iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050603

Ensembl Protein ID

ENSLACP00000016514.1

UniProt Accession

H3B3P3; H3B3P3_LATCH

Genbank Protein ID

ENSLACP00000016514

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01037965

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014551.1	ENSLACT00000016628.1	ENSLACP00000016514.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-24	84.2	445	478

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           +++v+cl+f  +  +ll++G+ Dgt+k+W l t 
   Q: 445  QSPVYCLEFnqQQaHLLAAGNADGTVKIWQLNTE 478
           689******9855799*************99776 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MFTDEVLEAV GMASLWRKSR ETHCKSKSSQ TEDLVSTEAA VQALYTTETG TQTRPSKLLT 60
QDLDQVPHAD YPGLVKFLQT VEDNVIRELK KNVRSHAFDG FEVNWVDQNQ TVSCLHTLQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACGTTACT TTCACAGTTC CGGTGGATTT TATTTTTGTC GTACATATCT ACAATTCTCC 60
ACTCGTCGCC TTGGAAACAA AATCCCTGAG CCAGAAGTCG GTTCTGTGAG TGCATAGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005929--C:cilium
GO:0042073--P:intraciliary transport

KEGG

lcm:102345827

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	58.48	9.00e-160	556.00
IUUC-Apl-004015	Anas platyrhynchos	58.50	8.00e-163	566.00
IUUC-Ame-010762	Astyanax mexicanus	54.96	6.00e-155	540.00
IUUC-Bta-013392	Bos taurus	58.43	9.00e-172	596.00
IUUC-Cja-019374	Callithrix jacchus	58.23	5.00e-164	570.00
IUUC-Cfa-020365	Canis familiaris	59.08	1.00e-157	550.00
IUUC-Csa-023810	Chlorocebus sabaeus	58.32	1.00e-168	585.00
IUUC-Cho-024515	Choloepus hoffmanni	58.18	5.00e-119	421.00
IUUC-Cin-025690	Ciona intestinalis	29.25	2.00e-52	200.00
IUUC-Csv-026220	Ciona savignyi	30.25	9.00e-57	214.00
IUUC-Dre-028439	Danio rerio	53.78	3.00e-158	551.00
IUUC-Dno-029916	Dasypus novemcinctus	59.48	2.00e-169	588.00
IUUC-Dor-030853	Dipodomys ordii	57.83	8.00e-167	580.00
IUUC-Eca-033204	Equus caballus	62.76	3.00e-163	567.00
IUUC-Fca-036470	Felis catus	59.12	3.00e-162	564.00
IUUC-Fal-037484	Ficedula albicollis	57.85	6.00e-178	616.00
IUUC-Gmo-039252	Gadus morhua	51.39	2.00e-145	508.00
IUUC-Gga-040701	Gallus gallus	60.05	8.00e-155	540.00
IUUC-Gac-041440	Gasterosteus aculeatus	55.16	8.00e-156	543.00
IUUC-Ggo-044509	Gorilla gorilla	62.96	9.00e-162	563.00
IUUC-Hsa-046030	Homo sapiens	63.19	3.00e-162	564.00
IUUC-Itr-048001	Ictidomys tridecemlineatus	58.52	1.00e-166	579.00
IUUC-Loc-052914	Lepisosteus oculatus	55.67	2.00e-151	528.00
IUUC-Laf-053957	Loxodonta africana	59.58	5.00e-146	510.00
IUUC-Mcc-054805	Macaca mulatta	58.52	7.00e-170	590.00
IUUC-Meu-056115	Macropus eugenii	60.64	1.00e-178	619.00
IUUC-Mga-059377	Meleagris gallopavo	58.28	2.00e-166	578.00
IUUC-Mmr-061203	Microcebus murinus	59.08	3.00e-169	588.00
IUUC-Mdo-062646	Monodelphis domestica	60.08	3.00e-171	594.00
IUUC-Mmu-063156	Mus musculus	57.72	9.00e-162	563.00
IUUC-Mpu-065923	Mustela putorius furo	58.66	5.00e-165	573.00
IUUC-Mlu-067705	Myotis lucifugus	59.64	4.00e-173	600.00
IUUC-Nle-069635	Nomascus leucogenys	62.96	7.00e-162	563.00
IUUC-Opr-070939	Ochotona princeps	51.28	3.00e-108	385.00
IUUC-Ont-072205	Oreochromis niloticus	52.18	2.00e-146	512.00
IUUC-Oan-073427	Ornithorhynchus anatinus	58.42	9.00e-157	546.00
IUUC-Ocu-074234	Oryctolagus cuniculus	59.48	4.00e-162	564.00
IUUC-Ola-086461	Oryzias latipes	53.29	2.00e-152	531.00
IUUC-Oga-088616	Otolemur garnettii	63.59	9.00e-150	522.00
IUUC-Ptr-090563	Pan troglodytes	62.96	5.00e-162	564.00
IUUC-Pan-092105	Papio anubis	58.72	1.00e-165	575.00
IUUC-Psi-093169	Pelodiscus sinensis	60.99	0.00e+00	654.00
IUUC-Pma-094688	Petromyzon marinus	38.30	2.00e-95	342.00
IUUC-Pfo-096136	Poecilia formosa	51.29	7.00e-136	477.00
IUUC-Pab-098286	Pongo abelii	57.52	7.00e-160	556.00
IUUC-Pca-100577	Procavia capensis	55.15	1.00e-147	516.00
IUUC-Pva-103194	Pteropus vampyrus	59.32	3.00e-172	597.00
IUUC-Rno-105958	Rattus norvegicus	57.29	4.00e-164	570.00
IUUC-Sha-107438	Sarcophilus harrisii	61.68	2.00e-173	602.00
IUUC-Ssc-116210	Sus scrofa	58.23	9.00e-170	589.00
IUUC-Tgu-116704	Taeniopygia guttata	58.01	6.00e-174	603.00
IUUC-Tru-117530	Takifugu rubripes	49.29	1.00e-135	476.00
IUUC-Tni-120848	Tetraodon nigroviridis	46.05	8.00e-111	394.00
IUUC-Ttr-128697	Tursiops truncatus	63.85	9.00e-149	520.00
IUUC-Xtr-132843	Xenopus tropicalis	59.68	7.00e-174	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence