iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099909

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTR_0009s06730g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s06730	POPTR_0009s06730.1	POPTR_0009s06730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-07	31.3	207	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cl++         +    l+  C+H f+ +C+ +w        +++ s    CP+Cr
   Q: 207  CSVCLDRVlskltaaeR-KfGLLSECNHPFCISCIRNWrgsspTSGMDVNSSLRACPICR 265
           99**9999888877742.2234577*************99998777777788888****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSKRLLCKFF AHGACLKGEH CEFSHDWKDP PNNICTFYQK GICVYGSRCR YDHVKPSRPE 60
STASSSLTVL ASTSVSLALP ARTVSSGVRT VLAVPPELSA SSRPFIAPST PAWDLESVQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCGGAAGA TAGGTAGAGT GAATGGAAGA GAGAGAGACA CCTTTCGTCT TAAAATTTGG 60
CAAACTCGCT CGCGTGATTG ACACCCTTCT ATTTCGCTTC CTTTCCTTTC CCCTCCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13639--zf-RING_2

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0009s06730g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000297	Aegilops tauschii	48.16	6.00e-68	251.00
IUUC-Aml-001937	Ailuropoda melanoleuca	34.84	2.00e-53	202.00
IUUC-Atr-003024	Amborella trichopoda	67.04	1.00e-138	485.00
IUUC-Apl-004110	Anas platyrhynchos	44.27	4.00e-41	161.00
IUUC-Aca-005385	Anolis carolinensis	35.20	7.00e-58	217.00
IUUC-Aly-006128	Arabidopsis lyrata	66.94	2.00e-137	481.00
IUUC-Ath-006918	Arabidopsis thaliana	62.40	3.00e-121	427.00
IUUC-Ame-011246	Astyanax mexicanus	35.74	6.00e-57	214.00
IUUC-Bta-012318	Bos taurus	34.17	1.00e-55	210.00
IUUC-Bdi-015008	Brachypodium distachyon	52.65	5.00e-95	340.00
IUUC-Bol-016162	Brassica oleracea	72.32	2.00e-89	321.00
IUUC-Bra-018102	Brassica rapa	59.05	3.00e-107	380.00
IUUC-Cel-018642	Caenorhabditis elegans	28.99	8.00e-41	160.00
IUUC-Cja-019550	Callithrix jacchus	42.79	7.00e-42	164.00
IUUC-Cfa-020166	Canis familiaris	35.31	1.00e-55	209.00
IUUC-Cpo-021887	Cavia porcellus	36.24	2.00e-57	216.00
IUUC-Cre-022707	Chlamydomonas reinhardtii	44.64	2.00e-54	205.00
IUUC-Csa-023930	Chlorocebus sabaeus	34.38	8.00e-55	207.00
IUUC-Cho-024307	Choloepus hoffmanni	33.70	2.00e-56	212.00
IUUC-Cin-025619	Ciona intestinalis	34.97	4.00e-59	221.00
IUUC-Csv-026322	Ciona savignyi	31.81	4.00e-53	201.00
IUUC-Dre-027762	Danio rerio	36.76	3.00e-62	231.00
IUUC-Dno-029666	Dasypus novemcinctus	35.00	1.00e-59	223.00
IUUC-Dor-030133	Dipodomys ordii	43.71	1.00e-27	116.00
IUUC-Dme-031705	Drosophila melanogaster	30.58	1.00e-38	153.00
IUUC-Ete-032356	Echinops telfairi	31.68	6.00e-35	140.00
IUUC-Eca-033340	Equus caballus	35.03	8.00e-57	213.00
IUUC-Eeu-035167	Erinaceus europaeus	42.29	3.00e-41	162.00
IUUC-Fca-035536	Felis catus	34.93	3.00e-56	211.00
IUUC-Fal-036881	Ficedula albicollis	34.49	2.00e-54	205.00
IUUC-Gmo-039495	Gadus morhua	40.00	1.00e-46	180.00
IUUC-Ggr-039835	Gaeumannomyces graminis	36.99	3.00e-09	56.20
IUUC-Gga-041148	Gallus gallus	34.77	4.00e-55	208.00
IUUC-Gac-041790	Gasterosteus aculeatus	37.32	2.00e-62	232.00
IUUC-Ggo-045245	Gorilla gorilla	33.98	9.00e-56	210.00
IUUC-Hsa-046589	Homo sapiens	33.98	1.00e-55	210.00
IUUC-Hvu-047044	Hordeum vulgare	50.74	4.00e-82	297.00
IUUC-Itr-048468	Ictidomys tridecemlineatus	42.38	2.00e-27	115.00
IUUC-Lch-049777	Latimeria chalumnae	36.67	3.00e-59	222.00
IUUC-Loc-052281	Lepisosteus oculatus	37.54	6.00e-62	230.00
IUUC-Laf-054551	Loxodonta africana	35.38	3.00e-55	208.00
IUUC-Mcc-055160	Macaca mulatta	34.09	1.00e-53	203.00
IUUC-Meu-056809	Macropus eugenii	34.07	2.00e-56	213.00
IUUC-Mla-059005	Melampsora laricipopulina	33.02	7.00e-22	98.20
IUUC-Mga-059767	Meleagris gallopavo	34.48	5.00e-52	197.00
IUUC-Mmr-061574	Microcebus murinus	35.65	4.00e-59	221.00
IUUC-Mdo-061974	Monodelphis domestica	35.18	2.00e-58	219.00
IUUC-Mmu-063887	Mus musculus	34.33	8.00e-56	210.00
IUUC-Mac-064993	Musa acuminata	68.25	4.00e-140	489.00
IUUC-Mpu-066756	Mustela putorius furo	35.06	8.00e-53	200.00
IUUC-Mlu-067691	Myotis lucifugus	34.66	3.00e-55	208.00
IUUC-Nle-069845	Nomascus leucogenys	35.10	6.00e-56	211.00
IUUC-Opr-070262	Ochotona princeps	33.15	9.00e-55	207.00
IUUC-Ont-071561	Oreochromis niloticus	38.82	9.00e-67	246.00
IUUC-Oan-073517	Ornithorhynchus anatinus	47.27	5.00e-12	64.30
IUUC-Ocu-074869	Oryctolagus cuniculus	34.38	3.00e-42	165.00
IUUC-Ola-086506	Oryzias latipes	37.90	8.00e-64	237.00
IUUC-Olu-087870	Ostreococcus lucimarinus	47.02	4.00e-38	149.00
IUUC-Oga-088871	Otolemur garnettii	35.93	9.00e-61	227.00
IUUC-Oar-090436	Ovis aries	34.26	2.00e-55	209.00
IUUC-Ptr-091519	Pan troglodytes	34.26	5.00e-56	211.00
IUUC-Pan-092582	Papio anubis	34.44	1.00e-56	213.00
IUUC-Psi-093168	Pelodiscus sinensis	34.88	4.00e-54	204.00
IUUC-Pfo-096075	Poecilia formosa	37.68	2.00e-63	235.00
IUUC-Pab-098764	Pongo abelii	34.67	1.00e-54	206.00
IUUC-Pca-100903	Procavia capensis	36.03	8.00e-62	230.00
IUUC-Ppe-101248	Prunus persica	70.78	9.00e-120	422.00
IUUC-Pva-103124	Pteropus vampyrus	30.87	3.00e-44	172.00
IUUC-Rno-104976	Rattus norvegicus	34.33	2.00e-56	213.00
IUUC-Sha-107572	Sarcophilus harrisii	35.29	1.00e-55	209.00
IUUC-Smo-109483	Selaginella moellendorffii	54.05	2.00e-103	368.00
IUUC-Sit-110077	Setaria italica	55.49	5.00e-116	410.00
IUUC-Sar-113068	Sorex araneus	34.96	5.00e-53	201.00
IUUC-Sbi-114884	Sorghum bicolor	53.70	2.00e-113	401.00
IUUC-Ssc-115272	Sus scrofa	34.82	2.00e-55	209.00
IUUC-Tgu-116537	Taeniopygia guttata	33.33	1.00e-53	203.00
IUUC-Tru-118205	Takifugu rubripes	34.76	3.00e-63	235.00
IUUC-Tsy-118929	Tarsius syrichta	42.29	6.00e-41	160.00
IUUC-Tni-120744	Tetraodon nigroviridis	36.58	2.00e-61	228.00
IUUC-Tca-121675	Theobroma cacao	71.43	2.00e-132	464.00
IUUC-Tur-126806	Triticum urartu	51.69	3.00e-76	278.00
IUUC-Tme-127048	Tuber melanosporum	26.17	4.00e-19	88.60
IUUC-Tbe-128131	Tupaia belangeri	31.21	1.00e-42	166.00
IUUC-Ttr-129099	Tursiops truncatus	34.54	1.00e-57	216.00
IUUC-Xtr-132036	Xenopus tropicalis	43.28	4.00e-41	161.00
IUUC-Xma-134162	Xiphophorus maculatus	37.61	2.00e-63	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence