iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091067

UUCD1 version

UUC-PaT-00589

Ensembl Protein ID

ENSPTRP00000029131.1

UniProt Accession

H2QR46; H2QR46_PANTR

Genbank Protein ID

JAA13384.1; JAA24757.1; JAA40726.1

Protein Name

WD repeat domain 41

Genbank Nucleotide ID

AACZ03040974; GABD01008343; GABE01004013

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000017011.1	ENSPTRT00000031538.1	ENSPTRP00000029131.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-21	73.4	322	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.fsdtllvsGsdDgtikvWDlrtg 33
           H + v  +a ++++ l+s+s Dg++++W+lr+ 
   Q: 322  HDSNVLHIArLPNRQLISCSEDGSVRIWELREK 354
           777777776457799**************9875 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV QLDDYRFASA 60
GDDGIVVVWN AQTGEKLLEL NGHTQKITAI ITFPSLESCE EKNQLILTAS ADRTVIVWDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCGGAGCA GCGCGCGCCC CGCAATCGCC GCAGCCGCCC CCGCCTTCGG CCGCCGCTCC 60
CCAAGAGACT GCCCAAACTA AGCCTCCGTG GCTGGGTACG GGAGCGCTTT GGGGACAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	92.19	0.00e+00	879.00
IUUC-Apl-004087	Anas platyrhynchos	76.65	0.00e+00	647.00
IUUC-Aca-005359	Anolis carolinensis	72.49	0.00e+00	691.00
IUUC-Ame-010669	Astyanax mexicanus	43.50	2.00e-79	289.00
IUUC-Bta-013534	Bos taurus	89.76	0.00e+00	860.00
IUUC-Cja-019219	Callithrix jacchus	96.08	0.00e+00	885.00
IUUC-Cfa-020310	Canis familiaris	92.55	0.00e+00	853.00
IUUC-Cpo-021664	Cavia porcellus	91.05	0.00e+00	872.00
IUUC-Csa-024228	Chlorocebus sabaeus	97.82	0.00e+00	928.00
IUUC-Cho-024898	Choloepus hoffmanni	88.79	8.00e-117	413.00
IUUC-Dre-028538	Danio rerio	55.58	4.00e-131	461.00
IUUC-Dno-028861	Dasypus novemcinctus	90.67	0.00e+00	865.00
IUUC-Dor-030111	Dipodomys ordii	90.41	0.00e+00	871.00
IUUC-Ete-032444	Echinops telfairi	91.28	5.00e-169	587.00
IUUC-Eca-033676	Equus caballus	90.85	0.00e+00	862.00
IUUC-Eeu-034571	Erinaceus europaeus	81.26	0.00e+00	766.00
IUUC-Fca-035387	Felis catus	93.06	0.00e+00	882.00
IUUC-Fal-037310	Ficedula albicollis	75.45	0.00e+00	689.00
IUUC-Gmo-039224	Gadus morhua	54.84	2.00e-132	465.00
IUUC-Gga-040957	Gallus gallus	77.10	0.00e+00	705.00
IUUC-Gac-042385	Gasterosteus aculeatus	55.92	2.00e-143	502.00
IUUC-Ggo-044973	Gorilla gorilla	99.13	0.00e+00	937.00
IUUC-Hsa-046842	Homo sapiens	99.35	0.00e+00	942.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	94.41	0.00e+00	637.00
IUUC-Lch-049625	Latimeria chalumnae	64.40	3.00e-175	607.00
IUUC-Loc-052368	Lepisosteus oculatus	59.65	7.00e-157	546.00
IUUC-Laf-053678	Loxodonta africana	91.47	0.00e+00	867.00
IUUC-Mcc-055184	Macaca mulatta	97.53	0.00e+00	894.00
IUUC-Meu-056165	Macropus eugenii	78.46	0.00e+00	714.00
IUUC-Mga-060184	Meleagris gallopavo	74.68	3.00e-64	236.00
IUUC-Mmr-060965	Microcebus murinus	94.99	0.00e+00	899.00
IUUC-Mdo-062702	Monodelphis domestica	86.68	0.00e+00	836.00
IUUC-Mmu-063649	Mus musculus	82.08	8.00e-119	420.00
IUUC-Mpu-065747	Mustela putorius furo	91.07	0.00e+00	871.00
IUUC-Mlu-067873	Myotis lucifugus	92.61	0.00e+00	875.00
IUUC-Nle-069670	Nomascus leucogenys	98.26	0.00e+00	928.00
IUUC-Opr-070266	Ochotona princeps	81.32	0.00e+00	769.00
IUUC-Ont-071242	Oreochromis niloticus	55.27	1.00e-141	496.00
IUUC-Oan-072879	Ornithorhynchus anatinus	85.78	0.00e+00	795.00
IUUC-Ocu-074872	Oryctolagus cuniculus	68.06	1.00e-166	579.00
IUUC-Ola-087211	Oryzias latipes	49.23	4.00e-115	407.00
IUUC-Oga-088852	Otolemur garnettii	92.81	0.00e+00	892.00
IUUC-Oar-089812	Ovis aries	89.76	0.00e+00	856.00
IUUC-Pan-091778	Papio anubis	97.61	0.00e+00	922.00
IUUC-Psi-093932	Pelodiscus sinensis	77.63	0.00e+00	713.00
IUUC-Pfo-096845	Poecilia formosa	55.65	3.00e-138	484.00
IUUC-Pab-097892	Pongo abelii	96.63	0.00e+00	819.00
IUUC-Pca-100567	Procavia capensis	68.63	6.00e-176	610.00
IUUC-Pva-102560	Pteropus vampyrus	90.41	0.00e+00	853.00
IUUC-Rno-105662	Rattus norvegicus	86.40	0.00e+00	826.00
IUUC-Sha-107058	Sarcophilus harrisii	85.24	0.00e+00	812.00
IUUC-Sar-113643	Sorex araneus	79.86	0.00e+00	705.00
IUUC-Ssc-115791	Sus scrofa	91.94	0.00e+00	876.00
IUUC-Tgu-117145	Taeniopygia guttata	76.91	0.00e+00	700.00
IUUC-Tru-117875	Takifugu rubripes	56.58	3.00e-145	508.00
IUUC-Tsy-119030	Tarsius syrichta	94.23	0.00e+00	717.00
IUUC-Tni-119761	Tetraodon nigroviridis	54.92	6.00e-139	487.00
IUUC-Tbe-127757	Tupaia belangeri	91.79	0.00e+00	768.00
IUUC-Ttr-128762	Tursiops truncatus	94.34	0.00e+00	897.00
IUUC-Vpa-130360	Vicugna pacos	93.68	0.00e+00	892.00
IUUC-Xtr-131954	Xenopus tropicalis	64.47	9.00e-170	589.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence