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Tag Content
UUCD2 ID IUUC-Mcc-055819
UUCD1 version UUC-MaM-00139
Ensembl Protein ID ENSMMUP00000025498.3
UniProt Accession F6SV59; F6SV59_MACMU
Genbank Protein ID ENSMMUP00000025498
Protein Name Uncharacterized protein
Genbank Nucleotide ID JSUE03000945
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMMUG00000019406.3 ENSMMUT00000027255.3 ENSMMUP00000025498.3
ENSMMUG00000019406.3 ENSMMUT00000066791.1 ENSMMUP00000043364.1
ENSMMUG00000019406.3 ENSMMUT00000053281.1 ENSMMUP00000045702.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.40e-46 152.9 193 227
UBD/Beta-Prp 3.00e-79 267.4 106 309
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 193  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 227
           8*******9659955588999***********876 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 106  LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 193
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 194  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 280
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 281  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 309
           ***************************97 PP
   
Organism Macaca mulatta
Protein Sequence
(Fasta)
MGILKTDWFF QAGSCGGRTK LEPIAWRLRG AARSVAALKR PVAAMIEQQK RKGPELPLVP 60
VKRQRHELLL GAGSGPGAGQ QQATPGALLQ AGPPRCSSLQ APIMLLSGHE GEVYCCKFHP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mcc-055819|E3,WD_repeat;UBD,Beta-Prp|Macaca mulatta
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAACAAGAGA CTATCCGAGG GCAGTGCAAA TGGGTATATT GAAAACCGAT TGGTTCTTCC 60
AAGCTGGAAG TTGTGGAGGA AGGACTAAGC TGGAACCAAT TGCGTGGCGC CTGAGGGGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mcc-055819|E3,WD_repeat;UBD,Beta-Prp|Macaca mulatta
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0003723--F:RNA binding
GO:0008380--P:RNA splicing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 57.23 7.00e-120 423.00
IUUC-Aml-001428 Ailuropoda melanoleuca 99.12 0.00e+00 629.00
IUUC-Atr-003164 Amborella trichopoda 58.99 1.00e-121 429.00
IUUC-Apl-003447 Anas platyrhynchos 96.86 6.00e-162 563.00
IUUC-Aca-004270 Anolis carolinensis 84.17 2.00e-169 588.00
IUUC-Aly-005659 Arabidopsis lyrata 59.76 2.00e-124 438.00
IUUC-Ath-006764 Arabidopsis thaliana 59.16 5.00e-124 437.00
IUUC-Acl-008324 Aspergillus clavatus 47.80 1.00e-95 342.00
IUUC-Afl-008607 Aspergillus flavus 49.66 1.00e-89 322.00
IUUC-Afu-008998 Aspergillus fumigatus 47.51 2.00e-95 342.00
IUUC-Ani-009363 Aspergillus nidulans 49.05 1.00e-95 342.00
IUUC-Ang-009513 Aspergillus niger 48.51 5.00e-85 307.00
IUUC-Aor-010237 Aspergillus oryzae 48.09 2.00e-96 345.00
IUUC-Ate-010374 Aspergillus terreus 44.28 3.00e-83 301.00
IUUC-Ame-010728 Astyanax mexicanus 83.84 5.00e-172 596.00
IUUC-Bgr-012297 Blumeria graminis 46.15 2.00e-70 258.00
IUUC-Bta-012433 Bos taurus 94.41 0.00e+00 650.00
IUUC-Bci-013763 Botrytis cinerea 50.16 8.00e-95 340.00
IUUC-Bdi-014490 Brachypodium distachyon 58.92 2.00e-119 422.00
IUUC-Bol-016479 Brassica oleracea 61.86 4.00e-124 437.00
IUUC-Bra-017219 Brassica rapa 62.14 4.00e-124 437.00
IUUC-Cel-018512 Caenorhabditis elegans 56.04 9.00e-114 402.00
IUUC-Cja-019308 Callithrix jacchus 94.69 0.00e+00 654.00
IUUC-Cfa-020998 Canis familiaris 94.97 0.00e+00 656.00
IUUC-Cpo-021580 Cavia porcellus 97.77 0.00e+00 650.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 53.37 1.00e-107 383.00
IUUC-Csa-023456 Chlorocebus sabaeus 100.00 0.00e+00 661.00
IUUC-Cho-024644 Choloepus hoffmanni 99.35 3.00e-179 620.00
IUUC-Cin-025463 Ciona intestinalis 59.01 9.00e-127 446.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 45.61 5.00e-94 337.00
IUUC-Cne-026780 Cryptococcus neoformans 40.90 8.00e-67 247.00
IUUC-Dre-027671 Danio rerio 81.34 1.00e-176 612.00
IUUC-Dno-029769 Dasypus novemcinctus 94.97 0.00e+00 659.00
IUUC-Dor-030776 Dipodomys ordii 88.76 9.00e-85 306.00
IUUC-Dse-031316 Dothistroma septosporum 43.24 6.00e-87 313.00
IUUC-Dme-031756 Drosophila melanogaster 61.46 2.00e-124 438.00
IUUC-Ete-032753 Echinops telfairi 87.11 2.00e-164 571.00
IUUC-Eca-033979 Equus caballus 94.41 0.00e+00 650.00
IUUC-Eeu-034862 Erinaceus europaeus 99.28 4.00e-72 265.00
IUUC-Fca-036110 Felis catus 94.48 1.00e-158 552.00
IUUC-Fal-037648 Ficedula albicollis 96.77 2.00e-176 611.00
IUUC-Fox-037861 Fusarium oxysporum 45.95 4.00e-91 327.00
IUUC-Fso-038405 Fusarium solani 45.95 7.00e-91 327.00
IUUC-Gmo-039383 Gadus morhua 83.29 2.00e-172 598.00
IUUC-Ggr-040082 Gaeumannomyces graminis 44.14 2.00e-84 305.00
IUUC-Gga-040785 Gallus gallus 90.83 7.00e-180 623.00
IUUC-Gac-041645 Gasterosteus aculeatus 83.01 1.00e-169 588.00
IUUC-Gma-044329 Glycine max 60.44 3.00e-122 431.00
IUUC-Ggo-044800 Gorilla gorilla 90.35 1.00e-159 555.00
IUUC-Hsa-045918 Homo sapiens 100.00 0.00e+00 661.00
IUUC-Hvu-047342 Hordeum vulgare 57.23 2.00e-119 421.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 91.78 1.00e-111 395.00
IUUC-Kpa-049149 Komagataella pastoris 33.98 3.00e-36 145.00
IUUC-Lch-050395 Latimeria chalumnae 87.43 0.00e+00 656.00
IUUC-Lpe-051275 Leersia perrieri 57.83 1.00e-120 427.00
IUUC-Loc-052666 Lepisosteus oculatus 86.15 4.00e-173 600.00
IUUC-Lma-053129 Leptosphaeria maculans 43.40 2.00e-89 322.00
IUUC-Laf-054512 Loxodonta africana 93.84 0.00e+00 649.00
IUUC-Meu-056350 Macropus eugenii 81.72 6.00e-159 553.00
IUUC-Mor-057063 Magnaporthe oryzae 46.20 1.00e-91 329.00
IUUC-Mpo-057369 Magnaporthe poae 45.05 3.00e-85 308.00
IUUC-Mtr-058228 Medicago truncatula 60.19 9.00e-122 429.00
IUUC-Mla-059093 Melampsora laricipopulina 40.34 3.00e-70 258.00
IUUC-Mga-059719 Meleagris gallopavo 96.50 4.00e-178 616.00
IUUC-Mvi-060285 Microbotryum violaceum 40.06 2.00e-63 236.00
IUUC-Mmr-061685 Microcebus murinus 88.27 4.00e-170 590.00
IUUC-Mdo-062121 Monodelphis domestica 90.58 0.00e+00 635.00
IUUC-Mmu-063216 Mus musculus 94.41 0.00e+00 660.00
IUUC-Mac-065463 Musa acuminata 54.79 8.00e-111 393.00
IUUC-Mpu-066390 Mustela putorius furo 95.81 0.00e+00 665.00
IUUC-Mlu-066932 Myotis lucifugus 94.15 3.00e-180 624.00
IUUC-Nfi-068509 Neosartorya fischeri 47.51 4.00e-95 341.00
IUUC-Ncr-068870 Neurospora crassa 47.34 2.00e-92 332.00
IUUC-Nle-069539 Nomascus leucogenys 96.75 0.00e+00 681.00
IUUC-Opr-070555 Ochotona princeps 82.12 2.00e-166 577.00
IUUC-Ont-071490 Oreochromis niloticus 82.78 6.00e-170 589.00
IUUC-Oan-073044 Ornithorhynchus anatinus 79.29 1.00e-153 535.00
IUUC-Ocu-073764 Oryctolagus cuniculus 91.75 0.00e+00 711.00
IUUC-Oba-075704 Oryza barthii 58.51 1.00e-120 426.00
IUUC-Obr-076455 Oryza brachyantha 58.82 1.00e-120 426.00
IUUC-Ogl-077382 Oryza glaberrima 58.82 7.00e-121 426.00
IUUC-Ogu-078739 Oryza glumaepatula 58.51 8.00e-121 426.00
IUUC-Oin-079072 Oryza indica 58.51 8.00e-121 426.00
IUUC-Olo-080809 Oryza longistaminata 58.51 8.00e-121 426.00
IUUC-Ome-081677 Oryza meridionalis 58.51 2.00e-120 425.00
IUUC-Oni-082937 Oryza nivara 58.51 8.00e-121 426.00
IUUC-Opu-083510 Oryza punctata 58.51 8.00e-121 426.00
IUUC-Oru-084360 Oryza rufipogon 58.51 1.00e-120 426.00
IUUC-Osa-085640 Oryza sativa 58.51 1.00e-120 426.00
IUUC-Ola-086504 Oryzias latipes 82.45 3.00e-171 594.00
IUUC-Olu-087869 Ostreococcus lucimarinus 41.64 6.00e-63 234.00
IUUC-Oga-088773 Otolemur garnettii 94.41 0.00e+00 654.00
IUUC-Oar-089677 Ovis aries 93.63 0.00e+00 645.00
IUUC-Ptr-090724 Pan troglodytes 99.71 0.00e+00 630.00
IUUC-Pan-092683 Papio anubis 100.00 0.00e+00 661.00
IUUC-Psi-093415 Pelodiscus sinensis 97.72 7.00e-176 609.00
IUUC-Pma-094562 Petromyzon marinus 76.54 8.00e-170 589.00
IUUC-Pno-095014 Phaeosphaeria nodorum 46.93 2.00e-89 322.00
IUUC-Ppa-095822 Physcomitrella patens 57.87 1.00e-121 429.00
IUUC-Pfo-096579 Poecilia formosa 82.45 2.00e-168 584.00
IUUC-Pab-098313 Pongo abelii 100.00 0.00e+00 661.00
IUUC-Pop-099747 Populus trichocarpa 61.49 2.00e-123 434.00
IUUC-Pca-100871 Procavia capensis 85.00 1.00e-129 455.00
IUUC-Ppe-101389 Prunus persica 62.14 4.00e-124 437.00
IUUC-Pva-102468 Pteropus vampyrus 80.17 3.00e-149 520.00
IUUC-Pgr-103523 Puccinia graminis 39.73 3.00e-73 268.00
IUUC-Ptt-103930 Puccinia triticina 38.83 5.00e-73 268.00
IUUC-Pte-104299 Pyrenophora teres 46.33 8.00e-95 340.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 46.63 2.00e-94 339.00
IUUC-Rno-105796 Rattus norvegicus 90.25 0.00e+00 674.00
IUUC-Sha-107191 Sarcophilus harrisii 90.58 0.00e+00 635.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 37.92 2.00e-63 235.00
IUUC-Spo-108249 Schizosaccharomyces pombe 43.40 2.00e-80 292.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 49.53 5.00e-94 337.00
IUUC-Sit-110805 Setaria italica 57.59 1.00e-119 423.00
IUUC-Sly-111567 Solanum lycopersicum 61.71 2.00e-125 441.00
IUUC-Stu-112562 Solanum tuberosum 61.71 3.00e-126 444.00
IUUC-Sar-112991 Sorex araneus 98.63 2.00e-120 424.00
IUUC-Sbi-114010 Sorghum bicolor 58.58 9.00e-119 419.00
IUUC-Sre-114947 Sporisorium reilianum 42.99 4.00e-74 271.00
IUUC-Ssc-115371 Sus scrofa 94.41 0.00e+00 650.00
IUUC-Tgu-117429 Taeniopygia guttata 94.14 5.00e-174 603.00
IUUC-Tru-118081 Takifugu rubripes 83.06 3.00e-171 594.00
IUUC-Tsy-119101 Tarsius syrichta 82.40 3.00e-158 550.00
IUUC-Tni-120532 Tetraodon nigroviridis 83.01 2.00e-169 587.00
IUUC-Tca-121373 Theobroma cacao 59.64 9.00e-125 439.00
IUUC-Tre-122050 Trichoderma reesei 45.31 6.00e-90 323.00
IUUC-Tvi-122394 Trichoderma virens 42.77 3.00e-84 305.00
IUUC-Tae-124661 Triticum aestivum 57.36 4.00e-119 421.00
IUUC-Tme-126998 Tuber melanosporum 51.46 3.00e-94 338.00
IUUC-Tbe-128032 Tupaia belangeri 94.13 0.00e+00 654.00
IUUC-Ttr-129102 Tursiops truncatus 83.80 1.00e-158 552.00
IUUC-Uma-129363 Ustilago maydis 43.61 1.00e-77 283.00
IUUC-Vda-129891 Verticillium dahliae 45.92 2.00e-93 335.00
IUUC-Vpa-130827 Vicugna pacos 93.85 0.00e+00 646.00
IUUC-Vvi-131202 Vitis vinifera 56.57 4.00e-123 434.00
IUUC-Xtr-132769 Xenopus tropicalis 85.52 3.00e-171 594.00
IUUC-Xma-133147 Xiphophorus maculatus 82.45 3.00e-168 583.00
IUUC-Yli-134352 Yarrowia lipolytica 33.77 3.00e-36 145.00
IUUC-Zma-135294 Zea mays 58.58 2.00e-118 418.00
Created Date 25-Jun-2017

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