iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gac-041713

UUCD1 version

UUC-GaA-00213

Ensembl Protein ID

ENSGACP00000005819.1

UniProt Accession

G3NKF6; G3NKF6_GASAC

Protein Name

Uncharacterized protein

Gene Name

STRN (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000004399.1	ENSGACT00000005835.1	ENSGACP00000005819.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-29	101.6	574	604
UBD/Beta-Prp	1.70e-46	159.2	624	787

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtdsv++l + s   +l+s+s+Dgt+++WD
   Q: 574  GHTDSVWGLVYsSAhQRLLSCSGDGTVRLWD 604
           8********99743689************** PP

UBD/Beta-Prp

   S: 12   vitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheae.......vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           v ++v+  s +  +l+t++++g i +++++t +l+ sl+++ ++       ++ v  +p+ +i +t+ eDr+ik +d  +gk +h++ +
   Q: 624  VPSSVDLvSSEPAHLVTSFTNGQIGLFNMETRQLVLSLESNLEPapgtpcqINKVLSHPTLPITITAQEDRHIKFFDNTSGKLIHSMVA 712
           56666666788899************************88777779******************************************* PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           h d v+sl+++p+g +l sGshd  ir+w+l++++c++e     ++ ++++  v++hp++++++s+++D   +++
   Q: 713  HLDAVTSLAVDPNGLYLMSGSHDCSIRLWNLDSKTCIQEftaHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 787
           **************************************8655555556788999***************988887 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLP GGGKGPLPDG DAGEAARAQY SIPGILHFLQ HEWARFEVER 60
AQWDVERAEL QAQIAFLQGE RKGQENLKKD LVRRIKMLEY ALKQERAKYH KLKYGTELNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAGACGG AGCGCAGGCG ATAGGCTTTT GCCCTTCCGT TGACATCGAG CACCTCAAAT 60
CAGCGAGACG ACGGATAGAC CTTTGCACCG AGCCCGGCCA TGGACGAACA GGCGGGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	75.46	0.00e+00	1034.00
IUUC-Apl-003927	Anas platyrhynchos	73.75	0.00e+00	907.00
IUUC-Acl-008170	Aspergillus clavatus	25.29	3.00e-29	123.00
IUUC-Ame-011605	Astyanax mexicanus	77.20	0.00e+00	1078.00
IUUC-Bta-013077	Bos taurus	73.46	0.00e+00	1035.00
IUUC-Cja-018973	Callithrix jacchus	73.21	0.00e+00	1030.00
IUUC-Cfa-020988	Canis familiaris	71.31	0.00e+00	907.00
IUUC-Cpo-022496	Cavia porcellus	73.08	0.00e+00	1031.00
IUUC-Csa-023829	Chlorocebus sabaeus	73.02	0.00e+00	1029.00
IUUC-Csv-026143	Ciona savignyi	58.33	8.00e-131	461.00
IUUC-Dno-029742	Dasypus novemcinctus	70.31	0.00e+00	999.00
IUUC-Dor-030721	Dipodomys ordii	67.58	0.00e+00	935.00
IUUC-Eca-033760	Equus caballus	74.37	0.00e+00	952.00
IUUC-Eeu-034953	Erinaceus europaeus	81.35	0.00e+00	644.00
IUUC-Fca-036530	Felis catus	74.79	0.00e+00	966.00
IUUC-Gmo-039094	Gadus morhua	80.26	0.00e+00	1110.00
IUUC-Gga-040132	Gallus gallus	74.90	0.00e+00	934.00
IUUC-Ggo-045455	Gorilla gorilla	66.25	0.00e+00	889.00
IUUC-Hsa-046415	Homo sapiens	73.08	0.00e+00	1028.00
IUUC-Lch-050475	Latimeria chalumnae	74.84	0.00e+00	1070.00
IUUC-Loc-051859	Lepisosteus oculatus	81.52	0.00e+00	1111.00
IUUC-Laf-053537	Loxodonta africana	73.33	0.00e+00	1044.00
IUUC-Mcc-055817	Macaca mulatta	75.60	0.00e+00	1029.00
IUUC-Meu-055946	Macropus eugenii	53.39	0.00e+00	686.00
IUUC-Mla-058988	Melampsora laricipopulina	34.96	3.00e-62	233.00
IUUC-Mga-059694	Meleagris gallopavo	74.97	0.00e+00	914.00
IUUC-Mmr-060768	Microcebus murinus	73.90	0.00e+00	1040.00
IUUC-Mdo-061901	Monodelphis domestica	68.07	0.00e+00	1023.00
IUUC-Mmu-064154	Mus musculus	72.70	0.00e+00	1026.00
IUUC-Mpu-065827	Mustela putorius furo	68.93	0.00e+00	1019.00
IUUC-Mlu-067102	Myotis lucifugus	75.20	0.00e+00	1023.00
IUUC-Nfi-068560	Neosartorya fischeri	26.03	1.00e-30	128.00
IUUC-Nle-070008	Nomascus leucogenys	74.93	0.00e+00	962.00
IUUC-Ont-072025	Oreochromis niloticus	90.99	0.00e+00	1268.00
IUUC-Oan-072950	Ornithorhynchus anatinus	73.94	0.00e+00	914.00
IUUC-Ocu-074316	Oryctolagus cuniculus	74.62	0.00e+00	951.00
IUUC-Ola-087279	Oryzias latipes	83.52	0.00e+00	1167.00
IUUC-Oga-088284	Otolemur garnettii	72.96	0.00e+00	1037.00
IUUC-Oar-090304	Ovis aries	73.71	0.00e+00	1032.00
IUUC-Ptr-091052	Pan troglodytes	73.21	0.00e+00	1030.00
IUUC-Pan-092270	Papio anubis	71.86	0.00e+00	1015.00
IUUC-Psi-093907	Pelodiscus sinensis	72.73	0.00e+00	832.00
IUUC-Pma-094286	Petromyzon marinus	64.26	3.00e-176	611.00
IUUC-Pfo-097042	Poecilia formosa	89.24	0.00e+00	1349.00
IUUC-Pab-098110	Pongo abelii	73.21	0.00e+00	1030.00
IUUC-Pca-100266	Procavia capensis	62.36	0.00e+00	699.00
IUUC-Pva-102824	Pteropus vampyrus	72.45	0.00e+00	1004.00
IUUC-Rno-105638	Rattus norvegicus	73.46	0.00e+00	1036.00
IUUC-Sha-107004	Sarcophilus harrisii	69.21	0.00e+00	872.00
IUUC-Ssc-115280	Sus scrofa	73.34	0.00e+00	1034.00
IUUC-Tgu-116759	Taeniopygia guttata	74.55	0.00e+00	925.00
IUUC-Tru-117944	Takifugu rubripes	91.37	0.00e+00	1291.00
IUUC-Tni-120571	Tetraodon nigroviridis	90.00	0.00e+00	1305.00
IUUC-Vpa-130294	Vicugna pacos	74.34	0.00e+00	955.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence