iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115753

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU929806

Gene Name

WDR17

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000015766.2	ENSSSCT00000017167.2	ENSSSCP00000016706.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-45	150.6	320	359
UBD/Beta-Prp	1.60e-51	175.5	229	396

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l + ++   llvsGs+D tikvWD+r+g +l 
   Q: 320  GHTAPVRGLMWnTEipYLLVSGSWDYTIKVWDTREGACLD 359
           8**********85573668*****************9986 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgk.ilvtgseDrtikvw..dlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcle 130
           ++ ++h a+v  +++s++ k +++tg eD++++v+    s+ +++ +++gh+++v  +++sp     l sGs+d  +r+wd  ++ c++
   Q: 229  HK-YKHPAAVFGCDWSQNNKdMIATGCEDKNVRVYymATSSDQPLKVFSGHTEKVFHVRWSPlREGILCSGSDDGSVRIWDYTQDACIN 316
           33.67888999999987776699999999999999888888899999999999999999999555999999999999999999999999 PP
   S: 131  etlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlq 210
            +lsgh++ v+++ ++ +   llvsGs D t+++Wd + g +l+t    h  +vy l+ ++++ + ++s+s+d+tv+lw+l 
   Q: 317  -ILSGHTAPVRGLMWNTEIpYLLVSGSWDYTIKVWDTREGACLDTVYD-HGADVYGLTCHPSRpFTMASCSRDSTVRLWSLT 396
           .99999999999999999999999999999999999999999999976.999999999998888889999999999999874 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

DSQVGVLRIW NVSRTTPVDN IKLKKTGFHC LHVLNSPPRK KFSIQSPTKN HYTSSTSEAV 60
PPPTLTQNQA FSLPPGHAVC CFLDGGVGLY DMGAKKWDFL RDLGHVETIF DCKFKPDDPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTCTCAAG TGGGTGTTTT GCGCATCTGG AATGTTTCAA GAACAACACC TGTTGATAAT 60
ATTAAATTAA AGAAAACGGG ATTTCACTGC TTACATGTAC TTAATTCTCC TCCAAGGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001190	Ailuropoda melanoleuca	91.61	0.00e+00	1985.00
IUUC-Apl-003326	Anas platyrhynchos	83.24	0.00e+00	1805.00
IUUC-Aca-004349	Anolis carolinensis	83.40	0.00e+00	1800.00
IUUC-Ame-011366	Astyanax mexicanus	54.85	0.00e+00	1064.00
IUUC-Bta-013275	Bos taurus	92.77	0.00e+00	2002.00
IUUC-Cja-018970	Callithrix jacchus	89.95	0.00e+00	1959.00
IUUC-Cfa-021237	Canis familiaris	90.85	0.00e+00	1969.00
IUUC-Cpo-021342	Cavia porcellus	84.76	0.00e+00	1655.00
IUUC-Cre-022569	Chlamydomonas reinhardtii	34.00	1.00e-71	265.00
IUUC-Csa-023687	Chlorocebus sabaeus	90.14	0.00e+00	1961.00
IUUC-Cho-024772	Choloepus hoffmanni	80.65	0.00e+00	808.00
IUUC-Csv-026021	Ciona savignyi	40.02	0.00e+00	806.00
IUUC-Dre-028031	Danio rerio	78.23	0.00e+00	1691.00
IUUC-Dno-029369	Dasypus novemcinctus	91.16	0.00e+00	1974.00
IUUC-Dor-030645	Dipodomys ordii	87.44	0.00e+00	1883.00
IUUC-Ete-032530	Echinops telfairi	84.15	0.00e+00	1795.00
IUUC-Eca-034405	Equus caballus	91.32	0.00e+00	1978.00
IUUC-Eeu-035006	Erinaceus europaeus	82.77	0.00e+00	945.00
IUUC-Fca-035965	Felis catus	90.66	0.00e+00	1960.00
IUUC-Fal-037136	Ficedula albicollis	81.98	0.00e+00	1750.00
IUUC-Gmo-039293	Gadus morhua	75.02	0.00e+00	1588.00
IUUC-Gga-040931	Gallus gallus	80.79	0.00e+00	1735.00
IUUC-Gac-042493	Gasterosteus aculeatus	73.68	0.00e+00	1558.00
IUUC-Ggo-045540	Gorilla gorilla	89.89	0.00e+00	1962.00
IUUC-Hsa-046708	Homo sapiens	90.72	0.00e+00	1986.00
IUUC-Lch-050135	Latimeria chalumnae	86.37	0.00e+00	1353.00
IUUC-Loc-051730	Lepisosteus oculatus	82.72	0.00e+00	1787.00
IUUC-Laf-053743	Loxodonta africana	91.61	0.00e+00	1961.00
IUUC-Mcc-055590	Macaca mulatta	90.34	0.00e+00	1965.00
IUUC-Meu-056328	Macropus eugenii	68.37	0.00e+00	1360.00
IUUC-Mga-059877	Meleagris gallopavo	80.64	0.00e+00	1740.00
IUUC-Mmr-060756	Microcebus murinus	91.30	0.00e+00	1982.00
IUUC-Mdo-062749	Monodelphis domestica	84.35	0.00e+00	1835.00
IUUC-Mmu-063668	Mus musculus	88.02	0.00e+00	1934.00
IUUC-Mpu-066856	Mustela putorius furo	90.72	0.00e+00	1936.00
IUUC-Mlu-067186	Myotis lucifugus	84.54	0.00e+00	1842.00
IUUC-Nle-070018	Nomascus leucogenys	90.34	0.00e+00	1983.00
IUUC-Ont-071482	Oreochromis niloticus	67.24	0.00e+00	1411.00
IUUC-Oan-073065	Ornithorhynchus anatinus	85.07	0.00e+00	1306.00
IUUC-Ocu-073786	Oryctolagus cuniculus	90.16	0.00e+00	1947.00
IUUC-Oga-088545	Otolemur garnettii	84.66	0.00e+00	1808.00
IUUC-Oar-090205	Ovis aries	92.27	0.00e+00	1979.00
IUUC-Ptr-091092	Pan troglodytes	90.53	0.00e+00	1987.00
IUUC-Pan-092430	Papio anubis	90.34	0.00e+00	1963.00
IUUC-Psi-093774	Pelodiscus sinensis	84.39	0.00e+00	1816.00
IUUC-Pfo-097414	Poecilia formosa	73.54	0.00e+00	1517.00
IUUC-Pab-097853	Pongo abelii	90.63	0.00e+00	1989.00
IUUC-Pca-100440	Procavia capensis	71.62	0.00e+00	1020.00
IUUC-Pva-102838	Pteropus vampyrus	89.47	0.00e+00	1930.00
IUUC-Rno-104951	Rattus norvegicus	86.47	0.00e+00	1897.00
IUUC-Sha-107508	Sarcophilus harrisii	82.96	0.00e+00	1827.00
IUUC-Sar-113549	Sorex araneus	92.73	0.00e+00	1149.00
IUUC-Tgu-117315	Taeniopygia guttata	81.56	0.00e+00	1775.00
IUUC-Tru-118153	Takifugu rubripes	73.22	0.00e+00	1534.00
IUUC-Tsy-119384	Tarsius syrichta	83.91	0.00e+00	1818.00
IUUC-Tbe-127579	Tupaia belangeri	79.40	0.00e+00	1067.00
IUUC-Ttr-128488	Tursiops truncatus	83.86	0.00e+00	1793.00
IUUC-Vpa-130274	Vicugna pacos	89.34	0.00e+00	1021.00
IUUC-Xtr-132199	Xenopus tropicalis	83.17	0.00e+00	1820.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence