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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105919
UUCD1 version UUC-RaN-01110
Ensembl Protein ID ENSRNOP00000047375.3
UniProt Accession D4A5S1; D4A5S1_RAT
Genbank Protein ID EDM10949.1
Protein Name RCG53229; Ubiquitin-specific peptidase 26
Genbank Nucleotide ID AABR07041762
Gene Name Usp26; rCG_53229
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000029106.5 ENSRNOT00000047605.5 ENSRNOP00000047375.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.90e-63 215.1 287 807
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
    +Gl N+gNtCY+N vLQ+L +ip + ++l++ + +++ +p++++ ++ +++ +++ ++++ ++kal + e f +q
   Q: 287 QGLPNVGNTCYINVVLQSLCSIPLFVNDLFN---QGFPWIKPPKDDFNMRLMQLLVLKDIYNARTRQKLLIGITKALPIFGEVFAADRQ 372
    6******************************...*****9886666666555555667788999999999999*****999******** PP
   S: 90 qDaqEflaflldqleeelkkeknkpkeeeeeedkselsde...aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
    +Da+Efl+ +l ql+e++++ n +++e+e+ + l +e + + ++ ++++++F+++l s+i c++c+ + ++ep +ls++
   Q: 373 NDAHEFLSLCLVQLKETVQR-VNMMWQSENESGDYYLLREifaNYTSINRTPVCPVTNNFEFELLSSIFCKACGLTVFKREPSRYLSIN 460
    ******************55.55555555555555554445644444444455************************************ PP
   S: 176 vpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspf 264
    +p+ + ++ s+q++L+ f+++eele ce+c + +++ +k+ +lP+v+i+hLkR+sfse++ + +k ++++ + + L ls +
   Q: 461 IPQGMKDQNMSIQSSLDLFFRAEELE----HRCERCL-YNKSVALHKFGRLPRVIIVHLKRYSFSESRIM-NKDEQHIVISKYLRLSCH 543
    *****9********************....59****8.5669**********************999655.699*******9******* PP
   S: 265 cts...................................................................................... 267
    c++
   Q: 544 CNKntkppqpllpnehvknldllrpleelgseilklssnsgrtsrskvfptvnirsdkelevqngkrvsevssgsaqqedpgkganvvr 632
    ***99999999999999999999999999999999999999999999999999999999999999999999999999999999999999 PP
   S: 268 ......................................................................................... 267
   
   Q: 633 seltnetetikhekeyvlsdldsgsiseersqkcqeaekcnkealpqscpkpssqeqtenlgkpavshtqngslssqgssdsskspgcn 721
    99999999999999999999999999888888888888888888888888888888777777777777777777777777777777777 PP
   S: 268 ..............peekqkekkkYeLiavvvHsG.slssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
    ++ +qke+++Y+L+++++H G s+++GHY+ ++ + +++ W++++D +Vt ++e+ v + + st+Yv+fY++
   Q: 722 dvfdkakptskvepQKLNQKEDNIYRLVSIINHIGnSPNGGHYINDAFDFRKQsWFTYSDLQVTGIQEDLVYKARLSTGYVFFYMH 807
    777777777777766666666****************************88888*******************999********98 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MDPVLIHAQV QLWSAKAGMS KSRNAFIETF IGKREVKLIL YFSTGKIKAL QLYNNIKSVV 60
LRTYGEDQNY LHLTFKNNDF LFVEKLTTMD ARRLKRFLDK IYQSNLRAAR RSGERPGDPS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105919|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCACAACCAA TCTAGGTCCG TGGAGGTGGT ACCATAAACT GCCTATAAAA GGAGGCTCAC 60
AGGGTGCTCG GCCTCCATTT TGTCTCAGCT TTCGGGGTGT GCTGTGGTAG ATTCTCTGTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105919|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR032069--USP37-like_PH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH
PF16674--UCH_N

Gene Ontology

GO:0005634--C:nucleus
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG rno:302488
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Cpo-022049 Cavia porcellus 39.89 7.00e-113 401.00
IUUC-Dor-030370 Dipodomys ordii 37.26 5.00e-153 535.00
IUUC-Ete-033046 Echinops telfairi 35.46 3.00e-90 326.00
IUUC-Fca-035628 Felis catus 37.94 4.00e-153 535.00
IUUC-Itr-047983 Ictidomys tridecemlineatus 40.90 1.00e-174 607.00
IUUC-Mmu-063365 Mus musculus 75.06 0.00e+00 1222.00
IUUC-Sar-113624 Sorex araneus 35.50 8.00e-90 325.00
Created Date 25-Jun-2017

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