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Tag Content
UUCD2 ID IUUC-Zma-135816
UUCD1 version UUC-ZeM-01090
Ensembl Protein ID Zm00001d020011_T001
UniProt Accession B4FPK4; B4FPK4_MAIZE
Genbank Protein ID ACF84047.1; ONM54088.1
Protein Name THO complex subunit 3
Genbank Nucleotide ID BT039042; CM007650
Gene Name ZEAMMB73_Zm00001d020011
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Zm00001d020011 Zm00001d020011_T004 Zm00001d020011_T004
Zm00001d020011 Zm00001d020011_T007 Zm00001d020011_T007
Zm00001d020011 Zm00001d020011_T005 Zm00001d020011_T005
Zm00001d020011 Zm00001d020011_T003 Zm00001d020011_T003
Zm00001d020011 Zm00001d020011_T002 Zm00001d020011_T002
Zm00001d020011 Zm00001d020011_T001 Zm00001d020011_T001
Zm00001d020011 Zm00001d020011_T006 Zm00001d020011_T006
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-24 87.3 82 119
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtdsv  l++  +  +++++++ D++i++WD r+g++
   Q: 82   GHTDSVDQLCWdpNHpDTVATAAADKSIRLWDARSGKC 119
           8***********644788*****************998 PP
   
Organism Zea mays
Protein Sequence
(Fasta)
MESREEERKG SGGAAAGGGS TPGANLRDLV SREYYGHKKK VHSVAWNCLG TKLASGSIDH 60
TARVWSIDPH VHSKVKDIEL KGHTDSVDQL CWDPNHPDTV ATAAADKSIR LWDARSGKCQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Zma-135816|E3,WD_repeat|Zea mays
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAATTGGATT ACTCCCCTCC CGGACAAAAC GGGGCGAGAG CGCATGGAGA GCAGAGAGGA 60
GGAGAGGAAG GGCAGCGGTG GCGCCGCCGC CGGCGGCGGC TCGACCCCTG GGGCGAATCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Zma-135816|E3,WD_repeat|Zea mays
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0000347--C:THO complex
GO:0010267--P:production of ta-siRNAs involved in RNA interference
KEGG zma:100272607
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000099 Aegilops tauschii 88.14 2.00e-156 544.00
IUUC-Aml-001264 Ailuropoda melanoleuca 49.17 3.00e-82 298.00
IUUC-Atr-003050 Amborella trichopoda 73.29 8.00e-137 479.00
IUUC-Apl-003426 Anas platyrhynchos 44.27 7.00e-60 223.00
IUUC-Aca-004931 Anolis carolinensis 48.33 8.00e-55 206.00
IUUC-Aly-006237 Arabidopsis lyrata 75.00 1.00e-137 481.00
IUUC-Ath-007581 Arabidopsis thaliana 75.00 2.00e-137 481.00
IUUC-Acl-008253 Aspergillus clavatus 27.30 3.00e-33 135.00
IUUC-Afl-008519 Aspergillus flavus 32.89 9.00e-39 153.00
IUUC-Afu-008886 Aspergillus fumigatus 26.27 5.00e-31 128.00
IUUC-Ani-009275 Aspergillus nidulans 30.72 6.00e-36 144.00
IUUC-Ang-009862 Aspergillus niger 31.96 1.00e-37 149.00
IUUC-Ate-010247 Aspergillus terreus 30.25 3.00e-35 142.00
IUUC-Ame-010828 Astyanax mexicanus 49.34 5.00e-83 300.00
IUUC-Bgr-012163 Blumeria graminis 30.00 2.00e-32 131.00
IUUC-Bta-013514 Bos taurus 43.23 5.00e-69 253.00
IUUC-Bci-013639 Botrytis cinerea 30.28 6.00e-40 157.00
IUUC-Bdi-015049 Brachypodium distachyon 82.49 3.00e-161 560.00
IUUC-Bol-015401 Brassica oleracea 73.57 2.00e-134 471.00
IUUC-Bra-017867 Brassica rapa 73.57 1.00e-134 471.00
IUUC-Cel-018699 Caenorhabditis elegans 28.93 2.00e-28 119.00
IUUC-Cja-019591 Callithrix jacchus 49.50 7.00e-83 300.00
IUUC-Cfa-020692 Canis familiaris 49.17 3.00e-82 298.00
IUUC-Cpo-022135 Cavia porcellus 43.28 4.00e-65 241.00
IUUC-Cre-022572 Chlamydomonas reinhardtii 33.67 1.00e-44 172.00
IUUC-Csa-023408 Chlorocebus sabaeus 49.17 2.00e-82 298.00
IUUC-Cho-024340 Choloepus hoffmanni 47.55 6.00e-50 189.00
IUUC-Cin-025418 Ciona intestinalis 52.71 4.00e-40 155.00
IUUC-Csv-026130 Ciona savignyi 50.83 1.00e-87 315.00
IUUC-Cgl-026744 Colletotrichum gloeosporioides 29.50 7.00e-40 157.00
IUUC-Cne-026775 Cryptococcus neoformans 42.16 1.00e-20 94.00
IUUC-Dre-028634 Danio rerio 50.00 4.00e-84 303.00
IUUC-Dno-029449 Dasypus novemcinctus 49.17 3.00e-82 298.00
IUUC-Dor-030301 Dipodomys ordii 53.85 1.00e-45 176.00
IUUC-Dse-031341 Dothistroma septosporum 28.32 2.00e-29 122.00
IUUC-Dme-031674 Drosophila melanogaster 48.83 3.00e-77 281.00
IUUC-Ete-033136 Echinops telfairi 48.51 1.00e-80 293.00
IUUC-Eca-034432 Equus caballus 44.92 2.00e-74 271.00
IUUC-Fca-035694 Felis catus 49.17 3.00e-82 298.00
IUUC-Fal-037328 Ficedula albicollis 49.50 4.00e-83 300.00
IUUC-Fox-037894 Fusarium oxysporum 31.00 6.00e-42 164.00
IUUC-Fso-038266 Fusarium solani 29.64 2.00e-38 152.00
IUUC-Gmo-039617 Gadus morhua 50.50 2.00e-83 301.00
IUUC-Ggr-039819 Gaeumannomyces graminis 26.25 6.00e-32 130.00
IUUC-Gga-041164 Gallus gallus 49.50 1.00e-82 299.00
IUUC-Gac-042407 Gasterosteus aculeatus 50.83 4.00e-84 304.00
IUUC-Gma-043718 Glycine max 72.46 6.00e-136 476.00
IUUC-Ggo-044989 Gorilla gorilla 49.17 2.00e-82 298.00
IUUC-Hsa-046784 Homo sapiens 49.17 2.00e-82 298.00
IUUC-Hvu-047633 Hordeum vulgare 86.51 2.00e-110 390.00
IUUC-Itr-048184 Ictidomys tridecemlineatus 34.94 3.00e-46 178.00
IUUC-Lch-049894 Latimeria chalumnae 49.17 2.00e-82 298.00
IUUC-Lpe-051061 Leersia perrieri 77.10 2.00e-138 484.00
IUUC-Loc-052424 Lepisosteus oculatus 50.17 8.00e-84 303.00
IUUC-Lma-053127 Leptosphaeria maculans 31.58 5.00e-42 165.00
IUUC-Laf-053396 Loxodonta africana 49.50 1.00e-82 299.00
IUUC-Mcc-055517 Macaca mulatta 49.17 2.00e-82 298.00
IUUC-Meu-056034 Macropus eugenii 49.17 6.00e-82 296.00
IUUC-Mor-057011 Magnaporthe oryzae 24.20 2.00e-19 89.70
IUUC-Mpo-057490 Magnaporthe poae 26.48 2.00e-32 132.00
IUUC-Mtr-057927 Medicago truncatula 72.88 4.00e-137 479.00
IUUC-Mla-058945 Melampsora laricipopulina 34.47 1.00e-46 179.00
IUUC-Mga-060155 Meleagris gallopavo 50.83 9.00e-69 252.00
IUUC-Mvi-060344 Microbotryum violaceum 29.58 9.00e-38 150.00
IUUC-Mmr-060834 Microcebus murinus 49.50 2.00e-82 298.00
IUUC-Mdo-062587 Monodelphis domestica 49.17 8.00e-82 296.00
IUUC-Mmu-063395 Mus musculus 49.17 3.00e-82 298.00
IUUC-Mac-064579 Musa acuminata 76.87 1.00e-142 498.00
IUUC-Mpu-066688 Mustela putorius furo 51.97 7.00e-74 270.00
IUUC-Mlu-067299 Myotis lucifugus 49.17 7.00e-82 296.00
IUUC-Nfi-068562 Neosartorya fischeri 26.88 1.00e-31 129.00
IUUC-Ncr-068654 Neurospora crassa 27.87 1.00e-33 136.00
IUUC-Nle-069736 Nomascus leucogenys 48.51 3.00e-80 291.00
IUUC-Ont-071763 Oreochromis niloticus 50.17 1.00e-83 302.00
IUUC-Ocu-074909 Oryctolagus cuniculus 49.17 2.00e-82 298.00
IUUC-Oba-075902 Oryza barthii 78.06 9.00e-140 488.00
IUUC-Obr-076613 Oryza brachyantha 85.81 5.00e-159 552.00
IUUC-Ogl-077009 Oryza glaberrima 86.77 1.00e-160 558.00
IUUC-Ogu-078344 Oryza glumaepatula 78.06 9.00e-140 488.00
IUUC-Oin-079773 Oryza indica 86.77 1.00e-160 558.00
IUUC-Olo-080474 Oryza longistaminata 84.08 9.00e-96 342.00
IUUC-Ome-081837 Oryza meridionalis 80.49 9.00e-73 265.00
IUUC-Oni-082263 Oryza nivara 78.06 9.00e-140 488.00
IUUC-Opu-083813 Oryza punctata 86.45 4.00e-160 556.00
IUUC-Oru-084610 Oryza rufipogon 78.06 8.00e-140 488.00
IUUC-Osa-085415 Oryza sativa 86.45 4.00e-160 556.00
IUUC-Ola-086659 Oryzias latipes 50.83 2.00e-84 305.00
IUUC-Olu-087649 Ostreococcus lucimarinus 41.34 1.00e-54 206.00
IUUC-Oga-087923 Otolemur garnettii 48.84 6.00e-82 296.00
IUUC-Oar-089688 Ovis aries 49.17 6.00e-82 296.00
IUUC-Ptr-091628 Pan troglodytes 49.17 2.00e-82 298.00
IUUC-Pan-092586 Papio anubis 48.37 2.00e-81 295.00
IUUC-Psi-093701 Pelodiscus sinensis 50.26 8.00e-54 202.00
IUUC-Pma-094465 Petromyzon marinus 49.34 3.00e-81 294.00
IUUC-Pno-094767 Phaeosphaeria nodorum 31.99 4.00e-39 155.00
IUUC-Ppa-095195 Physcomitrella patens 72.46 2.00e-135 474.00
IUUC-Pfo-097383 Poecilia formosa 49.50 2.00e-82 298.00
IUUC-Pab-098669 Pongo abelii 49.17 1.00e-82 299.00
IUUC-Pop-099409 Populus trichocarpa 73.62 2.00e-136 478.00
IUUC-Pca-100769 Procavia capensis 43.89 3.00e-65 241.00
IUUC-Ppe-101321 Prunus persica 73.86 4.00e-136 476.00
IUUC-Pva-102759 Pteropus vampyrus 49.17 2.00e-82 298.00
IUUC-Pgr-103535 Puccinia graminis 35.78 2.00e-52 198.00
IUUC-Ptt-103820 Puccinia triticina 35.46 1.00e-51 196.00
IUUC-Pte-104271 Pyrenophora teres 30.80 2.00e-36 145.00
IUUC-Pyt-104500 Pyrenophora triticirepentis 31.15 2.00e-32 133.00
IUUC-Rno-106126 Rattus norvegicus 49.17 2.00e-82 298.00
IUUC-Sce-106455 Saccharomyces cerevisiae 23.08 2.00e-12 66.60
IUUC-Sha-107146 Sarcophilus harrisii 48.18 1.00e-79 289.00
IUUC-Sja-107865 Schizosaccharomyces japonicus 36.73 3.00e-49 187.00
IUUC-Spo-108324 Schizosaccharomyces pombe 36.63 2.00e-49 189.00
IUUC-Smo-108990 Selaginella moellendorffii 68.04 7.00e-128 449.00
IUUC-Sit-110773 Setaria italica 92.81 0.00e+00 629.00
IUUC-Sly-111619 Solanum lycopersicum 74.84 8.00e-141 492.00
IUUC-Stu-112241 Solanum tuberosum 74.84 5.00e-140 489.00
IUUC-Sbi-114842 Sorghum bicolor 96.99 0.00e+00 641.00
IUUC-Sre-115070 Sporisorium reilianum 34.57 6.00e-48 184.00
IUUC-Ssc-115581 Sus scrofa 49.17 2.00e-82 298.00
IUUC-Tgu-117354 Taeniopygia guttata 50.35 1.00e-82 299.00
IUUC-Tru-117745 Takifugu rubripes 48.34 3.00e-82 298.00
IUUC-Tni-120050 Tetraodon nigroviridis 48.01 2.00e-80 292.00
IUUC-Tca-121279 Theobroma cacao 73.86 6.00e-138 483.00
IUUC-Tre-121952 Trichoderma reesei 30.36 5.00e-42 164.00
IUUC-Tvi-122581 Trichoderma virens 30.36 2.00e-42 165.00
IUUC-Tae-125697 Triticum aestivum 81.60 1.00e-160 558.00
IUUC-Tur-126279 Triticum urartu 80.00 3.00e-155 540.00
IUUC-Tme-127000 Tuber melanosporum 31.20 2.00e-38 152.00
IUUC-Ttr-128405 Tursiops truncatus 49.42 1.00e-71 261.00
IUUC-Uma-129547 Ustilago maydis 33.43 1.00e-45 176.00
IUUC-Vda-129689 Verticillium dahliae 28.38 4.00e-31 128.00
IUUC-Vvi-131345 Vitis vinifera 73.94 2.00e-137 481.00
IUUC-Xtr-132136 Xenopus tropicalis 48.68 3.00e-80 291.00
IUUC-Xma-133767 Xiphophorus maculatus 49.50 3.00e-82 298.00
IUUC-Yli-134522 Yarrowia lipolytica 26.40 2.00e-26 113.00
Created Date 25-Jun-2017

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