iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093415

Ensembl Protein ID

ENSPSIP00000019258.1

UniProt Accession

K7GG47; K7GG47_PELSI

Genbank Protein ID

ENSPSIP00000019258

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01117670

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000017063.1	ENSPSIT00000019348.1	ENSPSIP00000019258.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-45	151.7	120	154
UBD/Beta-Prp	3.00e-80	269.6	33	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 120  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 154
           8*******9659955588999***********886 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g +l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 33   LSGHEGEVYCCKFHPNGATLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 120
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 121  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 207
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++riWd+r
   Q: 208  SVTGLSLSSEGSYLLSNAMDNTVRIWDVR 236
           ***************************98 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

GGGGGGGGGP GRGGPLNSGP PRCSSLQAPI MLLSGHEGEV YCCKFHPNGA TLASAGFDRL 60
ILLWNVYGDC DNYATLKGHS GAVMELHYNT DGSMLFSAST DKTVAVWDSE TGERVKRLKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGGGGGG GGGGGGGGGG GGGAGGCGCG ACGNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.90	5.00e-119	420.00
IUUC-Aml-001428	Ailuropoda melanoleuca	97.95	4.00e-168	583.00
IUUC-Atr-003164	Amborella trichopoda	60.00	1.00e-121	429.00
IUUC-Apl-003447	Anas platyrhynchos	98.95	3.00e-163	566.00
IUUC-Aca-004270	Anolis carolinensis	91.91	3.00e-169	587.00
IUUC-Aly-005659	Arabidopsis lyrata	61.61	3.00e-123	434.00
IUUC-Ath-006764	Arabidopsis thaliana	60.97	6.00e-123	433.00
IUUC-Acl-008324	Aspergillus clavatus	49.03	1.00e-92	333.00
IUUC-Afl-008607	Aspergillus flavus	49.33	7.00e-89	320.00
IUUC-Afu-008998	Aspergillus fumigatus	48.70	1.00e-92	332.00
IUUC-Ani-009363	Aspergillus nidulans	48.70	5.00e-94	337.00
IUUC-Ang-009513	Aspergillus niger	48.18	3.00e-84	305.00
IUUC-Aor-010237	Aspergillus oryzae	50.00	6.00e-94	337.00
IUUC-Ate-010374	Aspergillus terreus	45.45	2.00e-81	295.00
IUUC-Ame-010728	Astyanax mexicanus	91.61	4.00e-168	583.00
IUUC-Bgr-012297	Blumeria graminis	46.52	3.00e-70	258.00
IUUC-Bta-012433	Bos taurus	98.05	7.00e-176	609.00
IUUC-Bci-013763	Botrytis cinerea	50.81	6.00e-94	337.00
IUUC-Bdi-014490	Brachypodium distachyon	59.22	1.00e-118	419.00
IUUC-Bol-016479	Brassica oleracea	61.22	2.00e-123	434.00
IUUC-Bra-017219	Brassica rapa	61.49	3.00e-123	434.00
IUUC-Cel-018512	Caenorhabditis elegans	58.17	1.00e-112	399.00
IUUC-Cja-019308	Callithrix jacchus	97.73	2.00e-177	614.00
IUUC-Cfa-020998	Canis familiaris	98.06	2.00e-177	614.00
IUUC-Cpo-021580	Cavia porcellus	98.05	3.00e-176	610.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	55.41	2.00e-107	382.00
IUUC-Csa-023456	Chlorocebus sabaeus	97.73	3.00e-177	613.00
IUUC-Cho-024644	Choloepus hoffmanni	97.74	1.00e-177	614.00
IUUC-Cin-025463	Ciona intestinalis	63.34	2.00e-125	441.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	48.87	1.00e-93	336.00
IUUC-Cne-026780	Cryptococcus neoformans	42.72	2.00e-67	248.00
IUUC-Dre-027671	Danio rerio	90.32	2.00e-175	607.00
IUUC-Dno-029769	Dasypus novemcinctus	97.44	5.00e-179	619.00
IUUC-Dor-030776	Dipodomys ordii	99.22	4.00e-75	274.00
IUUC-Dse-031316	Dothistroma septosporum	44.59	5.00e-85	307.00
IUUC-Dme-031756	Drosophila melanogaster	61.86	6.00e-124	436.00
IUUC-Ete-032753	Echinops telfairi	90.55	6.00e-153	533.00
IUUC-Eca-033979	Equus caballus	98.05	7.00e-176	609.00
IUUC-Eeu-034862	Erinaceus europaeus	97.12	4.00e-71	261.00
IUUC-Fca-036110	Felis catus	98.46	7.00e-147	512.00
IUUC-Fal-037648	Ficedula albicollis	98.71	7.00e-178	615.00
IUUC-Fox-037861	Fusarium oxysporum	46.60	4.00e-91	327.00
IUUC-Fso-038405	Fusarium solani	46.60	4.00e-91	327.00
IUUC-Gmo-039383	Gadus morhua	92.26	7.00e-170	589.00
IUUC-Ggr-040082	Gaeumannomyces graminis	45.31	3.00e-81	295.00
IUUC-Gga-040785	Gallus gallus	98.72	4.00e-179	620.00
IUUC-Gac-041645	Gasterosteus aculeatus	92.26	2.00e-169	587.00
IUUC-Gma-044329	Glycine max	60.65	1.00e-121	428.00
IUUC-Ggo-044800	Gorilla gorilla	86.58	1.00e-144	505.00
IUUC-Hsa-045918	Homo sapiens	97.73	3.00e-177	613.00
IUUC-Hvu-047342	Hordeum vulgare	58.90	1.00e-118	418.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	98.82	1.00e-100	358.00
IUUC-Kpa-049149	Komagataella pastoris	34.31	2.00e-36	145.00
IUUC-Lch-050395	Latimeria chalumnae	92.33	2.00e-180	624.00
IUUC-Lpe-051275	Leersia perrieri	59.55	2.00e-119	422.00
IUUC-Loc-052666	Lepisosteus oculatus	92.97	5.00e-167	579.00
IUUC-Lma-053129	Leptosphaeria maculans	44.73	3.00e-85	308.00
IUUC-Laf-054512	Loxodonta africana	98.05	8.00e-176	608.00
IUUC-Mcc-055819	Macaca mulatta	97.73	3.00e-177	613.00
IUUC-Meu-056350	Macropus eugenii	87.62	2.00e-150	525.00
IUUC-Mor-057063	Magnaporthe oryzae	48.09	8.00e-91	326.00
IUUC-Mpo-057369	Magnaporthe poae	46.28	6.00e-82	296.00
IUUC-Mtr-058228	Medicago truncatula	59.68	5.00e-121	427.00
IUUC-Mla-059093	Melampsora laricipopulina	43.57	2.00e-69	255.00
IUUC-Mga-059719	Meleagris gallopavo	98.72	4.00e-179	619.00
IUUC-Mvi-060285	Microbotryum violaceum	40.00	8.00e-63	233.00
IUUC-Mmr-061685	Microcebus murinus	90.94	3.00e-158	550.00
IUUC-Mdo-062121	Monodelphis domestica	98.05	1.00e-174	605.00
IUUC-Mmu-063216	Mus musculus	97.44	8.00e-179	619.00
IUUC-Mac-065463	Musa acuminata	55.99	9.00e-109	385.00
IUUC-Mpu-066390	Mustela putorius furo	97.44	5.00e-179	619.00
IUUC-Mlu-066932	Myotis lucifugus	97.94	1.00e-166	578.00
IUUC-Nfi-068509	Neosartorya fischeri	49.03	7.00e-93	333.00
IUUC-Ncr-068870	Neurospora crassa	48.54	5.00e-92	330.00
IUUC-Nle-069539	Nomascus leucogenys	97.73	2.00e-177	614.00
IUUC-Opr-070555	Ochotona princeps	84.69	5.00e-155	540.00
IUUC-Ont-071490	Oreochromis niloticus	90.71	6.00e-167	579.00
IUUC-Oan-073044	Ornithorhynchus anatinus	85.94	5.00e-147	513.00
IUUC-Ocu-073764	Oryctolagus cuniculus	97.44	2.00e-179	620.00
IUUC-Oba-075704	Oryza barthii	59.55	2.00e-119	421.00
IUUC-Obr-076455	Oryza brachyantha	59.87	3.00e-119	421.00
IUUC-Ogl-077382	Oryza glaberrima	59.87	1.00e-119	422.00
IUUC-Ogu-078739	Oryza glumaepatula	59.55	2.00e-119	421.00
IUUC-Oin-079072	Oryza indica	59.55	2.00e-119	421.00
IUUC-Olo-080809	Oryza longistaminata	59.55	2.00e-119	421.00
IUUC-Ome-081677	Oryza meridionalis	59.55	4.00e-119	420.00
IUUC-Oni-082937	Oryza nivara	59.55	2.00e-119	421.00
IUUC-Opu-083510	Oryza punctata	59.55	2.00e-119	421.00
IUUC-Oru-084360	Oryza rufipogon	59.55	3.00e-119	421.00
IUUC-Osa-085640	Oryza sativa	59.55	3.00e-119	421.00
IUUC-Ola-086504	Oryzias latipes	90.97	1.00e-168	585.00
IUUC-Olu-087869	Ostreococcus lucimarinus	42.43	1.00e-63	236.00
IUUC-Oga-088773	Otolemur garnettii	97.73	4.00e-177	613.00
IUUC-Oar-089677	Ovis aries	97.10	2.00e-174	604.00
IUUC-Ptr-090724	Pan troglodytes	97.62	3.00e-168	584.00
IUUC-Pan-092683	Papio anubis	97.73	3.00e-177	613.00
IUUC-Pma-094562	Petromyzon marinus	82.43	6.00e-164	569.00
IUUC-Pno-095014	Phaeosphaeria nodorum	47.99	5.00e-87	314.00
IUUC-Ppa-095822	Physcomitrella patens	62.14	3.00e-121	427.00
IUUC-Pfo-096579	Poecilia formosa	91.29	3.00e-168	583.00
IUUC-Pab-098313	Pongo abelii	97.73	3.00e-177	613.00
IUUC-Pop-099747	Populus trichocarpa	61.09	5.00e-123	433.00
IUUC-Pca-100871	Procavia capensis	83.57	3.00e-128	450.00
IUUC-Ppe-101389	Prunus persica	61.94	1.00e-123	435.00
IUUC-Pva-102468	Pteropus vampyrus	82.08	2.00e-137	481.00
IUUC-Pgr-103523	Puccinia graminis	42.63	1.00e-72	266.00
IUUC-Ptt-103930	Puccinia triticina	42.32	2.00e-72	265.00
IUUC-Pte-104299	Pyrenophora teres	47.92	3.00e-92	331.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	49.19	2.00e-92	332.00
IUUC-Rno-105796	Rattus norvegicus	97.74	2.00e-177	614.00
IUUC-Sha-107191	Sarcophilus harrisii	98.05	1.00e-174	605.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.26	6.00e-64	237.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.79	2.00e-79	288.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	49.84	4.00e-93	334.00
IUUC-Sit-110805	Setaria italica	58.58	3.00e-118	418.00
IUUC-Sly-111567	Solanum lycopersicum	62.90	2.00e-125	441.00
IUUC-Stu-112562	Solanum tuberosum	62.90	2.00e-126	444.00
IUUC-Sar-112991	Sorex araneus	96.35	7.00e-119	419.00
IUUC-Sbi-114010	Sorghum bicolor	58.58	2.00e-118	418.00
IUUC-Sre-114947	Sporisorium reilianum	42.68	1.00e-73	269.00
IUUC-Ssc-115371	Sus scrofa	98.05	7.00e-176	609.00
IUUC-Tgu-117429	Taeniopygia guttata	96.09	2.00e-175	607.00
IUUC-Tru-118081	Takifugu rubripes	91.69	2.00e-170	590.00
IUUC-Tsy-119101	Tarsius syrichta	84.79	6.00e-148	516.00
IUUC-Tni-120532	Tetraodon nigroviridis	91.64	5.00e-169	586.00
IUUC-Tca-121373	Theobroma cacao	61.94	3.00e-124	437.00
IUUC-Tre-122050	Trichoderma reesei	45.95	4.00e-90	324.00
IUUC-Tvi-122394	Trichoderma virens	46.08	3.00e-84	304.00
IUUC-Tae-124661	Triticum aestivum	59.03	3.00e-118	417.00
IUUC-Tme-126998	Tuber melanosporum	51.13	3.00e-94	338.00
IUUC-Tbe-128032	Tupaia belangeri	98.06	2.00e-177	614.00
IUUC-Ttr-129102	Tursiops truncatus	86.64	4.00e-148	516.00
IUUC-Uma-129363	Ustilago maydis	43.30	7.00e-77	280.00
IUUC-Vda-129891	Verticillium dahliae	50.16	1.00e-92	332.00
IUUC-Vpa-130827	Vicugna pacos	97.39	5.00e-175	606.00
IUUC-Vvi-131202	Vitis vinifera	60.65	9.00e-123	432.00
IUUC-Xtr-132769	Xenopus tropicalis	93.42	2.00e-164	571.00
IUUC-Xma-133147	Xiphophorus maculatus	91.29	6.00e-168	582.00
IUUC-Yli-134352	Yarrowia lipolytica	34.11	3.00e-36	145.00
IUUC-Zma-135294	Zea mays	58.58	4.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence