUC-Tgu-116469 Taeniopygia guttata 87.32 3.00e-138 484.00
IUUC-Tru-117732 Takifugu rubripes 76.56 3.00e-145 508.00
IUUC-Tsy-119624 Tarsius syrichta 79.66 6.00e-177 613.00
IUUC-Tni-119852 Tetraodon nigroviridis 70.82 1.00e-135 476.00
IUUC-Tca-121865 Theobroma cacao 33.42 1.00e-37 150.00
IUUC-Tae-125925 Triticum aestivum 35.87 4.00e-26 112.00
IUUC-Tur-126237 Triticum urartu 33.11 6.00e-23 101.00
IUUC-Tbe-128148 Tupaia belangeri 81.96 8.00e-159 553.00
IUUC-Ttr-128793 Tursiops truncatus 86.11 0.00e+00 647.00
IUUC-Vpa-130625 Vicugna pacos 77.67 2.00e-145 508.00
IUUC-Vvi-131312 Vitis vinifera 34.43 1.00e-35 144.00
IUUC-Xtr-131790 Xenopus tropicalis 80.67 2.00e-156 545.00
IUUC-Xma-133377 Xiphophorus maculatus 75.06 2.00e-148 519.00
Created Date 25-Jun-2017

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