iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115851

Ensembl Protein ID

ENSSSCP00000008130.2

UniProt Accession

F1REX9; F1REX9_PIG

Genbank Protein ID

ENSSSCP00000008130

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP103031

Gene Name

ARPC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000007609.2	ENSSSCT00000008349.2	ENSSSCP00000008130.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-14	53.2	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++ +t++++ +  +++v+++ D + +vW+ ++gv
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKDGV 85
           9999*******6669**************988776 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIALSPNNH EVHIYKKNGS QWVKAHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGGTGAGA ATTTCCGGGT TCAGGGCGGG AAGAGGGGTT CAGAGCCTTA TCCTCCCGTG 60
TTGGAGGGGC AGTTGCTGAA CTTCCCCAAC GCCTCTGGCC TGTGGCGCCA GCCTGGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0036195--C:muscle cell projection membrane
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.04	2.00e-62	232.00
IUUC-Aml-002044	Ailuropoda melanoleuca	99.46	0.00e+00	738.00
IUUC-Atr-002844	Amborella trichopoda	51.15	2.00e-55	208.00
IUUC-Apl-003325	Anas platyrhynchos	94.86	0.00e+00	742.00
IUUC-Aca-004736	Anolis carolinensis	94.86	0.00e+00	739.00
IUUC-Aly-006568	Arabidopsis lyrata	41.98	3.00e-79	288.00
IUUC-Ath-006683	Arabidopsis thaliana	42.25	6.00e-79	287.00
IUUC-Ago-007966	Ashbya gossypii	38.73	3.00e-65	241.00
IUUC-Acl-008334	Aspergillus clavatus	46.67	4.00e-92	330.00
IUUC-Afl-008485	Aspergillus flavus	46.52	7.00e-89	321.00
IUUC-Afu-008780	Aspergillus fumigatus	46.39	6.00e-93	333.00
IUUC-Ani-009417	Aspergillus nidulans	47.63	3.00e-93	334.00
IUUC-Ang-009543	Aspergillus niger	48.75	4.00e-95	340.00
IUUC-Aor-010234	Aspergillus oryzae	46.80	8.00e-91	326.00
IUUC-Ate-010386	Aspergillus terreus	47.63	1.00e-95	342.00
IUUC-Ame-011852	Astyanax mexicanus	90.81	0.00e+00	714.00
IUUC-Bgr-012192	Blumeria graminis	43.33	8.00e-84	303.00
IUUC-Bta-012530	Bos taurus	99.19	0.00e+00	736.00
IUUC-Bci-013616	Botrytis cinerea	44.44	1.00e-87	316.00
IUUC-Bdi-014632	Brachypodium distachyon	43.36	3.00e-78	285.00
IUUC-Bol-016274	Brassica oleracea	42.67	4.00e-81	294.00
IUUC-Bra-016790	Brassica rapa	41.33	5.00e-80	290.00
IUUC-Cel-018122	Caenorhabditis elegans	56.63	6.00e-113	400.00
IUUC-Cja-019362	Callithrix jacchus	99.19	0.00e+00	739.00
IUUC-Cfa-020167	Canis familiaris	99.46	0.00e+00	739.00
IUUC-Cpo-021933	Cavia porcellus	99.46	0.00e+00	740.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	36.22	8.00e-34	136.00
IUUC-Csa-023277	Chlorocebus sabaeus	77.21	3.00e-176	610.00
IUUC-Cho-024449	Choloepus hoffmanni	75.83	1.00e-98	352.00
IUUC-Cin-025186	Ciona intestinalis	56.49	4.00e-118	417.00
IUUC-Csv-026275	Ciona savignyi	56.32	7.00e-114	403.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	44.57	2.00e-88	318.00
IUUC-Cne-026926	Cryptococcus neoformans	45.91	5.00e-98	350.00
IUUC-Dre-028057	Danio rerio	90.27	0.00e+00	709.00
IUUC-Dno-029092	Dasypus novemcinctus	98.88	0.00e+00	709.00
IUUC-Dor-030391	Dipodomys ordii	98.32	0.00e+00	707.00
IUUC-Dse-031574	Dothistroma septosporum	44.66	3.00e-83	301.00
IUUC-Dme-031907	Drosophila melanogaster	58.47	1.00e-124	439.00
IUUC-Ete-032299	Echinops telfairi	68.10	1.00e-159	555.00
IUUC-Eca-034074	Equus caballus	99.46	0.00e+00	738.00
IUUC-Eeu-035041	Erinaceus europaeus	83.68	4.00e-94	337.00
IUUC-Fca-036154	Felis catus	99.46	0.00e+00	738.00
IUUC-Fal-037279	Ficedula albicollis	94.86	0.00e+00	741.00
IUUC-Fox-037842	Fusarium oxysporum	45.96	1.00e-88	319.00
IUUC-Fso-038276	Fusarium solani	45.68	2.00e-88	318.00
IUUC-Gmo-039673	Gadus morhua	87.84	0.00e+00	645.00
IUUC-Ggr-039762	Gaeumannomyces graminis	44.44	3.00e-87	315.00
IUUC-Gga-040189	Gallus gallus	95.68	0.00e+00	746.00
IUUC-Gac-042531	Gasterosteus aculeatus	88.65	0.00e+00	652.00
IUUC-Gma-042803	Glycine max	42.82	6.00e-79	287.00
IUUC-Ggo-045355	Gorilla gorilla	54.81	5.00e-119	420.00
IUUC-Hsa-046309	Homo sapiens	99.46	0.00e+00	738.00
IUUC-Hvu-047456	Hordeum vulgare	30.34	3.00e-16	77.80
IUUC-Itr-047864	Ictidomys tridecemlineatus	99.46	0.00e+00	738.00
IUUC-Kpa-049288	Komagataella pastoris	40.38	6.00e-75	273.00
IUUC-Lch-050427	Latimeria chalumnae	89.22	0.00e+00	702.00
IUUC-Lpe-050869	Leersia perrieri	41.21	1.00e-76	280.00
IUUC-Loc-052532	Lepisosteus oculatus	91.40	0.00e+00	688.00
IUUC-Lma-053109	Leptosphaeria maculans	44.88	7.00e-88	317.00
IUUC-Laf-054271	Loxodonta africana	99.19	0.00e+00	737.00
IUUC-Mcc-054857	Macaca mulatta	98.09	0.00e+00	714.00
IUUC-Meu-056540	Macropus eugenii	92.53	0.00e+00	625.00
IUUC-Mor-057167	Magnaporthe oryzae	42.78	2.00e-84	305.00
IUUC-Mtr-057659	Medicago truncatula	44.00	5.00e-81	294.00
IUUC-Mla-058886	Melampsora laricipopulina	44.16	2.00e-90	325.00
IUUC-Mga-059327	Meleagris gallopavo	95.68	0.00e+00	746.00
IUUC-Mvi-060302	Microbotryum violaceum	46.92	2.00e-94	338.00
IUUC-Mmr-060765	Microcebus murinus	97.83	0.00e+00	717.00
IUUC-Mdo-062326	Monodelphis domestica	95.95	0.00e+00	721.00
IUUC-Mmu-063819	Mus musculus	98.38	0.00e+00	733.00
IUUC-Mac-064632	Musa acuminata	42.12	2.00e-80	292.00
IUUC-Mpu-066247	Mustela putorius furo	67.29	6.00e-154	536.00
IUUC-Mlu-067184	Myotis lucifugus	99.19	0.00e+00	735.00
IUUC-Nfi-068383	Neosartorya fischeri	46.67	5.00e-93	333.00
IUUC-Ncr-068777	Neurospora crassa	43.41	5.00e-87	314.00
IUUC-Nle-069900	Nomascus leucogenys	99.46	0.00e+00	738.00
IUUC-Opr-070386	Ochotona princeps	89.73	0.00e+00	648.00
IUUC-Ont-071283	Oreochromis niloticus	89.19	0.00e+00	656.00
IUUC-Oan-073139	Ornithorhynchus anatinus	95.68	0.00e+00	716.00
IUUC-Ocu-074340	Oryctolagus cuniculus	99.46	0.00e+00	738.00
IUUC-Oba-075379	Oryza barthii	41.48	9.00e-77	280.00
IUUC-Obr-076404	Oryza brachyantha	41.37	5.00e-78	284.00
IUUC-Ogl-077409	Oryza glaberrima	38.63	5.00e-70	257.00
IUUC-Ogu-078759	Oryza glumaepatula	41.48	1.00e-76	280.00
IUUC-Oin-079118	Oryza indica	41.37	4.00e-77	281.00
IUUC-Olo-081055	Oryza longistaminata	40.99	2.00e-66	245.00
IUUC-Ome-081281	Oryza meridionalis	41.48	1.00e-76	280.00
IUUC-Oni-083043	Oryza nivara	41.48	9.00e-77	280.00
IUUC-Opu-083392	Oryza punctata	33.52	5.00e-54	204.00
IUUC-Oru-084839	Oryza rufipogon	41.48	9.00e-77	280.00
IUUC-Osa-085377	Oryza sativa	41.37	4.00e-77	281.00
IUUC-Ola-087274	Oryzias latipes	87.60	0.00e+00	636.00
IUUC-Oga-088016	Otolemur garnettii	98.92	0.00e+00	736.00
IUUC-Oar-090122	Ovis aries	98.92	0.00e+00	736.00
IUUC-Ptr-091548	Pan troglodytes	99.46	0.00e+00	738.00
IUUC-Pan-091727	Papio anubis	67.83	3.00e-158	550.00
IUUC-Psi-093767	Pelodiscus sinensis	94.86	0.00e+00	741.00
IUUC-Pma-094124	Petromyzon marinus	78.59	2.00e-180	624.00
IUUC-Pno-095031	Phaeosphaeria nodorum	45.33	7.00e-88	317.00
IUUC-Ppa-095858	Physcomitrella patens	45.80	5.00e-86	311.00
IUUC-Pfo-097107	Poecilia formosa	88.38	0.00e+00	649.00
IUUC-Pab-098238	Pongo abelii	67.56	1.00e-157	548.00
IUUC-Pop-098954	Populus trichocarpa	37.50	7.00e-43	166.00
IUUC-Pca-100580	Procavia capensis	66.49	1.00e-153	535.00
IUUC-Ppe-101681	Prunus persica	42.09	4.00e-79	288.00
IUUC-Pva-102908	Pteropus vampyrus	97.41	0.00e+00	650.00
IUUC-Pgr-103309	Puccinia graminis	44.64	7.00e-92	330.00
IUUC-Ptt-103959	Puccinia triticina	44.84	6.00e-94	337.00
IUUC-Pte-104384	Pyrenophora teres	46.24	3.00e-87	315.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	46.09	6.00e-87	313.00
IUUC-Rno-105008	Rattus norvegicus	98.47	0.00e+00	645.00
IUUC-Sce-106411	Saccharomyces cerevisiae	37.20	2.00e-65	242.00
IUUC-Sha-106691	Sarcophilus harrisii	96.46	0.00e+00	719.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	45.68	1.00e-87	316.00
IUUC-Spo-108053	Schizosaccharomyces pombe	43.73	6.00e-89	320.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	44.72	5.00e-88	317.00
IUUC-Smo-108836	Selaginella moellendorffii	46.28	6.00e-84	303.00
IUUC-Sit-110150	Setaria italica	42.66	1.00e-79	289.00
IUUC-Sly-111048	Solanum lycopersicum	41.18	2.00e-76	279.00
IUUC-Sar-113599	Sorex araneus	85.47	5.00e-172	596.00
IUUC-Sbi-114685	Sorghum bicolor	43.32	2.00e-76	279.00
IUUC-Sre-115090	Sporisorium reilianum	46.08	7.00e-97	347.00
IUUC-Tgu-116701	Taeniopygia guttata	94.86	0.00e+00	741.00
IUUC-Tru-117603	Takifugu rubripes	87.50	0.00e+00	658.00
IUUC-Tsy-119515	Tarsius syrichta	89.58	1.00e-74	273.00
IUUC-Tni-119844	Tetraodon nigroviridis	89.73	0.00e+00	653.00
IUUC-Tca-121645	Theobroma cacao	42.86	9.00e-80	290.00
IUUC-Tre-122045	Trichoderma reesei	44.85	2.00e-86	311.00
IUUC-Tvi-122523	Trichoderma virens	45.00	4.00e-87	314.00
IUUC-Tae-125810	Triticum aestivum	37.32	3.00e-70	258.00
IUUC-Tur-126640	Triticum urartu	39.78	4.00e-67	248.00
IUUC-Tme-127018	Tuber melanosporum	44.93	8.00e-85	306.00
IUUC-Tbe-127321	Tupaia belangeri	99.08	0.00e+00	648.00
IUUC-Ttr-128178	Tursiops truncatus	98.56	0.00e+00	682.00
IUUC-Uma-129423	Ustilago maydis	45.81	2.00e-98	352.00
IUUC-Vda-129706	Verticillium dahliae	45.30	2.00e-88	318.00
IUUC-Vvi-131647	Vitis vinifera	43.01	1.00e-78	286.00
IUUC-Xtr-132735	Xenopus tropicalis	84.37	0.00e+00	630.00
IUUC-Xma-133435	Xiphophorus maculatus	88.38	0.00e+00	649.00
IUUC-Yli-134471	Yarrowia lipolytica	46.07	7.00e-82	296.00
IUUC-Zma-135615	Zea mays	42.30	2.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence