iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115997

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU571034

Gene Name

VPS18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004757.2	ENSSSCT00000005256.2	ENSSSCP00000005129.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.60e-06	26.5	853	947

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp......CgHvfhadCl.qkw.pglknssskefr........................................ 41
           Ca+C  df   pl+++      CgH+fhadCl q++ pgl+  ++k++r                                        
   Q: 853  CATC--DF---PLLNRpfylflCGHMFHADCLlQAVrPGLP--AYKQARleelqrklgavpppskgsarakeaeagvaasgpsreqlka 934
           9***..99...66555666668*********9788887777..8888777777777777777777777777888888888888888888 PP
   S: 42   .........CPlC 45
                    C++C
   Q: 935  dldelvaaeCVYC 947
           8888888888887 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MASILDEYED SLSRSAVLQP GCPSVGIPHS GYVNAQLEKE APIFSKQRID FTPSERITSL 60
VVSCNQLCMS LGKDTLLRID LGKANEPNHM ELGRKDDAKV HKMFLDHTGS HLLIALSSTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTA TCTTGGATGA ATATGAGGAC TCCCTGTCCC GCTCGGCCGT CTTGCAGCCC 60
GGCTGCCCCA GCGTGGGCAT CCCCCATTCG GGTAAGGAAA GTGAGGGCGC CGCTGCACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR

Pfam

PF00637--Clathrin
PF05131--Pep3_Vps18

Gene Ontology

GO:0005884--C:actin filament
GO:0030123--C:AP-3 adaptor complex
GO:0033263--C:CORVET complex
GO:0005769--C:early endosome
GO:0005768--C:endosome
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0005765--C:lysosomal membrane
GO:0030674--F:protein binding, bridging
GO:0007032--P:endosome organization
GO:0008333--P:endosome to lysosome transport
GO:0006886--P:intracellular protein transport
GO:0007040--P:lysosome organization
GO:0035542--P:regulation of SNARE complex assembly
GO:0006904--P:vesicle docking involved in exocytosis
GO:0046718--P:viral entry into host cell

KEGG

ssc:100153351

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	32.30	6.00e-109	388.00
IUUC-Aml-001240	Ailuropoda melanoleuca	97.33	0.00e+00	1884.00
IUUC-Atr-003125	Amborella trichopoda	32.91	2.00e-123	436.00
IUUC-Apl-004181	Anas platyrhynchos	72.79	0.00e+00	1486.00
IUUC-Aca-004437	Anolis carolinensis	72.38	0.00e+00	1461.00
IUUC-Aly-006046	Arabidopsis lyrata	33.57	1.00e-135	477.00
IUUC-Ath-006932	Arabidopsis thaliana	33.54	2.00e-134	473.00
IUUC-Ago-007800	Ashbya gossypii	23.42	1.00e-57	218.00
IUUC-Acl-008035	Aspergillus clavatus	32.08	3.00e-111	396.00
IUUC-Afl-008714	Aspergillus flavus	31.93	2.00e-109	389.00
IUUC-Afu-009063	Aspergillus fumigatus	33.16	2.00e-114	407.00
IUUC-Ani-009384	Aspergillus nidulans	32.81	2.00e-115	409.00
IUUC-Ang-009507	Aspergillus niger	32.79	7.00e-112	398.00
IUUC-Aor-010094	Aspergillus oryzae	31.93	1.00e-108	387.00
IUUC-Ate-010421	Aspergillus terreus	32.04	2.00e-96	347.00
IUUC-Ame-011797	Astyanax mexicanus	65.64	0.00e+00	1302.00
IUUC-Bgr-012107	Blumeria graminis	31.69	4.00e-109	389.00
IUUC-Bta-012339	Bos taurus	97.94	0.00e+00	1906.00
IUUC-Bci-013895	Botrytis cinerea	33.52	3.00e-120	426.00
IUUC-Bdi-014554	Brachypodium distachyon	34.39	6.00e-128	451.00
IUUC-Bol-015270	Brassica oleracea	33.71	1.00e-136	480.00
IUUC-Bra-017424	Brassica rapa	33.68	9.00e-132	464.00
IUUC-Cel-018455	Caenorhabditis elegans	26.13	1.00e-86	314.00
IUUC-Cja-019629	Callithrix jacchus	95.58	0.00e+00	1877.00
IUUC-Cfa-020425	Canis familiaris	97.43	0.00e+00	1880.00
IUUC-Cpo-021349	Cavia porcellus	95.38	0.00e+00	1841.00
IUUC-Cre-022799	Chlamydomonas reinhardtii	29.85	7.00e-28	119.00
IUUC-Csa-023559	Chlorocebus sabaeus	96.30	0.00e+00	1880.00
IUUC-Cho-024862	Choloepus hoffmanni	89.11	0.00e+00	1396.00
IUUC-Cin-025599	Ciona intestinalis	41.93	2.00e-176	612.00
IUUC-Csv-026152	Ciona savignyi	42.44	0.00e+00	759.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	32.90	6.00e-112	398.00
IUUC-Cne-026907	Cryptococcus neoformans	31.24	4.00e-112	399.00
IUUC-Dre-027747	Danio rerio	65.71	0.00e+00	1345.00
IUUC-Dno-029668	Dasypus novemcinctus	96.51	0.00e+00	1866.00
IUUC-Dor-030404	Dipodomys ordii	90.44	0.00e+00	1760.00
IUUC-Dse-031345	Dothistroma septosporum	33.37	7.00e-121	428.00
IUUC-Dme-031711	Drosophila melanogaster	34.18	7.00e-146	511.00
IUUC-Ete-032308	Echinops telfairi	90.15	0.00e+00	914.00
IUUC-Eca-033637	Equus caballus	97.64	0.00e+00	1904.00
IUUC-Eeu-035151	Erinaceus europaeus	96.36	0.00e+00	1399.00
IUUC-Fca-035585	Felis catus	97.33	0.00e+00	1878.00
IUUC-Fal-037122	Ficedula albicollis	72.30	0.00e+00	1483.00
IUUC-Fox-038030	Fusarium oxysporum	33.74	2.00e-121	429.00
IUUC-Fso-038426	Fusarium solani	33.94	3.00e-127	449.00
IUUC-Gmo-038784	Gadus morhua	66.33	0.00e+00	1310.00
IUUC-Ggr-039973	Gaeumannomyces graminis	34.09	9.00e-122	431.00
IUUC-Gga-040692	Gallus gallus	74.13	0.00e+00	1511.00
IUUC-Gac-041868	Gasterosteus aculeatus	65.62	0.00e+00	1300.00
IUUC-Gma-044274	Glycine max	34.39	2.00e-136	479.00
IUUC-Ggo-045053	Gorilla gorilla	96.20	0.00e+00	1865.00
IUUC-Hsa-046635	Homo sapiens	96.40	0.00e+00	1867.00
IUUC-Hvu-047361	Hordeum vulgare	34.23	2.00e-126	446.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	96.81	0.00e+00	1867.00
IUUC-Kpa-049270	Komagataella pastoris	24.21	6.00e-76	278.00
IUUC-Lch-050188	Latimeria chalumnae	68.31	0.00e+00	1219.00
IUUC-Lpe-051026	Leersia perrieri	34.77	2.00e-132	466.00
IUUC-Loc-051821	Lepisosteus oculatus	67.11	0.00e+00	1338.00
IUUC-Lma-053178	Leptosphaeria maculans	34.61	1.00e-99	357.00
IUUC-Laf-053552	Loxodonta africana	96.20	0.00e+00	1866.00
IUUC-Mcc-054667	Macaca mulatta	96.30	0.00e+00	1861.00
IUUC-Meu-056422	Macropus eugenii	93.03	0.00e+00	870.00
IUUC-Mor-056981	Magnaporthe oryzae	33.61	4.00e-119	422.00
IUUC-Mtr-058703	Medicago truncatula	34.44	1.00e-133	470.00
IUUC-Mla-059088	Melampsora laricipopulina	34.77	5.00e-94	338.00
IUUC-Mga-059798	Meleagris gallopavo	73.92	0.00e+00	1505.00
IUUC-Mvi-060404	Microbotryum violaceum	33.77	2.00e-121	430.00
IUUC-Mmr-061630	Microcebus murinus	97.23	0.00e+00	1881.00
IUUC-Mdo-062354	Monodelphis domestica	93.22	0.00e+00	1840.00
IUUC-Mmu-063199	Mus musculus	95.38	0.00e+00	1860.00
IUUC-Mac-065595	Musa acuminata	35.57	2.00e-113	403.00
IUUC-Mpu-066596	Mustela putorius furo	97.02	0.00e+00	1897.00
IUUC-Mlu-067455	Myotis lucifugus	96.81	0.00e+00	1871.00
IUUC-Nfi-068565	Neosartorya fischeri	33.09	8.00e-116	411.00
IUUC-Ncr-068748	Neurospora crassa	33.07	5.00e-124	438.00
IUUC-Nle-068979	Nomascus leucogenys	96.51	0.00e+00	1675.00
IUUC-Opr-070711	Ochotona princeps	95.07	0.00e+00	1851.00
IUUC-Ont-072603	Oreochromis niloticus	65.51	0.00e+00	1327.00
IUUC-Oan-073136	Ornithorhynchus anatinus	85.34	0.00e+00	821.00
IUUC-Ocu-074496	Oryctolagus cuniculus	96.51	0.00e+00	1870.00
IUUC-Oba-075933	Oryza barthii	33.88	4.00e-113	402.00
IUUC-Obr-076290	Oryza brachyantha	34.29	7.00e-134	471.00
IUUC-Ogu-078728	Oryza glumaepatula	33.88	3.00e-113	402.00
IUUC-Oin-079954	Oryza indica	34.00	4.00e-125	442.00
IUUC-Olo-081033	Oryza longistaminata	32.57	1.00e-107	384.00
IUUC-Ome-081797	Oryza meridionalis	33.84	5.00e-120	425.00
IUUC-Oni-082802	Oryza nivara	33.88	3.00e-113	402.00
IUUC-Opu-083595	Oryza punctata	35.78	2.00e-133	469.00
IUUC-Oru-084199	Oryza rufipogon	33.88	3.00e-113	402.00
IUUC-Osa-085349	Oryza sativa	34.36	5.00e-133	468.00
IUUC-Ola-087482	Oryzias latipes	65.41	0.00e+00	1309.00
IUUC-Olu-087797	Ostreococcus lucimarinus	25.66	6.00e-66	245.00
IUUC-Oga-088817	Otolemur garnettii	96.20	0.00e+00	1898.00
IUUC-Oar-090350	Ovis aries	96.07	0.00e+00	1471.00
IUUC-Ptr-090999	Pan troglodytes	96.09	0.00e+00	1863.00
IUUC-Pan-092704	Papio anubis	96.30	0.00e+00	1861.00
IUUC-Psi-093529	Pelodiscus sinensis	73.61	0.00e+00	1476.00
IUUC-Pma-094400	Petromyzon marinus	56.53	0.00e+00	1094.00
IUUC-Pno-094875	Phaeosphaeria nodorum	32.13	1.00e-118	420.00
IUUC-Ppa-095231	Physcomitrella patens	33.81	2.00e-131	463.00
IUUC-Pfo-096967	Poecilia formosa	65.21	0.00e+00	1318.00
IUUC-Pab-098300	Pongo abelii	96.30	0.00e+00	1863.00
IUUC-Pop-098966	Populus trichocarpa	34.17	1.00e-140	494.00
IUUC-Pca-100643	Procavia capensis	94.90	0.00e+00	1771.00
IUUC-Ppe-101589	Prunus persica	33.64	7.00e-136	478.00
IUUC-Pva-102766	Pteropus vampyrus	96.40	0.00e+00	1828.00
IUUC-Pgr-103330	Puccinia graminis	30.79	4.00e-108	386.00
IUUC-Ptt-103809	Puccinia triticina	32.13	3.00e-91	329.00
IUUC-Pte-104319	Pyrenophora teres	32.24	2.00e-117	416.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	31.20	2.00e-105	377.00
IUUC-Rno-105817	Rattus norvegicus	95.07	0.00e+00	1857.00
IUUC-Sce-106255	Saccharomyces cerevisiae	23.25	3.00e-42	167.00
IUUC-Sha-107479	Sarcophilus harrisii	93.48	0.00e+00	1832.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	24.74	4.00e-68	253.00
IUUC-Spo-108146	Schizosaccharomyces pombe	26.81	2.00e-72	267.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	33.18	1.00e-110	394.00
IUUC-Smo-109585	Selaginella moellendorffii	34.86	1.00e-126	447.00
IUUC-Sit-110275	Setaria italica	34.80	4.00e-132	465.00
IUUC-Sly-111073	Solanum lycopersicum	34.01	4.00e-137	482.00
IUUC-Stu-112392	Solanum tuberosum	29.38	5.00e-15	73.90
IUUC-Sar-113718	Sorex araneus	93.33	0.00e+00	1796.00
IUUC-Sbi-114080	Sorghum bicolor	34.91	7.00e-137	481.00
IUUC-Sre-115160	Sporisorium reilianum	31.51	4.00e-123	436.00
IUUC-Tgu-116904	Taeniopygia guttata	73.33	0.00e+00	1337.00
IUUC-Tru-117946	Takifugu rubripes	64.60	0.00e+00	1312.00
IUUC-Tni-119692	Tetraodon nigroviridis	65.01	0.00e+00	1308.00
IUUC-Tca-121455	Theobroma cacao	33.82	5.00e-138	484.00
IUUC-Tre-122128	Trichoderma reesei	32.38	3.00e-122	432.00
IUUC-Tvi-122657	Trichoderma virens	33.10	4.00e-123	435.00
IUUC-Tae-125953	Triticum aestivum	34.23	1.00e-127	450.00
IUUC-Tur-126110	Triticum urartu	31.03	3.00e-96	346.00
IUUC-Tme-127173	Tuber melanosporum	30.65	2.00e-101	363.00
IUUC-Ttr-128420	Tursiops truncatus	97.43	0.00e+00	1888.00
IUUC-Uma-129580	Ustilago maydis	31.41	4.00e-122	432.00
IUUC-Vda-129790	Verticillium dahliae	31.65	6.00e-112	398.00
IUUC-Vvi-131095	Vitis vinifera	33.40	1.00e-132	467.00
IUUC-Xtr-131906	Xenopus tropicalis	68.75	0.00e+00	1367.00
IUUC-Xma-134197	Xiphophorus maculatus	65.62	0.00e+00	1319.00
IUUC-Yli-134617	Yarrowia lipolytica	28.93	2.00e-97	350.00
IUUC-Zma-134979	Zea mays	32.47	3.00e-104	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence