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Tag Content
UUCD2 ID IUUC-Tgu-117429
UUCD1 version UUC-TaG-00056
Ensembl Protein ID ENSTGUP00000000832.1
UniProt Accession H0YRC3; H0YRC3_TAEGU
Genbank Protein ID ENSTGUP00000000832
Protein Name Uncharacterized protein
Genbank Nucleotide ID ABQF01058729
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTGUG00000000812.1 ENSTGUT00000000843.1 ENSTGUP00000000832.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-41 138.6 172 206
UBD/Beta-Prp 1.00e-62 211.9 85 286
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 172  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 206
           8*******9659955588999***********886 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++ + tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 85   LSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYgDCDNFATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 172
           8*******************************87669***********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++ + t  +  +
   Q: 173  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-L-TTPCGHA 257
           *****************************************7..6*******************************997.4.4445555 PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
           +   + +s+++ +++s ++D+++riWd+r
   Q: 258  TGDGLSLSSEGSYVLSNAMDNTVRIWDIR 286
           6677888899*****************97 PP
   
Organism Taeniopygia guttata
Protein Sequence
(Fasta)
ATPSPPPGPV PGTASRGLGA AAPGPAAAPA PGPDLPLVPA PAKRPRHDLP GAPGTGGAGG 60
QPAAGALLQA GPPRCSSLQA PIMLLSGHEG EVYCCKFHPN GNTLASAGFD RLILLWNVYG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Tgu-117429|E3,WD_repeat;UBD,Beta-Prp|Taeniopygia guttata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCACACCGT CCCCACCTCC TGGCCCCGTG CCAGGCACGG CTTCCCGTGG GCTCGGAGCC 60
GCTGCCCCAG CGGGGCCGCC CCTGCCCCCG CCCGCAGAGG CTCCAGGGGT TCGGGTGGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Tgu-117429|E3,WD_repeat;UBD,Beta-Prp|Taeniopygia guttata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 57.42 2.00e-112 398.00
IUUC-Aml-001428 Ailuropoda melanoleuca 88.52 2.00e-159 553.00
IUUC-Atr-003164 Amborella trichopoda 58.99 8.00e-116 409.00
IUUC-Apl-003447 Anas platyrhynchos 96.17 1.00e-155 541.00
IUUC-Aca-004270 Anolis carolinensis 89.61 5.00e-164 569.00
IUUC-Aly-005659 Arabidopsis lyrata 61.49 2.00e-117 414.00
IUUC-Ath-006764 Arabidopsis thaliana 60.84 5.00e-117 413.00
IUUC-Acl-008324 Aspergillus clavatus 47.45 1.00e-85 309.00
IUUC-Afl-008607 Aspergillus flavus 47.65 1.00e-81 295.00
IUUC-Afu-008998 Aspergillus fumigatus 45.86 8.00e-86 310.00
IUUC-Ani-009363 Aspergillus nidulans 47.13 6.00e-87 313.00
IUUC-Ang-009513 Aspergillus niger 46.86 2.00e-77 282.00
IUUC-Aor-010237 Aspergillus oryzae 46.75 7.00e-87 313.00
IUUC-Ate-010374 Aspergillus terreus 43.95 4.00e-74 271.00
IUUC-Ame-010728 Astyanax mexicanus 83.00 1.00e-163 568.00
IUUC-Bgr-012297 Blumeria graminis 45.42 5.00e-64 237.00
IUUC-Bta-012433 Bos taurus 86.57 7.00e-167 579.00
IUUC-Bci-013763 Botrytis cinerea 49.84 1.00e-87 315.00
IUUC-Bdi-014490 Brachypodium distachyon 57.74 3.00e-112 397.00
IUUC-Bol-016479 Brassica oleracea 60.90 1.00e-117 415.00
IUUC-Bra-017219 Brassica rapa 61.17 2.00e-117 415.00
IUUC-Cel-018512 Caenorhabditis elegans 57.56 3.00e-107 380.00
IUUC-Cja-019308 Callithrix jacchus 94.17 4.00e-168 583.00
IUUC-Cfa-020998 Canis familiaris 87.14 2.00e-168 584.00
IUUC-Cpo-021580 Cavia porcellus 89.43 1.00e-167 582.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 53.18 7.00e-101 359.00
IUUC-Csa-023456 Chlorocebus sabaeus 88.76 1.00e-168 584.00
IUUC-Cho-024644 Choloepus hoffmanni 94.19 3.00e-168 583.00
IUUC-Cin-025463 Ciona intestinalis 58.91 6.00e-123 433.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 47.25 3.00e-87 314.00
IUUC-Cne-026780 Cryptococcus neoformans 41.46 1.00e-60 226.00
IUUC-Dre-027671 Danio rerio 80.69 6.00e-168 582.00
IUUC-Dno-029769 Dasypus novemcinctus 88.00 2.00e-171 594.00
IUUC-Dor-030776 Dipodomys ordii 82.35 2.00e-75 275.00
IUUC-Dse-031316 Dothistroma septosporum 42.95 2.00e-77 281.00
IUUC-Dme-031756 Drosophila melanogaster 57.43 4.00e-118 417.00
IUUC-Ete-032753 Echinops telfairi 83.29 5.00e-146 509.00
IUUC-Eca-033979 Equus caballus 86.57 7.00e-167 579.00
IUUC-Eeu-034862 Erinaceus europaeus 89.93 2.00e-62 232.00
IUUC-Fca-036110 Felis catus 86.00 3.00e-138 483.00
IUUC-Fal-037648 Ficedula albicollis 96.77 5.00e-171 593.00
IUUC-Fox-037861 Fusarium oxysporum 45.63 5.00e-85 307.00
IUUC-Fso-038405 Fusarium solani 45.95 1.00e-85 308.00
IUUC-Gmo-039383 Gadus morhua 82.71 7.00e-164 569.00
IUUC-Ggr-040082 Gaeumannomyces graminis 44.13 2.00e-75 275.00
IUUC-Gga-040785 Gallus gallus 93.37 1.00e-177 614.00
IUUC-Gac-041645 Gasterosteus aculeatus 82.18 2.00e-162 564.00
IUUC-Gma-043672 Glycine max 60.19 2.00e-115 408.00
IUUC-Ggo-044800 Gorilla gorilla 78.92 9.00e-138 482.00
IUUC-Hsa-045918 Homo sapiens 88.76 1.00e-168 584.00
IUUC-Hvu-047342 Hordeum vulgare 57.23 4.00e-112 397.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 85.31 3.00e-100 357.00
IUUC-Kpa-049149 Komagataella pastoris 32.24 5.00e-33 134.00
IUUC-Lch-050395 Latimeria chalumnae 84.30 3.00e-174 603.00
IUUC-Lpe-051275 Leersia perrieri 58.25 6.00e-113 400.00
IUUC-Loc-052666 Lepisosteus oculatus 83.57 2.00e-164 571.00
IUUC-Lma-053129 Leptosphaeria maculans 43.31 1.00e-79 289.00
IUUC-Laf-054512 Loxodonta africana 89.91 9.00e-169 585.00
IUUC-Mcc-055819 Macaca mulatta 88.76 2.00e-168 584.00
IUUC-Meu-056350 Macropus eugenii 78.47 7.00e-142 496.00
IUUC-Mor-057063 Magnaporthe oryzae 46.98 3.00e-84 304.00
IUUC-Mpo-057369 Magnaporthe poae 45.08 5.00e-76 277.00
IUUC-Mtr-058228 Medicago truncatula 59.22 6.00e-115 406.00
IUUC-Mla-059093 Melampsora laricipopulina 42.32 2.00e-62 232.00
IUUC-Mga-059719 Meleagris gallopavo 95.86 2.00e-171 594.00
IUUC-Mvi-060285 Microbotryum violaceum 37.85 3.00e-55 208.00
IUUC-Mmr-061685 Microcebus murinus 80.57 6.00e-149 519.00
IUUC-Mdo-062121 Monodelphis domestica 87.54 8.00e-166 575.00
IUUC-Mmu-063216 Mus musculus 88.57 3.00e-172 597.00
IUUC-Mac-065463 Musa acuminata 55.16 9.00e-103 366.00
IUUC-Mpu-066390 Mustela putorius furo 88.29 2.00e-171 594.00
IUUC-Mlu-066932 Myotis lucifugus 85.93 4.00e-158 550.00
IUUC-Nfi-068509 Neosartorya fischeri 47.13 1.00e-85 309.00
IUUC-Ncr-068870 Neurospora crassa 47.25 5.00e-86 310.00
IUUC-Nle-069539 Nomascus leucogenys 88.76 1.00e-168 585.00
IUUC-Opr-070555 Ochotona princeps 77.14 3.00e-152 530.00
IUUC-Ont-071490 Oreochromis niloticus 81.09 8.00e-162 562.00
IUUC-Oan-073044 Ornithorhynchus anatinus 83.71 5.00e-138 483.00
IUUC-Ocu-073764 Oryctolagus cuniculus 88.00 6.00e-172 596.00
IUUC-Oba-075704 Oryza barthii 58.06 6.00e-113 399.00
IUUC-Obr-076455 Oryza brachyantha 58.39 1.00e-112 399.00
IUUC-Ogl-077382 Oryza glaberrima 58.39 4.00e-113 400.00
