iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116107

Ensembl Protein ID

ENSSSCP00000013891.2

UniProt Accession

F1RPX2; F1RPX2_PIG

Genbank Protein ID

ENSSSCP00000013891

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312617

Gene Name

EML3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000013061.2	ENSSSCT00000014277.2	ENSSSCP00000013891.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-15	56.8	596	626

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWD 29
           gHtd+ ++l+    + ++++++++D ++ +WD
   Q: 596  GHTDELWGLCThpfQ-NRFLTCGHDRQLCLWD 626
           8*******9877543.89************** PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MDGAGGPAEG PAQEALQSLS RRLQVQEKEM ELVKAALAEA LRLLRLQVPP SPLQDPGTPG 60
PPRDSPATPP GLPPTCNPSF VSRGTQTEVE VEMEPSPGPP GLSNGPPAPQ GGSEEPSGTQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN CCTTGCCCCT TCGGAAAAGC CCCGCCCCCG GGCAAAGGGC 60
CTCTTTCGTG ACCCCGCCCC TGCCCCCTCG CGGAAGTGGG GAGGGGCAGG TCGGTTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0008017--F:microtubule binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002054	Ailuropoda melanoleuca	92.08	0.00e+00	1172.00
IUUC-Ame-011151	Astyanax mexicanus	65.62	0.00e+00	932.00
IUUC-Bta-012809	Bos taurus	96.02	0.00e+00	1404.00
IUUC-Cja-019497	Callithrix jacchus	94.52	0.00e+00	1417.00
IUUC-Cfa-020836	Canis familiaris	93.88	0.00e+00	1428.00
IUUC-Cpo-021285	Cavia porcellus	89.31	0.00e+00	1358.00
IUUC-Csa-023442	Chlorocebus sabaeus	93.91	0.00e+00	1406.00
IUUC-Cho-024509	Choloepus hoffmanni	88.00	2.00e-128	452.00
IUUC-Dre-027697	Danio rerio	65.97	0.00e+00	1005.00
IUUC-Dno-029179	Dasypus novemcinctus	92.23	0.00e+00	1388.00
IUUC-Dor-030271	Dipodomys ordii	92.82	0.00e+00	1366.00
IUUC-Eca-033995	Equus caballus	96.53	0.00e+00	1421.00
IUUC-Eeu-034661	Erinaceus europaeus	89.02	6.00e-143	501.00
IUUC-Fca-036507	Felis catus	94.79	0.00e+00	1443.00
IUUC-Gmo-038631	Gadus morhua	66.26	0.00e+00	898.00
IUUC-Gga-041067	Gallus gallus	73.90	0.00e+00	978.00
IUUC-Gac-042487	Gasterosteus aculeatus	63.72	0.00e+00	890.00
IUUC-Ggo-044578	Gorilla gorilla	95.49	0.00e+00	1300.00
IUUC-Hsa-045907	Homo sapiens	94.19	0.00e+00	1238.00
IUUC-Itr-047963	Ictidomys tridecemlineatus	94.10	0.00e+00	1456.00
IUUC-Laf-054051	Loxodonta africana	92.46	0.00e+00	1487.00
IUUC-Mcc-055534	Macaca mulatta	94.03	0.00e+00	1238.00
IUUC-Meu-056318	Macropus eugenii	87.93	0.00e+00	1083.00
IUUC-Mmr-060972	Microcebus murinus	92.35	0.00e+00	1210.00
IUUC-Mdo-062421	Monodelphis domestica	88.59	0.00e+00	1252.00
IUUC-Mmu-064240	Mus musculus	92.20	0.00e+00	1407.00
IUUC-Mpu-065950	Mustela putorius furo	96.44	0.00e+00	1414.00
IUUC-Mlu-067823	Myotis lucifugus	91.44	0.00e+00	1179.00
IUUC-Nle-069939	Nomascus leucogenys	93.22	0.00e+00	1391.00
IUUC-Opr-070593	Ochotona princeps	91.19	0.00e+00	1247.00
IUUC-Ont-072032	Oreochromis niloticus	66.48	0.00e+00	982.00
IUUC-Oan-073228	Ornithorhynchus anatinus	92.24	0.00e+00	1206.00
IUUC-Ocu-074660	Oryctolagus cuniculus	93.06	0.00e+00	1361.00
IUUC-Ola-087269	Oryzias latipes	65.11	0.00e+00	971.00
IUUC-Oga-088749	Otolemur garnettii	94.16	0.00e+00	1243.00
IUUC-Oar-090190	Ovis aries	95.16	0.00e+00	1441.00
IUUC-Pan-091858	Papio anubis	94.14	0.00e+00	1420.00
IUUC-Psi-093997	Pelodiscus sinensis	76.99	0.00e+00	1077.00
IUUC-Pfo-096045	Poecilia formosa	65.59	0.00e+00	953.00
IUUC-Pab-098492	Pongo abelii	94.54	0.00e+00	1375.00
IUUC-Pca-100221	Procavia capensis	82.92	0.00e+00	1315.00
IUUC-Pva-103024	Pteropus vampyrus	94.04	0.00e+00	1387.00
IUUC-Rno-105563	Rattus norvegicus	92.42	0.00e+00	1496.00
IUUC-Sha-106886	Sarcophilus harrisii	89.92	0.00e+00	1033.00
IUUC-Ttr-128375	Tursiops truncatus	90.47	0.00e+00	1281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence