iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017246

Ensembl Protein ID

Bra016165.1-P

UniProt Accession

M4DI38; M4DI38_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016165	Bra016165.1	Bra016165.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-31	109.5	245	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+flCpIslelM+dPv++++G+ty+rs+I++w++ g+  cP+t+q+l +  l+Pn++lr+li++wc ++++
   Q: 245  IPEDFLCPISLELMKDPVIVSTGQTYERSYIQRWIDCGNLRCPKTQQKLGNFALTPNYVLRSLISQWCTKHNI 317
           8********************************************************************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAGVAVSPAS LLDVIAEIAE ISANTGVFKK DCADLARRVC LLTHLVEEIR DSPQTPTAEE 60
SDASSSCECD WWSDLVVGLQ AAKRLLSAAT CFQARESSEG AAKRISFQFQ CVTWKLEKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGAG TAGCCGTCTC TCCCGCTTCT CTGCTCGACG TCATCGCTGA GATCGCAGAG 60
ATTTCGGCGA ACACGGGGGT GTTTAAGAAG GACTGCGCCG ATCTCGCGAG GAGAGTTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0051865--P:protein autoubiquitination
GO:0031648--P:protein destabilization
GO:2000022--P:regulation of jasmonic acid mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005733	Arabidopsis lyrata	81.07	0.00e+00	937.00
IUUC-Ath-007555	Arabidopsis thaliana	81.01	0.00e+00	945.00
IUUC-Bol-015190	Brassica oleracea	96.28	0.00e+00	1150.00
IUUC-Itr-048039	Ictidomys tridecemlineatus	27.73	2.00e-11	65.10
IUUC-Ssc-116061	Sus scrofa	29.39	2.00e-14	75.10
IUUC-Tbe-127244	Tupaia belangeri	32.78	2.00e-10	61.20
IUUC-Ttr-128612	Tursiops truncatus	28.31	3.00e-14	74.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence