iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040293

Ensembl Protein ID

ENSGALP00000024253.2

UniProt Accession

F1NQ45; F1NQ45_CHICK

Genbank Protein ID

ENSGALP00000024253

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC145954

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000015061.5	ENSGALT00000024299.4	ENSGALP00000024253.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-32	109.3	331	368
UBD/Beta-Prp	6.80e-47	160.4	280	489

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH   v++++f +  t+++s+++D  ik+WD+ tg ++
   Q: 331  GHGKAVRDICFnNAgTRFLSAAYDRYIKLWDTETGQCI 368
           8999*******6337********************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++   + cl+ t+ gh ++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 280  KQIHVWSGHTKGVSAVRLFPlSGHMLLSCSMDCKIKLWEVYGdRRCLR-TFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQC 367
           677888888888888888887778888888888888888754045555.8888888888888888888888888888888888888888 PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     
   Q: 368  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 454
           88886..4666677777777666677888888888888888888888888888888888888888888888888888888766666666 PP
   S: 258  ktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           k ++ +  ++++  +ls++++ l+  s d+++ i+
   Q: 455  KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIF 489
           77777777777777777777777777777776665 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MSAAIAALAS YGGSDSESDS EPEADAGPQR AVVLASRDAV LHLRPPPAAP PALPVDAAPE 60
VAVKEDVETG VHLDPAIKEV QYNPTYETMF APEFGPENPF RTQQMAAPRN MLSGYAEPAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACCCCCG CGCCAAGATG TCGGCGGCCA TCGCCGCGCT CGCTTCCTAC GGCGGCTCCG 60
ACTCGGAGTC CGATTCGGAG CCCGAAGCCG ATGCCGGTCC GCAGCGCGCC GTCGTGCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	49.81	2.00e-144	506.00
IUUC-Aml-002243	Ailuropoda melanoleuca	90.89	0.00e+00	740.00
IUUC-Atr-002502	Amborella trichopoda	50.75	2.00e-153	535.00
IUUC-Apl-003885	Anas platyrhynchos	98.28	0.00e+00	1054.00
IUUC-Aca-004854	Anolis carolinensis	72.17	0.00e+00	745.00
IUUC-Aly-006158	Arabidopsis lyrata	50.94	1.00e-155	542.00
IUUC-Ath-007474	Arabidopsis thaliana	51.87	5.00e-156	544.00
IUUC-Ago-007726	Ashbya gossypii	36.57	1.00e-69	257.00
IUUC-Acl-008220	Aspergillus clavatus	44.96	2.00e-132	466.00
IUUC-Afl-008473	Aspergillus flavus	44.49	3.00e-129	455.00
IUUC-Afu-008773	Aspergillus fumigatus	44.74	3.00e-131	461.00
IUUC-Ani-009323	Aspergillus nidulans	43.83	5.00e-118	417.00
IUUC-Ang-009851	Aspergillus niger	45.15	9.00e-131	460.00
IUUC-Aor-009950	Aspergillus oryzae	44.49	3.00e-129	455.00
IUUC-Ate-010372	Aspergillus terreus	45.17	1.00e-133	469.00
IUUC-Ame-011660	Astyanax mexicanus	84.64	0.00e+00	964.00
IUUC-Bgr-012230	Blumeria graminis	44.44	1.00e-124	439.00
IUUC-Bta-012568	Bos taurus	92.53	0.00e+00	1015.00
IUUC-Bci-013646	Botrytis cinerea	43.96	2.00e-120	425.00
IUUC-Bdi-014199	Brachypodium distachyon	50.19	6.00e-145	507.00
IUUC-Bol-015695	Brassica oleracea	51.79	2.00e-162	565.00
IUUC-Bra-017923	Brassica rapa	52.08	2.00e-162	565.00
IUUC-Cel-018535	Caenorhabditis elegans	50.86	3.00e-178	618.00
IUUC-Cja-019071	Callithrix jacchus	95.59	0.00e+00	1013.00
IUUC-Cfa-020559	Canis familiaris	92.53	0.00e+00	1014.00
IUUC-Cpo-022356	Cavia porcellus	92.17	0.00e+00	1011.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.90	1.00e-79	289.00
