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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-104912
UUCD1 version UUC-RaN-01094
Ensembl Protein ID ENSRNOP00000023213.6
UniProt Accession F1M413; F1M413_RAT
Genbank Protein ID ENSRNOP00000023213
Protein Name Ubiquitin carboxyl-terminal hydrolase DUB-1-like
Genbank Nucleotide ID AC130613
Gene Name LOC100910107; Usp17l5; RGD1565607
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000043303.2 ENSRNOT00000023213.6 ENSRNOP00000023213.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 6.60e-78 262.6 51 346
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgy 87
    Gl+N+gN+CY+N+vLQcL+++p+l++++l+ ++++++ p+g+ +++++ +++ + +++ ++++p+e+l++ f++
   Q: 51 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSqEHSQRC-----CYPEGCNMCAMEAHVTQSLlhSHSGGVMKPSEILTST------FHKH 128
    9*****************************4444444.....35778888888777777665788889******98765......8899 PP
   S: 88 eqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpv 176
    +q+Da+Efl+f l++++e++ l +++++++k +sli d+F+gq++sqikc +c+ + +++pfl l l++
   Q: 129 RQEDAHEFLMFTLNTMHESC------------------LRGCKQSETTSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI 199
    9*******************..................344457899****************************************** PP
   S: 177 pgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfc 265
    + + s++++Le+ +k eel+g+n+yyc +c++k a+k++k+++ ++vL l L+R ++ k+n+ v++p+ Ldl+p++
   Q: 200 CSAQ-----SVKQALEDLVKVEELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLVLNRS-YDF---GGDKLNRVVSYPEYLDLQPYL 279
    ****.....9**************************************************9.655...678****************** PP
   S: 266 tspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    ++p+ + + Y L+av+vH G ++ssGHY++yvk ++gkW+++dDskVt ++ ++vl+ + aY+lfY +
   Q: 280 SQPTAG---PLPYALYAVLVHDGvTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLS---EPAYLLFYVQ 346
    **9988...89*************************************************...********87 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
VVLCSCPVED PAMSPPATPE LHQDEAQVLE ELSAKGKPSL SLQRLQRPGS GLQNIGNSCY 60
LNAVLQCLTH TPPLADYMLS QEHSQRCCYP EGCNMCAMEA HVTQSLLHSH SGGVMKPSEI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-104912|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCGTTTTGT GTTCTTGTCC TGTAGAAGAT CCAGCCATGT CACCACCTGC TACCCCAGAG 60
CTCCATCAGG ATGAAGCACA GGTGCTAGAG GAGCTGTCTG CCAAGGGGAA GCCCAGTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-104912|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ssc-115538 Sus scrofa 45.71 4.00e-105 375.00
Created Date 25-Jun-2017

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