IUUC-Ogu-078739 Oryza glumaepatula 58.06 4.00e-113 400.00
IUUC-Oin-079072 Oryza indica 58.06 4.00e-113 400.00
IUUC-Olo-080809 Oryza longistaminata 58.06 4.00e-113 400.00
IUUC-Ome-081677 Oryza meridionalis 58.06 2.00e-112 398.00
IUUC-Oni-082937 Oryza nivara 58.06 4.00e-113 400.00
IUUC-Opu-083510 Oryza punctata 58.06 4.00e-113 400.00
IUUC-Oru-084360 Oryza rufipogon 58.06 9.00e-113 399.00
IUUC-Osa-085640 Oryza sativa 58.06 8.00e-113 399.00
IUUC-Ola-086504 Oryzias latipes 80.69 8.00e-162 562.00
IUUC-Olu-087869 Ostreococcus lucimarinus 42.43 8.00e-59 219.00
IUUC-Oga-088773 Otolemur garnettii 86.57 4.00e-168 583.00
IUUC-Oar-089677 Ovis aries 85.84 2.00e-165 574.00
IUUC-Ptr-090724 Pan troglodytes 88.25 2.00e-159 554.00
IUUC-Pan-092683 Papio anubis 88.76 1.00e-168 584.00
IUUC-Psi-093415 Pelodiscus sinensis 96.09 7.00e-168 582.00
IUUC-Pma-094562 Petromyzon marinus 80.25 1.00e-156 545.00
IUUC-Pno-095014 Phaeosphaeria nodorum 45.82 1.00e-79 290.00
IUUC-Ppa-095822 Physcomitrella patens 61.49 1.00e-115 409.00
IUUC-Pfo-096579 Poecilia formosa 81.90 6.00e-162 562.00
IUUC-Pab-098313 Pongo abelii 88.76 1.00e-168 584.00
IUUC-Pop-099747 Populus trichocarpa 61.17 7.00e-118 416.00
IUUC-Pca-100871 Procavia capensis 79.64 3.00e-119 420.00
IUUC-Ppe-101389 Prunus persica 61.49 1.00e-117 415.00
IUUC-Pva-102468 Pteropus vampyrus 72.86 1.00e-128 452.00
IUUC-Pgr-103523 Puccinia graminis 39.60 2.00e-66 245.00
IUUC-Ptt-103930 Puccinia triticina 41.07 3.00e-66 244.00
IUUC-Pte-104299 Pyrenophora teres 46.18 3.00e-85 308.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 46.82 2.00e-85 308.00
IUUC-Rno-105796 Rattus norvegicus 87.14 2.00e-169 588.00
IUUC-Sha-107191 Sarcophilus harrisii 87.54 8.00e-166 575.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 36.91 7.00e-59 220.00
IUUC-Spo-108249 Schizosaccharomyces pombe 41.29 4.00e-72 264.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 48.89 6.00e-87 313.00
IUUC-Sit-110805 Setaria italica 57.74 1.00e-112 399.00
IUUC-Sly-111567 Solanum lycopersicum 62.78 2.00e-119 421.00
IUUC-Stu-112562 Solanum tuberosum 62.78 2.00e-120 424.00
IUUC-Sar-112991 Sorex araneus 91.78 4.00e-110 389.00
IUUC-Sbi-114010 Sorghum bicolor 57.74 1.00e-112 399.00
IUUC-Sre-114947 Sporisorium reilianum 41.74 3.00e-67 248.00
IUUC-Ssc-115371 Sus scrofa 86.57 7.00e-167 579.00
IUUC-Tru-118081 Takifugu rubripes 81.71 6.00e-162 563.00
IUUC-Tsy-119101 Tarsius syrichta 75.14 9.00e-139 485.00
IUUC-Tni-120532 Tetraodon nigroviridis 81.56 4.00e-161 560.00
IUUC-Tca-121373 Theobroma cacao 61.49 5.00e-118 416.00
IUUC-Tre-122050 Trichoderma reesei 45.31 2.00e-84 305.00
IUUC-Tvi-122394 Trichoderma virens 45.05 1.00e-78 286.00
IUUC-Tae-124661 Triticum aestivum 57.56 1.00e-111 395.00
IUUC-Tme-126998 Tuber melanosporum 49.51 1.00e-86 312.00
IUUC-Tbe-128032 Tupaia belangeri 86.86 2.00e-168 584.00
IUUC-Ttr-129102 Tursiops truncatus 77.14 2.00e-140 491.00
IUUC-Uma-129363 Ustilago maydis 42.37 2.00e-70 259.00
IUUC-Vda-129891 Verticillium dahliae 49.19 1.00e-86 312.00
IUUC-Vpa-130827 Vicugna pacos 85.71 8.00e-166 575.00
IUUC-Vvi-131202 Vitis vinifera 60.19 1.00e-116 412.00
IUUC-Xtr-132769 Xenopus tropicalis 82.10 2.00e-156 545.00
IUUC-Xma-133147 Xiphophorus maculatus 81.90 1.00e-161 561.00
IUUC-Yli-134352 Yarrowia lipolytica 32.55 1.00e-33 136.00
IUUC-Zma-135294 Zea mays 57.74 2.00e-112 398.00
Created Date 25-Jun-2017

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