IUUC-Csa-023125	Chlorocebus sabaeus	92.71	0.00e+00	1015.00
IUUC-Cho-024676	Choloepus hoffmanni	87.60	0.00e+00	931.00
IUUC-Cin-025229	Ciona intestinalis	70.24	0.00e+00	769.00
IUUC-Csv-025868	Ciona savignyi	73.68	6.00e-43	164.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.30	2.00e-108	385.00
IUUC-Cne-026885	Cryptococcus neoformans	53.08	1.00e-152	533.00
IUUC-Dre-027631	Danio rerio	80.45	0.00e+00	972.00
IUUC-Dno-029815	Dasypus novemcinctus	82.67	0.00e+00	926.00
IUUC-Dor-031143	Dipodomys ordii	77.60	0.00e+00	830.00
IUUC-Dse-031520	Dothistroma septosporum	42.76	1.00e-96	346.00
IUUC-Dme-032050	Drosophila melanogaster	65.55	0.00e+00	744.00
IUUC-Ete-032866	Echinops telfairi	90.71	0.00e+00	988.00
IUUC-Eca-033384	Equus caballus	92.71	0.00e+00	1008.00
IUUC-Eeu-034471	Erinaceus europaeus	78.79	0.00e+00	780.00
IUUC-Fca-035727	Felis catus	92.71	0.00e+00	1016.00
IUUC-Fal-036774	Ficedula albicollis	97.13	0.00e+00	1052.00
IUUC-Fox-037951	Fusarium oxysporum	43.39	3.00e-124	438.00
IUUC-Fso-038287	Fusarium solani	43.38	2.00e-122	432.00
IUUC-Gmo-039670	Gadus morhua	84.10	0.00e+00	937.00
IUUC-Ggr-039764	Gaeumannomyces graminis	40.68	6.00e-115	407.00
IUUC-Gac-042159	Gasterosteus aculeatus	81.20	0.00e+00	983.00
IUUC-Gma-044299	Glycine max	63.34	2.00e-137	482.00
IUUC-Ggo-044864	Gorilla gorilla	92.35	0.00e+00	1013.00
IUUC-Hsa-046602	Homo sapiens	92.35	0.00e+00	1013.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	95.93	0.00e+00	803.00
IUUC-Kpa-049318	Komagataella pastoris	45.01	2.00e-96	346.00
IUUC-Lch-049796	Latimeria chalumnae	74.86	0.00e+00	832.00
IUUC-Lpe-051153	Leersia perrieri	51.15	9.00e-148	516.00
IUUC-Loc-052467	Lepisosteus oculatus	88.89	0.00e+00	981.00
IUUC-Lma-053107	Leptosphaeria maculans	48.40	1.00e-112	399.00
IUUC-Laf-053787	Loxodonta africana	92.01	0.00e+00	1035.00
IUUC-Mcc-055706	Macaca mulatta	92.71	0.00e+00	1014.00
IUUC-Meu-056757	Macropus eugenii	79.23	0.00e+00	627.00
IUUC-Mor-057079	Magnaporthe oryzae	39.63	3.00e-114	405.00
IUUC-Mpo-057533	Magnaporthe poae	47.32	1.00e-112	399.00
IUUC-Mtr-057950	Medicago truncatula	48.88	3.00e-150	525.00
IUUC-Mla-058910	Melampsora laricipopulina	47.20	3.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	99.42	0.00e+00	1068.00
IUUC-Mvi-060349	Microbotryum violaceum	57.68	3.00e-135	475.00
IUUC-Mmr-061209	Microcebus murinus	92.90	0.00e+00	1043.00
IUUC-Mdo-062118	Monodelphis domestica	95.78	0.00e+00	1045.00
IUUC-Mmu-063173	Mus musculus	92.17	0.00e+00	1012.00
IUUC-Mac-065080	Musa acuminata	51.66	4.00e-153	534.00
IUUC-Mpu-066659	Mustela putorius furo	92.53	0.00e+00	1016.00
IUUC-Mlu-067029	Myotis lucifugus	95.74	0.00e+00	1003.00
IUUC-Nfi-068334	Neosartorya fischeri	45.23	4.00e-133	468.00
IUUC-Ncr-068675	Neurospora crassa	39.18	6.00e-103	367.00
IUUC-Nle-070113	Nomascus leucogenys	88.68	0.00e+00	1016.00
IUUC-Opr-070685	Ochotona princeps	84.15	0.00e+00	952.00
IUUC-Ont-071680	Oreochromis niloticus	80.96	0.00e+00	975.00
IUUC-Oan-073573	Ornithorhynchus anatinus	95.42	0.00e+00	952.00
IUUC-Ocu-074074	Oryctolagus cuniculus	95.39	0.00e+00	1044.00
IUUC-Oba-075625	Oryza barthii	51.24	3.00e-147	514.00
IUUC-Obr-076510	Oryza brachyantha	50.57	2.00e-147	515.00
IUUC-Ogl-077275	Oryza glaberrima	51.24	3.00e-147	514.00
IUUC-Ogu-078563	Oryza glumaepatula	51.24	3.00e-147	514.00
IUUC-Oin-079898	Oryza indica	63.16	1.00e-134	473.00
IUUC-Olo-081080	Oryza longistaminata	51.61	1.00e-141	496.00
IUUC-Oni-083121	Oryza nivara	51.24	3.00e-147	514.00
IUUC-Opu-083329	Oryza punctata	50.57	6.00e-147	514.00
IUUC-Oru-084807	Oryza rufipogon	50.73	1.00e-128	453.00
IUUC-Osa-086039	Oryza sativa	51.33	7.00e-148	517.00
IUUC-Ola-087149	Oryzias latipes	84.25	0.00e+00	961.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.35	3.00e-122	431.00
IUUC-Oga-088359	Otolemur garnettii	92.53	0.00e+00	1014.00
IUUC-Oar-089390	Ovis aries	92.53	0.00e+00	1014.00
IUUC-Ptr-090894	Pan troglodytes	92.35	0.00e+00	1013.00
IUUC-Pan-092476	Papio anubis	92.71	0.00e+00	1014.00
IUUC-Psi-093527	Pelodiscus sinensis	94.19	0.00e+00	986.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.51	6.00e-112	397.00
IUUC-Ppa-095386	Physcomitrella patens	50.09	2.00e-154	538.00
IUUC-Pfo-096139	Poecilia formosa	81.77	0.00e+00	982.00
IUUC-Pab-097838	Pongo abelii	92.45	0.00e+00	894.00
IUUC-Pop-098945	Populus trichocarpa	51.13	7.00e-153	533.00
IUUC-Pca-100876	Procavia capensis	77.23	0.00e+00	855.00
IUUC-Ppe-101777	Prunus persica	50.85	3.00e-151	528.00
IUUC-Pva-102418	Pteropus vampyrus	92.53	0.00e+00	1014.00
IUUC-Pgr-103456	Puccinia graminis	50.92	4.00e-159	554.00
IUUC-Ptt-103731	Puccinia triticina	47.33	6.00e-146	510.00
IUUC-Pte-104386	Pyrenophora teres	50.12	1.00e-113	403.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.49	1.00e-113	403.00
IUUC-Rno-105694	Rattus norvegicus	87.61	0.00e+00	939.00
IUUC-Sce-106339	Saccharomyces cerevisiae	38.83	3.00e-76	278.00
IUUC-Sha-106709	Sarcophilus harrisii	95.97	0.00e+00	1044.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.31	3.00e-124	438.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.88	2.00e-122	432.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	45.28	1.00e-114	406.00
IUUC-Smo-108778	Selaginella moellendorffii	44.38	3.00e-126	445.00
IUUC-Sit-110446	Setaria italica	50.29	6.00e-147	513.00
IUUC-Sly-111330	Solanum lycopersicum	50.37	3.00e-151	528.00
IUUC-Stu-112610	Solanum tuberosum	50.28	7.00e-151	526.00
IUUC-Sar-113065	Sorex araneus	74.33	5.00e-121	427.00
IUUC-Sbi-114005	Sorghum bicolor	50.48	1.00e-146	513.00
IUUC-Sre-114988	Sporisorium reilianum	49.44	2.00e-156	545.00
IUUC-Ssc-115760	Sus scrofa	92.90	0.00e+00	1015.00
IUUC-Tgu-116493	Taeniopygia guttata	96.56	0.00e+00	1075.00
IUUC-Tru-118489	Takifugu rubripes	77.63	0.00e+00	949.00
IUUC-Tsy-119332	Tarsius syrichta	92.35	0.00e+00	1042.00
IUUC-Tni-120202	Tetraodon nigroviridis	80.69	0.00e+00	873.00
IUUC-Tca-121429	Theobroma cacao	49.35	2.00e-150	525.00
IUUC-Tre-122162	Trichoderma reesei	43.85	2.00e-123	435.00
IUUC-Tvi-122500	Trichoderma virens	43.24	3.00e-122	431.00
IUUC-Tae-125557	Triticum aestivum	49.52	7.00e-144	503.00
IUUC-Tur-126554	Triticum urartu	49.52	8.00e-142	496.00
IUUC-Tme-126919	Tuber melanosporum	46.42	4.00e-137	481.00
IUUC-Tbe-127968	Tupaia belangeri	90.02	0.00e+00	970.00
IUUC-Ttr-129215	Tursiops truncatus	88.14	0.00e+00	1009.00
IUUC-Uma-129622	Ustilago maydis	49.82	3.00e-158	551.00
IUUC-Vda-129750	Verticillium dahliae	44.23	4.00e-123	434.00
IUUC-Vpa-130617	Vicugna pacos	92.44	0.00e+00	954.00
IUUC-Vvi-131238	Vitis vinifera	61.52	1.00e-134	473.00
IUUC-Xtr-131865	Xenopus tropicalis	91.60	0.00e+00	1001.00
IUUC-Xma-133627	Xiphophorus maculatus	82.33	0.00e+00	984.00
IUUC-Yli-134390	Yarrowia lipolytica	45.34	2.00e-115	409.00
IUUC-Zma-135925	Zea mays	50.86	2.00e-142	499.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence