iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093550

Ensembl Protein ID

ENSPSIP00000007266.1

UniProt Accession

K7FGV6; K7FGV6_PELSI

Genbank Protein ID

ENSPSIP00000007266

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01168363

Gene Name

KDM5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000006292.1	ENSPSIT00000007307.1	ENSPSIP00000007266.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.30e-21	74.3	259	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vCl+Cg+g +++ +l+ C+ C++ +H  Cl ++  +++p+ + w CpkC +
   Q: 259  VCLFCGRGNNED-KLLLCDGCDDSYHTFCLIPP-LPDVPKGD-WRCPKCVA 306
           8*********88.6*******************.*******7.******75 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

GRVRLRLAEK TGICKIRPPK DWQPPFACEV QNFRFTPRVQ RLNELEAMTR VKLDFLDQLA 60
KFWELQGSTL KIPVVERKIL DLYSLSKIVA SKGGFEVVTK EKKWSKVASR LGYLPGKGTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGAGTCA GACTCAGGGA GGAGGAAAAA ACACACACAC ACAACAAAAC CCGACGGGGA 60
GACACAAACA AACGGGAGGA GACGCCGCGG CGGGGCNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0019907--C:cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032993--C:protein-DNA complex
GO:0031490--F:chromatin DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003713--F:transcription coactivator activity
GO:0008270--F:zinc ion binding
GO:0032922--P:circadian regulation of gene expression
GO:0034720--P:histone H3-K4 demethylation
GO:1901726--P:negative regulation of histone deacetylase activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045893--P:positive regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	30.33	2.00e-96	348.00
IUUC-Aml-002061	Ailuropoda melanoleuca	91.86	0.00e+00	2782.00
IUUC-Atr-002595	Amborella trichopoda	30.88	3.00e-115	410.00
IUUC-Apl-004141	Anas platyrhynchos	95.17	0.00e+00	2931.00
IUUC-Aca-004952	Anolis carolinensis	92.94	0.00e+00	2893.00
IUUC-Acl-008162	Aspergillus clavatus	31.06	4.00e-118	419.00
IUUC-Afl-008625	Aspergillus flavus	29.81	4.00e-115	409.00
IUUC-Afu-008796	Aspergillus fumigatus	29.68	5.00e-116	412.00
IUUC-Aor-010155	Aspergillus oryzae	29.81	4.00e-115	409.00
IUUC-Ate-010453	Aspergillus terreus	30.75	9.00e-114	405.00
IUUC-Ame-011323	Astyanax mexicanus	79.06	0.00e+00	1976.00
IUUC-Bgr-012241	Blumeria graminis	30.19	6.00e-114	405.00
IUUC-Bta-012902	Bos taurus	90.79	0.00e+00	2806.00
IUUC-Bdi-014050	Brachypodium distachyon	29.02	2.00e-112	401.00
IUUC-Bra-017998	Brassica rapa	43.59	3.00e-13	71.60
IUUC-Cja-018988	Callithrix jacchus	89.46	0.00e+00	2640.00
IUUC-Cfa-020212	Canis familiaris	90.89	0.00e+00	2745.00
IUUC-Cpo-022221	Cavia porcellus	92.12	0.00e+00	2008.00
IUUC-Csa-023575	Chlorocebus sabaeus	91.88	0.00e+00	2713.00
IUUC-Cho-024280	Choloepus hoffmanni	87.27	0.00e+00	2568.00
IUUC-Cin-025321	Ciona intestinalis	49.06	0.00e+00	1095.00
IUUC-Csv-026185	Ciona savignyi	47.50	0.00e+00	1134.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	28.72	2.00e-108	388.00
IUUC-Dre-027909	Danio rerio	76.99	0.00e+00	1676.00
IUUC-Dno-029473	Dasypus novemcinctus	91.89	0.00e+00	2608.00
IUUC-Dor-030281	Dipodomys ordii	88.55	0.00e+00	1195.00
IUUC-Dse-031479	Dothistroma septosporum	30.67	3.00e-105	377.00
IUUC-Dme-032021	Drosophila melanogaster	46.85	0.00e+00	1082.00
IUUC-Eca-034265	Equus caballus	91.74	0.00e+00	2799.00
IUUC-Eeu-034692	Erinaceus europaeus	58.43	0.00e+00	1119.00
IUUC-Fca-035476	Felis catus	91.85	0.00e+00	2778.00
IUUC-Fal-037078	Ficedula albicollis	94.69	0.00e+00	2554.00
IUUC-Fso-038127	Fusarium solani	28.91	8.00e-113	402.00
IUUC-Gmo-039140	Gadus morhua	53.52	0.00e+00	1335.00
IUUC-Gga-040466	Gallus gallus	93.48	0.00e+00	2923.00
IUUC-Gac-042566	Gasterosteus aculeatus	76.58	0.00e+00	2136.00
IUUC-Ggo-044524	Gorilla gorilla	85.38	0.00e+00	2395.00
IUUC-Hsa-045821	Homo sapiens	91.62	0.00e+00	2802.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	56.82	0.00e+00	1393.00
IUUC-Kpa-049245	Komagataella pastoris	21.02	8.00e-29	122.00
IUUC-Lch-050630	Latimeria chalumnae	75.50	0.00e+00	2120.00
IUUC-Lpe-051537	Leersia perrieri	31.29	8.00e-91	329.00
IUUC-Loc-051963	Lepisosteus oculatus	76.64	0.00e+00	2072.00
IUUC-Laf-053918	Loxodonta africana	85.73	0.00e+00	2419.00
IUUC-Mcc-055672	Macaca mulatta	90.30	0.00e+00	2803.00
IUUC-Meu-056643	Macropus eugenii	56.00	0.00e+00	1372.00
IUUC-Mor-057198	Magnaporthe oryzae	29.47	7.00e-116	412.00
IUUC-Mtr-058113	Medicago truncatula	30.10	4.00e-97	350.00
IUUC-Mga-059192	Meleagris gallopavo	85.45	0.00e+00	2529.00
IUUC-Mmr-060968	Microcebus murinus	90.30	0.00e+00	2797.00
IUUC-Mdo-062945	Monodelphis domestica	92.76	0.00e+00	2731.00
IUUC-Mmu-063614	Mus musculus	90.65	0.00e+00	2781.00
IUUC-Mpu-066349	Mustela putorius furo	92.00	0.00e+00	2691.00
IUUC-Mlu-067363	Myotis lucifugus	91.56	0.00e+00	2852.00
IUUC-Nfi-068430	Neosartorya fischeri	29.93	8.00e-116	412.00
IUUC-Nle-070142	Nomascus leucogenys	91.68	0.00e+00	2815.00
IUUC-Opr-071002	Ochotona princeps	84.54	0.00e+00	1346.00
IUUC-Ont-072471	Oreochromis niloticus	79.46	0.00e+00	1929.00
IUUC-Oan-072797	Ornithorhynchus anatinus	78.66	0.00e+00	1984.00
IUUC-Ocu-074164	Oryctolagus cuniculus	90.84	0.00e+00	2857.00
IUUC-Oba-075388	Oryza barthii	29.54	7.00e-73	269.00
IUUC-Obr-076296	Oryza brachyantha	32.02	2.00e-88	322.00
IUUC-Ogu-079040	Oryza glumaepatula	29.54	2.00e-73	271.00
IUUC-Ome-081764	Oryza meridionalis	31.90	8.00e-91	329.00
IUUC-Oni-083012	Oryza nivara	29.54	5.00e-73	270.00
IUUC-Opu-083164	Oryza punctata	30.69	3.00e-87	317.00
IUUC-Oru-084630	Oryza rufipogon	29.54	6.00e-73	270.00
IUUC-Ola-087076	Oryzias latipes	75.79	0.00e+00	2107.00
IUUC-Oga-088350	Otolemur garnettii	89.45	0.00e+00	2716.00
IUUC-Oar-090045	Ovis aries	90.67	0.00e+00	2810.00
IUUC-Ptr-091199	Pan troglodytes	91.91	0.00e+00	2801.00
IUUC-Pan-092094	Papio anubis	87.46	0.00e+00	2745.00
IUUC-Pma-094137	Petromyzon marinus	53.34	0.00e+00	1287.00
IUUC-Pno-094879	Phaeosphaeria nodorum	29.57	3.00e-117	417.00
IUUC-Pfo-097266	Poecilia formosa	76.36	0.00e+00	2138.00
IUUC-Pab-098576	Pongo abelii	91.80	0.00e+00	2805.00
IUUC-Pca-100123	Procavia capensis	90.28	0.00e+00	1604.00
IUUC-Pva-103109	Pteropus vampyrus	86.49	0.00e+00	2629.00
IUUC-Pgr-103434	Puccinia graminis	36.03	4.00e-22	98.60
IUUC-Pte-104195	Pyrenophora teres	30.01	1.00e-122	434.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	30.10	1.00e-124	441.00
IUUC-Rno-105664	Rattus norvegicus	90.71	0.00e+00	2781.00
IUUC-Sha-107506	Sarcophilus harrisii	91.61	0.00e+00	2515.00
IUUC-Sja-107734	Schizosaccharomyces japonicus	20.72	2.00e-31	131.00
IUUC-Spo-108283	Schizosaccharomyces pombe	22.43	2.00e-53	204.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	29.17	4.00e-115	409.00
IUUC-Smo-108843	Selaginella moellendorffii	52.08	1.00e-10	62.00
IUUC-Sit-110534	Setaria italica	29.77	4.00e-109	390.00
IUUC-Sly-111298	Solanum lycopersicum	31.10	6.00e-103	369.00
IUUC-Sar-113052	Sorex araneus	90.35	0.00e+00	2789.00
IUUC-Sre-115161	Sporisorium reilianum	29.56	2.00e-119	424.00
IUUC-Ssc-116354	Sus scrofa	56.84	0.00e+00	1382.00
IUUC-Tgu-116613	Taeniopygia guttata	93.66	0.00e+00	2883.00
IUUC-Tru-118604	Takifugu rubripes	75.99	0.00e+00	2167.00
IUUC-Tsy-119237	Tarsius syrichta	91.83	0.00e+00	1258.00
IUUC-Tni-120779	Tetraodon nigroviridis	75.50	0.00e+00	2146.00
IUUC-Tca-121478	Theobroma cacao	31.85	8.00e-105	375.00
IUUC-Tre-122213	Trichoderma reesei	29.57	4.00e-115	409.00
IUUC-Tvi-122263	Trichoderma virens	28.50	2.00e-112	400.00
IUUC-Tae-125894	Triticum aestivum	28.87	3.00e-101	363.00
IUUC-Tur-126632	Triticum urartu	30.66	6.00e-97	349.00
IUUC-Tme-127087	Tuber melanosporum	30.06	4.00e-123	436.00
IUUC-Tbe-128040	Tupaia belangeri	67.92	0.00e+00	771.00
IUUC-Ttr-129242	Tursiops truncatus	89.99	0.00e+00	2558.00
IUUC-Uma-129590	Ustilago maydis	29.48	3.00e-127	450.00
IUUC-Vpa-130429	Vicugna pacos	86.20	0.00e+00	1405.00
IUUC-Xtr-131762	Xenopus tropicalis	76.18	0.00e+00	2119.00
IUUC-Xma-133693	Xiphophorus maculatus	76.46	0.00e+00	2159.00
IUUC-Zma-135829	Zea mays	28.93	5.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence