iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000195

Ensembl Protein ID

EMT12234

UniProt Accession

M8BZI3; M8BZI3_AEGTA

Genbank Protein ID

EMT12234.1

Protein Name

Retinoblastoma-binding protein 6

Genbank Nucleotide ID

KD551174

Gene Name

F775_02782

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_02782	EMT12234	EMT12234

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.30e-07	29.7	292	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp..sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           +p+e++Cp+ +e+M+d v ++  +  ++  ++I+ ++ ++   c    +++  +dl Pn tlr++i++ +
   Q: 292  LPPELRCPLCKEVMKDAVLTSkcCFKSFCDKCIRDYIINKSM-CVCGATSILADDLLPNRTLRETISRIL 360
           79*****************99778899**********88887.888888999**************9865 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAVYYKFKSA RDYDSIPIEG QFISVLNLKE MIFESKHLGR GTDFDLMISN AQTDEEYADE 60
SIMIPKNTSV LIRRIPGRPR MPIVTEPQEA IAAENRVEEI VPSGSAFLGD SSMKYPEESE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCT ATTATAAGTT CAAGAGTGCC AGAGACTATG ACTCGATCCC TATCGAGGGG 60
CAGTTCATCT CGGTTCTCAA CCTCAAGGAG ATGATTTTTG AGTCCAAGCA CCTTGGCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR014891--DWNN_domain
IPR025829--Zn_knuckle_CX2CX3GHX4C
IPR001878--Znf_CCHC
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51282--DWNN

Pfam

PF08783--DWNN
PF13696--zf-CCHC_2

SMART

SM01180--DWNN

Gene Ontology

GO:0005634--C:nucleus
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

ats:F775_02782

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001655	Ailuropoda melanoleuca	33.73	4.00e-20	94.00
IUUC-Atr-002768	Amborella trichopoda	54.88	9.00e-138	483.00
IUUC-Apl-004100	Anas platyrhynchos	36.47	4.00e-21	97.40
IUUC-Aca-004345	Anolis carolinensis	33.73	3.00e-18	87.00
IUUC-Aly-006444	Arabidopsis lyrata	54.93	7.00e-139	487.00
IUUC-Ath-007648	Arabidopsis thaliana	52.01	9.00e-137	480.00
IUUC-Ago-007949	Ashbya gossypii	27.27	4.00e-19	88.20
IUUC-Acl-008118	Aspergillus clavatus	26.59	2.00e-13	70.50
IUUC-Afl-008408	Aspergillus flavus	28.21	7.00e-09	54.70
IUUC-Afu-008777	Aspergillus fumigatus	27.84	5.00e-15	75.50
IUUC-Ani-009426	Aspergillus nidulans	27.73	4.00e-30	125.00
IUUC-Ang-009735	Aspergillus niger	45.33	1.00e-14	73.90
IUUC-Aor-010213	Aspergillus oryzae	30.77	8.00e-16	78.20
IUUC-Ate-010474	Aspergillus terreus	30.18	2.00e-15	76.60
IUUC-Ame-010679	Astyanax mexicanus	35.33	4.00e-20	94.00
IUUC-Bgr-012229	Blumeria graminis	29.12	4.00e-15	75.50
IUUC-Bta-012672	Bos taurus	33.73	1.00e-20	95.50
IUUC-Bci-013880	Botrytis cinerea	29.95	8.00e-16	78.20
IUUC-Bdi-014276	Brachypodium distachyon	87.66	0.00e+00	940.00
IUUC-Bol-015602	Brassica oleracea	51.99	6.00e-132	464.00
IUUC-Bra-016670	Brassica rapa	48.93	9.00e-138	483.00
IUUC-Cel-018532	Caenorhabditis elegans	25.87	6.00e-24	105.00
IUUC-Cja-018843	Callithrix jacchus	34.13	1.00e-20	95.50
IUUC-Cfa-021107	Canis familiaris	33.73	3.00e-20	94.70
IUUC-Cre-022712	Chlamydomonas reinhardtii	47.69	2.00e-11	62.80
IUUC-Csa-023397	Chlorocebus sabaeus	33.73	1.00e-20	95.50
IUUC-Cho-024327	Choloepus hoffmanni	33.33	1.00e-19	92.80
IUUC-Cin-025439	Ciona intestinalis	43.59	1.00e-14	72.40
IUUC-Csv-026162	Ciona savignyi	29.01	7.00e-10	56.60
IUUC-Cgl-026629	Colletotrichum gloeosporioides	32.43	4.00e-17	82.40
IUUC-Cne-026921	Cryptococcus neoformans	28.57	5.00e-33	135.00
IUUC-Cme-027244	Cyanidioschyzon merolae	31.25	2.00e-23	104.00
IUUC-Dre-028023	Danio rerio	35.63	4.00e-20	94.00
IUUC-Dno-029430	Dasypus novemcinctus	48.65	2.00e-15	78.60
IUUC-Dor-030406	Dipodomys ordii	37.88	1.00e-17	85.50
IUUC-Dse-031312	Dothistroma septosporum	30.06	1.00e-11	63.90
IUUC-Dme-032133	Drosophila melanogaster	52.63	5.00e-19	89.70
IUUC-Ete-032466	Echinops telfairi	31.95	2.00e-16	82.00
IUUC-Eca-033447	Equus caballus	34.76	4.00e-19	87.80
IUUC-Eeu-034677	Erinaceus europaeus	33.73	2.00e-20	95.10
IUUC-Fca-035439	Felis catus	33.73	3.00e-20	94.40
IUUC-Fal-037230	Ficedula albicollis	30.05	1.00e-34	142.00
IUUC-Fox-037976	Fusarium oxysporum	29.73	8.00e-18	84.70
IUUC-Fso-038202	Fusarium solani	27.27	1.00e-27	117.00
IUUC-Gmo-038618	Gadus morhua	32.76	4.00e-17	81.30
IUUC-Ggr-040035	Gaeumannomyces graminis	29.79	8.00e-15	74.70
IUUC-Gga-040908	Gallus gallus	30.05	9.00e-36	146.00
IUUC-Gac-041718	Gasterosteus aculeatus	31.18	1.00e-15	76.30
IUUC-Gma-044229	Glycine max	54.81	9.00e-160	556.00
IUUC-Ggo-044567	Gorilla gorilla	35.29	3.00e-20	94.40
IUUC-Hsa-046849	Homo sapiens	34.13	2.00e-20	95.10
IUUC-Hvu-047515	Hordeum vulgare	98.61	1.00e-139	488.00
IUUC-Itr-048832	Ictidomys tridecemlineatus	33.73	3.00e-20	94.70
IUUC-Kpa-049323	Komagataella pastoris	31.69	5.00e-13	68.20
IUUC-Lch-050524	Latimeria chalumnae	30.48	7.00e-37	149.00
IUUC-Lpe-050947	Leersia perrieri	77.67	0.00e+00	844.00
IUUC-Loc-052709	Lepisosteus oculatus	28.72	6.00e-29	123.00
IUUC-Lma-053186	Leptosphaeria maculans	29.55	8.00e-16	78.20
IUUC-Laf-054472	Loxodonta africana	33.73	2.00e-20	95.50
IUUC-Mcc-055743	Macaca mulatta	33.73	2.00e-20	95.50
IUUC-Meu-056399	Macropus eugenii	48.65	2.00e-15	78.60
IUUC-Mor-057073	Magnaporthe oryzae	30.16	1.00e-16	80.90
IUUC-Mpo-057378	Magnaporthe poae	30.37	2.00e-16	80.50
IUUC-Mtr-058761	Medicago truncatula	52.15	1.00e-136	479.00
IUUC-Mla-058840	Melampsora laricipopulina	34.12	2.00e-21	97.10
IUUC-Mga-060129	Meleagris gallopavo	34.91	3.00e-21	97.40
IUUC-Mvi-060424	Microbotryum violaceum	33.71	8.00e-21	94.70
IUUC-Mmr-061295	Microcebus murinus	33.73	1.00e-20	95.50
IUUC-Mdo-062295	Monodelphis domestica	31.06	1.00e-31	132.00
IUUC-Mmu-064009	Mus musculus	34.13	2.00e-20	94.70
IUUC-Mac-064855	Musa acuminata	63.36	0.00e+00	674.00
IUUC-Mpu-065875	Mustela putorius furo	33.73	3.00e-20	94.40
IUUC-Mlu-066941	Myotis lucifugus	33.14	4.00e-20	94.00
IUUC-Nfi-068518	Neosartorya fischeri	24.58	7.00e-23	101.00
IUUC-Ncr-068886	Neurospora crassa	28.94	6.00e-18	85.50
IUUC-Nle-069717	Nomascus leucogenys	33.73	2.00e-20	95.10
IUUC-Opr-070280	Ochotona princeps	33.73	4.00e-20	94.00
IUUC-Ont-071462	Oreochromis niloticus	29.24	3.00e-32	134.00
IUUC-Oan-073300	Ornithorhynchus anatinus	50.00	5.00e-16	80.50
IUUC-Ocu-074124	Oryctolagus cuniculus	33.73	1.00e-20	95.50
IUUC-Oba-075756	Oryza barthii	77.65	0.00e+00	776.00
IUUC-Obr-076580	Oryza brachyantha	79.25	0.00e+00	866.00
IUUC-Ogl-077759	Oryza glaberrima	83.74	0.00e+00	874.00
IUUC-Ogu-078657	Oryza glumaepatula	78.00	0.00e+00	774.00
IUUC-Oin-079481	Oryza indica	81.12	0.00e+00	834.00
IUUC-Olo-081062	Oryza longistaminata	77.55	1.00e-164	572.00
IUUC-Ome-081813	Oryza meridionalis	78.00	0.00e+00	770.00
IUUC-Oni-083007	Oryza nivara	78.00	0.00e+00	775.00
IUUC-Opu-083385	Oryza punctata	77.30	0.00e+00	766.00
IUUC-Oru-084861	Oryza rufipogon	78.00	0.00e+00	776.00
IUUC-Osa-085896	Oryza sativa	84.70	0.00e+00	726.00
IUUC-Ola-086693	Oryzias latipes	28.89	2.00e-27	117.00
IUUC-Olu-087631	Ostreococcus lucimarinus	47.30	9.00e-18	80.50
IUUC-Oga-088262	Otolemur garnettii	33.73	2.00e-20	95.10
IUUC-Oar-089658	Ovis aries	33.73	1.00e-20	95.50
IUUC-Ptr-091311	Pan troglodytes	34.13	2.00e-20	95.10
IUUC-Pan-091925	Papio anubis	33.73	2.00e-20	95.50
IUUC-Psi-093605	Pelodiscus sinensis	34.91	3.00e-21	97.80
IUUC-Pma-094163	Petromyzon marinus	35.54	1.00e-20	92.40
IUUC-Pno-094790	Phaeosphaeria nodorum	30.25	9.00e-13	67.80
IUUC-Ppa-095943	Physcomitrella patens	44.91	1.00e-80	294.00
IUUC-Pfo-096581	Poecilia formosa	28.00	3.00e-31	130.00
IUUC-Pab-098229	Pongo abelii	34.13	2.00e-20	95.50
IUUC-Pop-099598	Populus trichocarpa	56.63	9.00e-165	573.00
IUUC-Pca-100875	Procavia capensis	43.24	6.00e-13	70.10
IUUC-Ppe-101658	Prunus persica	54.52	4.00e-151	528.00
IUUC-Pva-102343	Pteropus vampyrus	33.73	2.00e-20	94.70
IUUC-Pgr-103275	Puccinia graminis	44.44	4.00e-18	86.30
IUUC-Ptt-104004	Puccinia triticina	32.38	7.00e-06	45.10
IUUC-Pte-104161	Pyrenophora teres	30.62	2.00e-13	70.50
IUUC-Pyt-104576	Pyrenophora triticirepentis	30.62	1.00e-13	70.50
IUUC-Rno-105264	Rattus norvegicus	34.13	3.00e-20	94.70
IUUC-Sce-106138	Saccharomyces cerevisiae	28.33	2.00e-18	86.30
IUUC-Sha-107497	Sarcophilus harrisii	34.73	6.00e-21	96.70
IUUC-Sja-107991	Schizosaccharomyces japonicus	28.57	3.00e-32	132.00
IUUC-Spo-108257	Schizosaccharomyces pombe	32.97	2.00e-20	92.80
IUUC-Ssl-108581	Sclerotinia sclerotiorum	30.27	8.00e-16	78.20
IUUC-Smo-109358	Selaginella moellendorffii	64.33	6.00e-68	250.00
IUUC-Sit-109920	Setaria italica	79.87	0.00e+00	836.00
IUUC-Sly-111616	Solanum lycopersicum	54.21	6.00e-160	557.00
IUUC-Stu-112648	Solanum tuberosum	43.18	7.00e-60	223.00
IUUC-Sar-113120	Sorex araneus	33.73	5.00e-21	96.70
IUUC-Sbi-113881	Sorghum bicolor	83.42	0.00e+00	868.00
IUUC-Sre-115127	Sporisorium reilianum	33.52	4.00e-22	99.00
IUUC-Ssc-116147	Sus scrofa	33.73	3.00e-20	94.40
IUUC-Tgu-117215	Taeniopygia guttata	35.33	4.00e-21	97.40
IUUC-Tru-118525	Takifugu rubripes	28.19	1.00e-32	133.00
IUUC-Tsy-119160	Tarsius syrichta	33.73	1.00e-20	95.50
IUUC-Tni-120277	Tetraodon nigroviridis	32.72	2.00e-16	78.60
IUUC-Tca-121727	Theobroma cacao	58.54	8.00e-155	540.00
IUUC-Tre-122181	Trichoderma reesei	29.19	5.00e-16	79.00
IUUC-Tvi-122316	Trichoderma virens	26.02	2.00e-17	83.60
IUUC-Tae-125622	Triticum aestivum	99.84	0.00e+00	1041.00
IUUC-Tur-126827	Triticum urartu	82.45	0.00e+00	1025.00
IUUC-Tme-126984	Tuber melanosporum	26.79	5.00e-32	132.00
IUUC-Tbe-127263	Tupaia belangeri	48.61	1.00e-14	75.90
IUUC-Ttr-128498	Tursiops truncatus	32.54	5.00e-19	90.50
IUUC-Uma-129457	Ustilago maydis	32.89	7.00e-25	108.00
IUUC-Vda-129986	Verticillium dahliae	29.82	1.00e-15	77.40
IUUC-Vpa-130795	Vicugna pacos	35.46	1.00e-16	82.00
IUUC-Vvi-131146	Vitis vinifera	57.95	6.00e-157	547.00
IUUC-Xtr-132789	Xenopus tropicalis	34.73	1.00e-19	92.00
IUUC-Xma-133011	Xiphophorus maculatus	27.36	5.00e-30	125.00
IUUC-Yli-134516	Yarrowia lipolytica	31.74	1.00e-19	90.50
IUUC-Zma-134699	Zea mays	78.38	0.00e+00	865.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence