iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098863

Ensembl Protein ID

POPTR_0017s08380.1

UniProt Accession

B9IJJ3; B9IJJ3_POPTR

Genbank Protein ID

EEF03922.2

Protein Name

Ubiquitin-associated domain-containing family protein

Genbank Nucleotide ID

CM000353

Gene Name

POPTRDRAFT_1104982; POPTR_0017s08380g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0017s08380	POPTR_0017s08380.1	POPTR_0017s08380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.10e-07	32.9	115	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           d+ +le+l++MGF++ +a +aL  + n  leaAv+++ ++
   Q: 115  DKKILEELEAMGFPTARATRALHYSgNAGLEAAVNWVVEH 154
           889*********************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAGLSLKCGD CGASLRSVQE AQDHAELTSH SNFSESTEAV LNLVCATCDK PCRSKTESDL 60
HTKRTGHSEF TDKTAEAAEP ISLEVPKATP MDANEPAADA STSTQPEEMV APEVDKKILE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGTTTTTG ATGAACTATA ATGGAGAAGC TGTGAAACAC TGCCTTCACT TTCCTTCTCT 60
CGCCAGCAAG CAAAGGTTAA ATTAAAAGAA AGGAAAAAAA GCGACTCAAA ATAAAAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018997--PUB_domain
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

pop:POPTR_0017s08380g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001103	Aegilops tauschii	66.49	5.00e-70	257.00
IUUC-Aml-002325	Ailuropoda melanoleuca	52.94	4.00e-12	64.70
IUUC-Atr-002907	Amborella trichopoda	76.87	5.00e-149	520.00
IUUC-Ame-011399	Astyanax mexicanus	49.21	5.00e-12	64.30
IUUC-Bta-013151	Bos taurus	52.94	5.00e-12	64.30
IUUC-Bdi-014311	Brachypodium distachyon	73.92	2.00e-140	491.00
IUUC-Cja-019084	Callithrix jacchus	52.94	6.00e-12	64.30
IUUC-Csa-024040	Chlorocebus sabaeus	59.09	5.00e-12	64.30
IUUC-Dno-029598	Dasypus novemcinctus	59.09	5.00e-12	64.30
IUUC-Dor-030917	Dipodomys ordii	46.27	1.00e-12	66.20
IUUC-Eca-034294	Equus caballus	54.90	2.00e-12	65.90
IUUC-Eeu-034906	Erinaceus europaeus	59.09	1.00e-11	63.50
IUUC-Fca-035653	Felis catus	38.04	8.00e-12	63.90
IUUC-Gac-042481	Gasterosteus aculeatus	45.71	3.00e-11	61.60
IUUC-Ggo-044821	Gorilla gorilla	52.94	6.00e-12	64.30
IUUC-Hsa-046797	Homo sapiens	59.09	6.00e-12	64.30
IUUC-Itr-048850	Ictidomys tridecemlineatus	38.04	6.00e-12	64.30
IUUC-Lch-049508	Latimeria chalumnae	59.65	5.00e-14	71.20
IUUC-Laf-053932	Loxodonta africana	40.23	4.00e-13	68.20
IUUC-Mcc-055300	Macaca mulatta	59.09	6.00e-12	64.30
IUUC-Mmr-060979	Microcebus murinus	59.09	6.00e-12	63.90
IUUC-Mmu-063212	Mus musculus	59.09	5.00e-12	64.30
IUUC-Mac-065072	Musa acuminata	70.11	2.00e-69	254.00
IUUC-Mpu-066540	Mustela putorius furo	52.94	4.00e-12	64.70
IUUC-Mlu-067589	Myotis lucifugus	59.09	5.00e-12	64.30
IUUC-Nle-069045	Nomascus leucogenys	59.09	4.00e-12	64.30
IUUC-Opr-070772	Ochotona princeps	52.94	6.00e-12	64.30
IUUC-Oan-073484	Ornithorhynchus anatinus	42.37	2.00e-09	57.00
IUUC-Ocu-074333	Oryctolagus cuniculus	52.94	3.00e-12	65.10
IUUC-Ogl-077259	Oryza glaberrima	46.03	5.00e-73	267.00
IUUC-Oni-082110	Oryza nivara	43.03	1.00e-65	242.00
IUUC-Oga-088429	Otolemur garnettii	52.94	4.00e-12	64.70
IUUC-Oar-089885	Ovis aries	52.94	5.00e-12	64.30
IUUC-Ptr-091315	Pan troglodytes	52.94	6.00e-12	64.30
IUUC-Pan-092885	Papio anubis	59.09	5.00e-12	64.30
IUUC-Pab-097881	Pongo abelii	59.09	6.00e-12	64.30
IUUC-Pca-100977	Procavia capensis	48.39	2.00e-12	66.20
IUUC-Pva-102169	Pteropus vampyrus	52.94	6.00e-12	64.30
IUUC-Rno-105459	Rattus norvegicus	59.09	5.00e-12	64.30
IUUC-Smo-109480	Selaginella moellendorffii	64.07	1.00e-116	412.00
IUUC-Ssc-116114	Sus scrofa	52.94	4.00e-12	64.70
IUUC-Tru-117839	Takifugu rubripes	45.21	8.00e-11	60.50
IUUC-Tsy-118813	Tarsius syrichta	52.94	7.00e-12	63.90
IUUC-Tni-120504	Tetraodon nigroviridis	48.28	3.00e-11	61.60
IUUC-Tae-124974	Triticum aestivum	68.95	3.00e-72	265.00
IUUC-Tur-126615	Triticum urartu	68.95	3.00e-72	265.00
IUUC-Tbe-128034	Tupaia belangeri	52.94	7.00e-12	63.90
IUUC-Ttr-128468	Tursiops truncatus	52.94	7.00e-12	63.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence