iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108836

Ensembl Protein ID

EFJ27722

UniProt Accession

D8RJH8; D8RJH8_SELML

Genbank Protein ID

EFJ27722.1

Protein Name

Putative uncharacterized protein ARPC1-2

Genbank Nucleotide ID

GL377581

Gene Name

ARPC1-2; SELMODRAFT_171977

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_171977	EFJ27722	EFJ27722

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-16	58.6	145	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H + vt++a+ ++  ll++ s D+++++++
   Q: 145  HGSTVTGVAWhPNnVLLATTSTDCKCRIFS 174
           99*********66699***********986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVAVASHQLA QCISGHAWNV DLTMIAVCTN NEVHIYNASP APSAVWDRLH VLQKHDQLVS 60
GVDWAPVSNY IVTVSHDRNS YVWKLEENVW QPTLVILRIN RAAISVKWSP RENKFAVASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTAGAGA GGGCTGGGAC AGCGCAAGGC GACAGCGCGC ACGCACGGAT TTTGTCTCGA 60
TCTGGAAGAT TGCTGATCGC TGTCAGGTAT GATCGCTAGC TAGCTACAGC GCATTTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

smo:SELMODRAFT_171977

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	51.94	2.00e-108	385.00
IUUC-Aml-002044	Ailuropoda melanoleuca	46.28	5.00e-81	293.00
IUUC-Atr-002844	Amborella trichopoda	65.18	3.00e-90	323.00
IUUC-Apl-003325	Anas platyrhynchos	45.21	8.00e-83	299.00
IUUC-Aca-004736	Anolis carolinensis	45.48	6.00e-83	300.00
IUUC-Aly-006568	Arabidopsis lyrata	59.42	3.00e-138	483.00
IUUC-Ath-006683	Arabidopsis thaliana	60.48	6.00e-139	486.00
IUUC-Ago-007966	Ashbya gossypii	35.19	4.00e-57	214.00
IUUC-Acl-008334	Aspergillus clavatus	39.35	5.00e-66	243.00
IUUC-Afl-008485	Aspergillus flavus	42.29	3.00e-60	226.00
IUUC-Afu-008780	Aspergillus fumigatus	37.98	5.00e-65	240.00
IUUC-Ani-009417	Aspergillus nidulans	38.34	2.00e-64	238.00
IUUC-Ang-009543	Aspergillus niger	39.13	2.00e-68	251.00
IUUC-Aor-010234	Aspergillus oryzae	37.70	2.00e-62	232.00
IUUC-Ate-010386	Aspergillus terreus	39.52	5.00e-69	253.00
IUUC-Ame-011852	Astyanax mexicanus	45.65	8.00e-83	299.00
IUUC-Bgr-012192	Blumeria graminis	37.70	7.00e-62	229.00
IUUC-Bta-012530	Bos taurus	46.28	7.00e-81	293.00
IUUC-Bci-013616	Botrytis cinerea	37.81	8.00e-65	239.00
IUUC-Bdi-014632	Brachypodium distachyon	61.99	4.00e-138	483.00
IUUC-Bol-016274	Brassica oleracea	59.74	7.00e-142	495.00
IUUC-Bra-016790	Brassica rapa	59.74	3.00e-137	480.00
IUUC-Cja-019362	Callithrix jacchus	46.01	8.00e-81	293.00
IUUC-Cfa-020167	Canis familiaris	46.03	5.00e-81	293.00
IUUC-Cpo-021933	Cavia porcellus	46.28	4.00e-81	294.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	38.22	3.00e-36	144.00
IUUC-Csa-023277	Chlorocebus sabaeus	44.03	4.00e-78	283.00
IUUC-Cho-024449	Choloepus hoffmanni	32.26	3.00e-24	105.00
IUUC-Cin-025186	Ciona intestinalis	39.57	1.00e-66	245.00
IUUC-Csv-026275	Ciona savignyi	40.00	1.00e-65	243.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	34.89	4.00e-60	224.00
IUUC-Cne-026926	Cryptococcus neoformans	41.46	4.00e-75	274.00
IUUC-Dre-028141	Danio rerio	44.50	3.00e-84	304.00
IUUC-Dno-029092	Dasypus novemcinctus	46.72	7.00e-79	287.00
IUUC-Dor-030391	Dipodomys ordii	46.72	8.00e-79	286.00
IUUC-Dse-031574	Dothistroma septosporum	37.97	3.00e-65	241.00
IUUC-Dme-031907	Drosophila melanogaster	38.12	2.00e-62	231.00
IUUC-Ete-032299	Echinops telfairi	44.95	3.00e-82	297.00
IUUC-Eca-034074	Equus caballus	46.28	5.00e-81	293.00
IUUC-Eeu-035041	Erinaceus europaeus	35.89	2.00e-23	102.00
IUUC-Fca-036154	Felis catus	46.28	5.00e-81	293.00
IUUC-Fal-037279	Ficedula albicollis	45.48	9.00e-83	299.00
IUUC-Fox-037842	Fusarium oxysporum	38.19	8.00e-67	246.00
IUUC-Fso-038276	Fusarium solani	38.19	4.00e-66	244.00
IUUC-Gmo-039673	Gadus morhua	44.15	4.00e-74	271.00
IUUC-Ggr-039762	Gaeumannomyces graminis	36.81	1.00e-62	232.00
IUUC-Gga-040898	Gallus gallus	44.89	2.00e-83	301.00
IUUC-Gac-042531	Gasterosteus aculeatus	44.74	2.00e-75	275.00
IUUC-Gma-043868	Glycine max	60.32	2.00e-141	494.00
IUUC-Ggo-045355	Gorilla gorilla	34.48	3.00e-49	188.00
IUUC-Hsa-046309	Homo sapiens	46.28	5.00e-81	293.00
IUUC-Hvu-047456	Hordeum vulgare	58.19	1.00e-59	221.00
IUUC-Itr-047864	Ictidomys tridecemlineatus	46.28	5.00e-81	293.00
IUUC-Kpa-049288	Komagataella pastoris	34.42	4.00e-52	197.00
IUUC-Lch-049679	Latimeria chalumnae	42.90	2.00e-80	291.00
IUUC-Lpe-050869	Leersia perrieri	61.71	2.00e-136	478.00
IUUC-Loc-052532	Lepisosteus oculatus	43.92	5.00e-79	287.00
IUUC-Lma-053109	Leptosphaeria maculans	36.34	9.00e-63	233.00
IUUC-Laf-054271	Loxodonta africana	46.28	7.00e-81	293.00
IUUC-Mcc-054857	Macaca mulatta	46.76	2.00e-79	288.00
IUUC-Meu-056302	Macropus eugenii	44.92	4.00e-83	300.00
IUUC-Mor-057167	Magnaporthe oryzae	36.34	1.00e-62	232.00
IUUC-Mtr-057659	Medicago truncatula	58.99	4.00e-138	483.00
IUUC-Mla-058886	Melampsora laricipopulina	40.29	3.00e-73	268.00
IUUC-Mga-059279	Meleagris gallopavo	45.16	6.00e-84	303.00
IUUC-Mvi-060302	Microbotryum violaceum	38.52	3.00e-69	254.00
IUUC-Mmr-060765	Microcebus murinus	46.99	8.00e-80	289.00
IUUC-Mdo-062326	Monodelphis domestica	45.48	4.00e-80	290.00
IUUC-Mmu-063819	Mus musculus	46.01	4.00e-81	293.00
IUUC-Mac-064632	Musa acuminata	63.07	1.00e-143	501.00
IUUC-Mpu-066247	Mustela putorius furo	44.65	5.00e-81	293.00
IUUC-Mlu-067184	Myotis lucifugus	46.28	3.00e-81	294.00
IUUC-Nfi-068383	Neosartorya fischeri	38.25	1.00e-65	242.00
IUUC-Ncr-068777	Neurospora crassa	36.26	3.00e-63	234.00
IUUC-Nle-069900	Nomascus leucogenys	46.03	5.00e-81	293.00
IUUC-Opr-070386	Ochotona princeps	47.02	4.00e-70	257.00
IUUC-Ont-071283	Oreochromis niloticus	44.95	5.00e-75	273.00
IUUC-Oan-072692	Ornithorhynchus anatinus	45.70	3.00e-84	304.00
IUUC-Ocu-074340	Oryctolagus cuniculus	46.28	5.00e-81	293.00
IUUC-Oba-075379	Oryza barthii	61.81	2.00e-137	481.00
IUUC-Obr-076404	Oryza brachyantha	62.16	9.00e-140	488.00
IUUC-Ogl-077409	Oryza glaberrima	58.65	8.00e-132	462.00
IUUC-Ogu-078759	Oryza glumaepatula	61.81	3.00e-137	480.00
IUUC-Oin-079118	Oryza indica	61.62	3.00e-139	487.00
IUUC-Olo-081055	Oryza longistaminata	61.31	1.00e-122	431.00
IUUC-Ome-081281	Oryza meridionalis	61.81	3.00e-137	481.00
IUUC-Oni-083043	Oryza nivara	61.81	2.00e-137	481.00
IUUC-Opu-083392	Oryza punctata	52.75	5.00e-111	393.00
IUUC-Oru-084839	Oryza rufipogon	61.81	2.00e-137	481.00
IUUC-Osa-085377	Oryza sativa	61.62	3.00e-139	486.00
IUUC-Ola-087274	Oryzias latipes	45.90	6.00e-76	276.00
IUUC-Oga-088016	Otolemur garnettii	46.01	2.00e-80	291.00
IUUC-Oar-089613	Ovis aries	46.28	8.00e-81	293.00
IUUC-Ptr-091548	Pan troglodytes	46.28	5.00e-81	293.00
IUUC-Pan-091727	Papio anubis	43.85	4.00e-80	290.00
IUUC-Psi-093767	Pelodiscus sinensis	44.95	3.00e-82	297.00
IUUC-Pma-094124	Petromyzon marinus	43.94	4.00e-81	293.00
IUUC-Pno-095031	Phaeosphaeria nodorum	37.43	1.00e-63	235.00
IUUC-Ppa-095858	Physcomitrella patens	67.20	2.00e-153	534.00
IUUC-Pfo-097107	Poecilia formosa	44.56	7.00e-74	270.00
IUUC-Pab-098238	Pongo abelii	43.60	3.00e-80	291.00
IUUC-Pop-098954	Populus trichocarpa	61.57	9.00e-103	365.00
IUUC-Pca-100580	Procavia capensis	44.92	4.00e-81	293.00
IUUC-Ppe-101681	Prunus persica	61.44	5.00e-143	499.00
IUUC-Pva-102928	Pteropus vampyrus	43.09	1.00e-75	275.00
IUUC-Pgr-103309	Puccinia graminis	42.29	9.00e-77	279.00
IUUC-Ptt-103959	Puccinia triticina	42.89	4.00e-76	277.00
IUUC-Pte-104384	Pyrenophora teres	37.50	1.00e-60	226.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	37.50	8.00e-61	226.00
IUUC-Rno-104846	Rattus norvegicus	43.85	3.00e-82	297.00
IUUC-Sce-106411	Saccharomyces cerevisiae	36.36	1.00e-56	213.00
IUUC-Sha-106691	Sarcophilus harrisii	45.48	2.00e-80	291.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	39.89	1.00e-68	252.00
IUUC-Spo-108053	Schizosaccharomyces pombe	37.73	8.00e-64	236.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	37.53	1.00e-64	239.00
IUUC-Sit-110150	Setaria italica	60.70	2.00e-138	484.00
IUUC-Sly-111048	Solanum lycopersicum	60.53	5.00e-139	486.00
IUUC-Sar-113404	Sorex araneus	52.26	3.00e-66	244.00
IUUC-Sbi-114685	Sorghum bicolor	60.11	5.00e-127	446.00
IUUC-Ssc-115851	Sus scrofa	46.28	7.00e-81	293.00
IUUC-Tgu-116701	Taeniopygia guttata	45.48	9.00e-83	299.00
IUUC-Tru-117603	Takifugu rubripes	44.85	8.00e-78	283.00
IUUC-Tsy-119515	Tarsius syrichta	54.61	6.00e-39	154.00
IUUC-Tni-119844	Tetraodon nigroviridis	44.15	4.00e-74	270.00
IUUC-Tca-121645	Theobroma cacao	62.99	3.00e-140	490.00
IUUC-Tre-122045	Trichoderma reesei	37.09	1.00e-62	233.00
IUUC-Tvi-122523	Trichoderma virens	37.26	1.00e-62	232.00
IUUC-Tae-125810	Triticum aestivum	54.59	1.00e-127	448.00
IUUC-Tur-126640	Triticum urartu	58.36	2.00e-123	434.00
IUUC-Tme-127018	Tuber melanosporum	37.46	5.00e-57	213.00
IUUC-Tbe-127321	Tupaia belangeri	47.46	4.00e-73	267.00
IUUC-Ttr-128698	Tursiops truncatus	44.15	3.00e-80	291.00
IUUC-Uma-129423	Ustilago maydis	46.84	6.00e-71	260.00
IUUC-Vda-129706	Verticillium dahliae	35.79	4.00e-61	227.00
IUUC-Vvi-131647	Vitis vinifera	62.23	2.00e-144	504.00
IUUC-Xtr-131770	Xenopus tropicalis	43.21	9.00e-81	292.00
IUUC-Xma-133435	Xiphophorus maculatus	44.56	7.00e-74	270.00
IUUC-Yli-134471	Yarrowia lipolytica	38.32	3.00e-64	238.00
IUUC-Zma-135615	Zea mays	59.59	2.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence