iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Fca-035507

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AANG02098019

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFCAG00000004051.3	ENSFCAT00000004052.3	ENSFCAP00000003740.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-09	35.9	129	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 129  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 174
           ********55553322255788*********9......4559*********8 PP

Organism

Felis catus

Protein Sequence
(Fasta)

RKRRGGTVNS RQAQKRTREA ASTPEMALEA EPIELVESAG DEIVDLTCES LEPVVVDLTH 60
NDSVVVSVER RRPRRNARRP RQDHADSCVV SSDDEEVSRD RDVYVTTHTP RHAREEAAAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAAGCGTC GTGGTGGGAC AGTAAATTCT AGACAAGCCC AGAAGCGAAC TCGGGAAGCA 60
GCGTCCACCC CTGAGATGGC CTTGGAAGCG GAGCCCATAG AACTTGTGGA AAGCGGTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	2.00e-10	59.30
IUUC-Aml-002206	Ailuropoda melanoleuca	95.72	2.00e-85	307.00
IUUC-Atr-002771	Amborella trichopoda	34.25	5.00e-10	57.80
IUUC-Apl-004120	Anas platyrhynchos	72.25	5.00e-72	263.00
IUUC-Aca-004236	Anolis carolinensis	62.43	5.00e-60	223.00
IUUC-Ame-011555	Astyanax mexicanus	50.93	7.00e-36	142.00
IUUC-Bta-012913	Bos taurus	87.70	1.00e-85	308.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	1.00e-10	60.10
IUUC-Bol-016418	Brassica oleracea	37.70	5.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	8.00e-08	50.10
IUUC-Cja-019151	Callithrix jacchus	91.49	2.00e-82	297.00
IUUC-Cfa-020868	Canis familiaris	94.21	2.00e-84	304.00
IUUC-Cpo-022249	Cavia porcellus	85.56	8.00e-74	269.00
IUUC-Csa-024125	Chlorocebus sabaeus	89.84	3.00e-82	296.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.30
IUUC-Csv-026318	Ciona savignyi	36.99	5.00e-13	67.40
IUUC-Dre-028145	Danio rerio	42.05	6.00e-32	130.00
IUUC-Dno-029605	Dasypus novemcinctus	90.91	3.00e-90	323.00
IUUC-Dor-030898	Dipodomys ordii	86.63	2.00e-86	311.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	1.00e-10	60.10
IUUC-Ete-032694	Echinops telfairi	84.49	9.00e-72	262.00
IUUC-Eca-033443	Equus caballus	95.72	4.00e-86	309.00
IUUC-Eeu-034603	Erinaceus europaeus	93.20	3.00e-55	206.00
IUUC-Fal-037382	Ficedula albicollis	71.20	1.00e-64	239.00
IUUC-Gmo-038960	Gadus morhua	71.43	6.00e-19	85.90
IUUC-Gga-040493	Gallus gallus	69.84	1.00e-69	255.00
IUUC-Gac-042194	Gasterosteus aculeatus	45.03	1.00e-33	135.00
IUUC-Ggo-044726	Gorilla gorilla	91.44	3.00e-83	300.00
IUUC-Hsa-046212	Homo sapiens	91.44	3.00e-83	300.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	91.98	3.00e-82	297.00
IUUC-Lpe-050920	Leersia perrieri	33.33	2.00e-10	59.30
IUUC-Loc-051907	Lepisosteus oculatus	45.78	1.00e-34	138.00
IUUC-Laf-054145	Loxodonta africana	91.98	7.00e-81	292.00
IUUC-Mcc-055689	Macaca mulatta	90.37	4.00e-82	296.00
IUUC-Meu-056654	Macropus eugenii	48.66	3.00e-42	164.00
IUUC-Mtr-058314	Medicago truncatula	45.45	1.00e-10	58.90
IUUC-Mla-058874	Melampsora laricipopulina	35.85	1.00e-04	41.20
IUUC-Mga-059303	Meleagris gallopavo	70.68	4.00e-71	260.00
IUUC-Mmr-061355	Microcebus murinus	91.44	1.00e-82	298.00
IUUC-Mdo-062968	Monodelphis domestica	68.25	1.00e-68	251.00
IUUC-Mmu-064421	Mus musculus	87.70	8.00e-89	318.00
IUUC-Mac-064573	Musa acuminata	30.69	1.00e-11	63.50
IUUC-Mpu-066522	Mustela putorius furo	95.72	2.00e-85	307.00
IUUC-Mlu-067065	Myotis lucifugus	89.30	2.00e-80	290.00
IUUC-Nle-069198	Nomascus leucogenys	91.98	2.00e-83	301.00
IUUC-Opr-071141	Ochotona princeps	85.03	2.00e-87	314.00
IUUC-Oan-073341	Ornithorhynchus anatinus	67.61	1.00e-35	141.00
IUUC-Ocu-073787	Oryctolagus cuniculus	91.98	5.00e-92	329.00
IUUC-Oba-075460	Oryza barthii	40.32	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	37.70	8.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	36.71	5.00e-12	64.30
IUUC-Ogu-078677	Oryza glumaepatula	40.32	3.00e-11	61.60
IUUC-Oin-079992	Oryza indica	36.71	5.00e-12	64.30
IUUC-Olo-080257	Oryza longistaminata	41.94	2.00e-11	62.40
IUUC-Ome-081943	Oryza meridionalis	36.71	6.00e-12	64.70
IUUC-Oni-082671	Oryza nivara	40.32	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	40.32	6.00e-11	60.80
IUUC-Oru-084650	Oryza rufipogon	40.32	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	36.71	5.00e-12	64.30
IUUC-Ola-086970	Oryzias latipes	40.93	1.00e-32	132.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	3.00e-10	57.80
IUUC-Oga-088242	Otolemur garnettii	91.44	2.00e-91	328.00
IUUC-Oar-089469	Ovis aries	90.37	6.00e-91	326.00
IUUC-Ptr-091254	Pan troglodytes	85.56	7.00e-76	276.00
IUUC-Pan-092776	Papio anubis	90.37	4.00e-82	296.00
IUUC-Psi-093929	Pelodiscus sinensis	69.79	7.00e-67	246.00
IUUC-Pma-094118	Petromyzon marinus	55.38	2.00e-20	89.70
IUUC-Ppa-095567	Physcomitrella patens	44.26	2.00e-11	62.40
IUUC-Pfo-097412	Poecilia formosa	46.63	7.00e-33	133.00
IUUC-Pab-098424	Pongo abelii	91.98	1.00e-83	301.00
IUUC-Pop-099483	Populus trichocarpa	37.10	6.00e-09	53.90
IUUC-Pca-100463	Procavia capensis	89.86	6.00e-51	192.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.30
IUUC-Pva-102594	Pteropus vampyrus	92.03	1.00e-61	228.00
IUUC-Rno-105460	Rattus norvegicus	87.30	5.00e-80	290.00
IUUC-Sha-107487	Sarcophilus harrisii	70.37	6.00e-69	253.00
IUUC-Sit-109959	Setaria italica	36.07	4.00e-05	42.40
IUUC-Stu-112694	Solanum tuberosum	39.06	4.00e-09	54.70
IUUC-Sar-113601	Sorex araneus	88.24	4.00e-82	296.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	9.00e-05	40.40
IUUC-Ssc-115911	Sus scrofa	94.12	2.00e-84	304.00
IUUC-Tgu-117264	Taeniopygia guttata	73.02	2.00e-64	238.00
IUUC-Tru-117663	Takifugu rubripes	49.06	6.00e-35	139.00
IUUC-Tsy-118883	Tarsius syrichta	87.16	2.00e-66	244.00
IUUC-Tae-123990	Triticum aestivum	37.10	1.00e-06	45.80
IUUC-Tur-126408	Triticum urartu	39.34	2.00e-10	59.70
IUUC-Ttr-128950	Tursiops truncatus	68.45	5.00e-67	246.00
IUUC-Vvi-130833	Vitis vinifera	40.32	4.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	58.17	2.00e-39	154.00
IUUC-Xma-133319	Xiphophorus maculatus	46.62	1.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence