iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000006057.3	ENSXETT00000013333.3	ENSXETP00000013333.3
ENSXETG00000006057.3	ENSXETT00000053489.2	ENSXETP00000053489.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-11	43.1	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++ +t++++ +  +++v+++ D + +vW+ ++gv
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKDGV 85
           9999*******6669**************988776 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSLHQFLLEP ISCHAWNKDL TQIAISPNNH EVHIYKKSGN QWVKGHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGGGATTG TAAGGGAAAG AGCTTGCAGG CATTCTATCA ATAACCCTCC CTTCCAAAGT 60
CGGTAGGTTA CTGACAGCAG GGGACCAGAT AATCTAAACT AAGTAAGTGA AGCGTTGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002044	Ailuropoda melanoleuca	84.64	0.00e+00	632.00
IUUC-Apl-003325	Anas platyrhynchos	87.33	0.00e+00	672.00
IUUC-Aca-004736	Anolis carolinensis	86.52	0.00e+00	666.00
IUUC-Acl-008334	Aspergillus clavatus	46.96	9.00e-91	326.00
IUUC-Afl-008485	Aspergillus flavus	48.97	6.00e-88	318.00
IUUC-Afu-008780	Aspergillus fumigatus	47.11	6.00e-92	330.00
IUUC-Ang-009543	Aspergillus niger	47.79	7.00e-92	330.00
IUUC-Aor-010234	Aspergillus oryzae	46.96	1.00e-87	316.00
IUUC-Ate-010386	Aspergillus terreus	47.24	2.00e-91	329.00
IUUC-Ame-011852	Astyanax mexicanus	83.29	0.00e+00	647.00
IUUC-Bta-012530	Bos taurus	84.64	0.00e+00	631.00
IUUC-Cja-019362	Callithrix jacchus	84.37	0.00e+00	632.00
IUUC-Cfa-020167	Canis familiaris	84.64	0.00e+00	633.00
IUUC-Cpo-021933	Cavia porcellus	84.64	0.00e+00	634.00
IUUC-Cho-024449	Choloepus hoffmanni	58.75	8.00e-73	266.00
IUUC-Cin-025186	Ciona intestinalis	53.10	4.00e-109	387.00
IUUC-Csv-026275	Ciona savignyi	53.14	5.00e-106	377.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	45.00	1.00e-85	309.00
IUUC-Cne-026926	Cryptococcus neoformans	45.19	4.00e-93	334.00
IUUC-Dre-028057	Danio rerio	83.29	0.00e+00	646.00
IUUC-Dno-029092	Dasypus novemcinctus	84.83	2.00e-175	608.00
IUUC-Dor-030391	Dipodomys ordii	85.11	3.00e-176	610.00
IUUC-Dme-031907	Drosophila melanogaster	55.93	4.00e-118	417.00
IUUC-Eca-034074	Equus caballus	84.64	0.00e+00	632.00
IUUC-Eeu-035041	Erinaceus europaeus	65.83	2.00e-68	252.00
IUUC-Fca-036154	Felis catus	84.64	0.00e+00	632.00
IUUC-Fal-037279	Ficedula albicollis	87.06	0.00e+00	669.00
IUUC-Fox-037842	Fusarium oxysporum	45.83	2.00e-86	311.00
IUUC-Gmo-039673	Gadus morhua	80.32	5.00e-168	583.00
IUUC-Ggr-039762	Gaeumannomyces graminis	45.30	3.00e-86	311.00
IUUC-Gga-040189	Gallus gallus	86.79	0.00e+00	667.00
IUUC-Gac-042531	Gasterosteus aculeatus	81.67	7.00e-171	592.00
IUUC-Hsa-046309	Homo sapiens	84.64	0.00e+00	632.00
IUUC-Itr-047864	Ictidomys tridecemlineatus	84.64	0.00e+00	632.00
IUUC-Lch-050427	Latimeria chalumnae	83.83	0.00e+00	650.00
IUUC-Loc-052532	Lepisosteus oculatus	84.72	2.00e-180	624.00
IUUC-Laf-054271	Loxodonta africana	84.37	0.00e+00	631.00
IUUC-Mcc-054857	Macaca mulatta	85.67	7.00e-177	612.00
IUUC-Meu-056540	Macropus eugenii	82.23	2.00e-158	551.00
IUUC-Mga-059327	Meleagris gallopavo	86.79	0.00e+00	667.00
IUUC-Mvi-060302	Microbotryum violaceum	47.43	4.00e-89	321.00
IUUC-Mmr-060765	Microcebus murinus	85.67	1.00e-177	615.00
IUUC-Mdo-062326	Monodelphis domestica	85.44	0.00e+00	640.00
IUUC-Mmu-063819	Mus musculus	83.83	0.00e+00	630.00
IUUC-Mlu-067184	Myotis lucifugus	84.91	0.00e+00	634.00
IUUC-Nfi-068383	Neosartorya fischeri	46.83	1.00e-91	329.00
IUUC-Nle-069900	Nomascus leucogenys	84.64	0.00e+00	632.00
IUUC-Opr-070386	Ochotona princeps	76.01	2.00e-157	548.00
IUUC-Ont-071283	Oreochromis niloticus	81.94	2.00e-171	594.00
IUUC-Oan-073139	Ornithorhynchus anatinus	85.98	0.00e+00	637.00
IUUC-Ocu-074340	Oryctolagus cuniculus	84.64	0.00e+00	632.00
IUUC-Ola-087274	Oryzias latipes	80.65	2.00e-165	575.00
IUUC-Oga-088016	Otolemur garnettii	84.37	0.00e+00	631.00
IUUC-Oar-090122	Ovis aries	84.91	0.00e+00	634.00
IUUC-Ptr-091548	Pan troglodytes	84.64	0.00e+00	632.00
IUUC-Psi-093767	Pelodiscus sinensis	87.33	0.00e+00	671.00
IUUC-Pma-094124	Petromyzon marinus	74.59	1.00e-166	578.00
IUUC-Pfo-097107	Poecilia formosa	81.40	4.00e-170	590.00
IUUC-Pva-102908	Pteropus vampyrus	82.81	1.00e-158	552.00
IUUC-Pte-104384	Pyrenophora teres	45.05	2.00e-85	308.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	45.05	3.00e-85	308.00
IUUC-Rno-105008	Rattus norvegicus	89.63	2.00e-172	597.00
IUUC-Sha-106691	Sarcophilus harrisii	86.41	0.00e+00	640.00
IUUC-Sar-113599	Sorex araneus	74.44	1.00e-147	515.00
IUUC-Sre-115090	Sporisorium reilianum	55.74	1.00e-93	336.00
IUUC-Ssc-115851	Sus scrofa	84.37	0.00e+00	631.00
IUUC-Tgu-116701	Taeniopygia guttata	87.06	0.00e+00	669.00
IUUC-Tru-117603	Takifugu rubripes	79.84	2.00e-171	594.00
IUUC-Tsy-119515	Tarsius syrichta	87.41	4.00e-72	264.00
IUUC-Tni-119844	Tetraodon nigroviridis	81.94	7.00e-170	589.00
IUUC-Tre-122045	Trichoderma reesei	45.56	6.00e-86	310.00
IUUC-Tvi-122523	Trichoderma virens	45.56	3.00e-85	308.00
IUUC-Tbe-127321	Tupaia belangeri	90.55	3.00e-173	600.00
IUUC-Ttr-128178	Tursiops truncatus	84.24	8.00e-169	585.00
IUUC-Uma-129423	Ustilago maydis	44.99	2.00e-94	339.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence