iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ df   d+ ++lpC H++h+dC+  w       +++f+CP C
   Q: 98   CVICMMDFvyGDPIRFLPCMHIYHLDCIDDW------LMRSFTCPSC 138
           ********99888******************......********** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGNCLKSPTS DDISLLHESQ SDRRLGEGTE PDQEPPPPYQ EQVPVPVYHP TPSQTRLATQ 60
LTEEEQIRIA QRIGLIQHLP KGVYDPGRDG SEKKIRECVI CMMDFVYGDP IRFLPCMHIY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTCAGGTT CCAGACACGA CCCCGGCGCA GCCCGCGGCC TAGCCTCGCG CCCCCTGCCC 60
CGGGGGCTGG CATGAGCGGC CCCTCGGTGG CGCCGGCGCG GGGGAGCCGC CGCCTGAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0000151--C:ubiquitin ligase complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001762	Ailuropoda melanoleuca	97.40	1.00e-73	268.00
IUUC-Apl-003879	Anas platyrhynchos	100.00	1.00e-64	237.00
IUUC-Aca-004887	Anolis carolinensis	97.40	2.00e-70	257.00
IUUC-Ame-011194	Astyanax mexicanus	90.91	2.00e-73	267.00
IUUC-Bta-013543	Bos taurus	100.00	5.00e-66	242.00
IUUC-Bol-016328	Brassica oleracea	44.78	2.00e-12	65.50
IUUC-Cel-018152	Caenorhabditis elegans	36.36	2.00e-22	98.20
IUUC-Cja-019172	Callithrix jacchus	98.05	3.00e-71	259.00
IUUC-Cfa-020423	Canis familiaris	100.00	5.00e-64	235.00
IUUC-Cpo-021457	Cavia porcellus	98.05	3.00e-71	259.00
IUUC-Csa-024165	Chlorocebus sabaeus	98.05	3.00e-71	259.00
IUUC-Cho-024439	Choloepus hoffmanni	90.28	6.00e-71	259.00
IUUC-Cin-025246	Ciona intestinalis	79.66	4.00e-25	105.00
IUUC-Csv-026239	Ciona savignyi	61.76	4.00e-35	140.00
IUUC-Dre-027392	Danio rerio	91.56	6.00e-73	265.00
IUUC-Dno-029468	Dasypus novemcinctus	100.00	1.00e-64	237.00
IUUC-Dor-030265	Dipodomys ordii	98.05	3.00e-71	259.00
IUUC-Dme-032121	Drosophila melanogaster	53.59	2.00e-41	160.00
IUUC-Ete-032526	Echinops telfairi	98.05	3.00e-71	259.00
IUUC-Eca-033516	Equus caballus	91.28	2.00e-62	230.00
IUUC-Eeu-035261	Erinaceus europaeus	100.00	1.00e-64	237.00
IUUC-Fca-036029	Felis catus	98.05	3.00e-71	259.00
IUUC-Fal-036620	Ficedula albicollis	99.13	1.00e-65	241.00
IUUC-Gmo-038539	Gadus morhua	91.56	7.00e-73	265.00
IUUC-Gga-040240	Gallus gallus	96.75	5.00e-70	256.00
IUUC-Gac-041863	Gasterosteus aculeatus	91.56	2.00e-72	264.00
IUUC-Ggo-045517	Gorilla gorilla	98.05	3.00e-71	259.00
IUUC-Hsa-046313	Homo sapiens	98.05	3.00e-71	259.00
IUUC-Itr-048979	Ictidomys tridecemlineatus	97.40	1.00e-70	258.00
IUUC-Lch-050201	Latimeria chalumnae	90.83	3.00e-63	233.00
IUUC-Loc-052731	Lepisosteus oculatus	89.17	1.00e-69	254.00
IUUC-Laf-053374	Loxodonta africana	100.00	3.00e-65	239.00
IUUC-Mcc-055336	Macaca mulatta	98.05	3.00e-71	259.00
IUUC-Meu-055960	Macropus eugenii	99.12	2.00e-64	236.00
IUUC-Mla-059167	Melampsora laricipopulina	45.61	2.00e-09	58.20
IUUC-Mga-059363	Meleagris gallopavo	100.00	1.00e-64	237.00
IUUC-Mmr-061456	Microcebus murinus	97.40	1.00e-73	268.00
IUUC-Mdo-062780	Monodelphis domestica	96.30	5.00e-58	216.00
IUUC-Mmu-064330	Mus musculus	97.40	5.00e-74	269.00
IUUC-Mpu-065844	Mustela putorius furo	98.05	3.00e-71	259.00
IUUC-Mlu-067557	Myotis lucifugus	98.05	3.00e-71	259.00
IUUC-Nle-069160	Nomascus leucogenys	100.00	1.00e-64	237.00
IUUC-Opr-070708	Ochotona princeps	93.51	2.00e-68	250.00
IUUC-Ont-071784	Oreochromis niloticus	91.61	1.00e-72	265.00
IUUC-Oan-073071	Ornithorhynchus anatinus	91.47	6.00e-66	241.00
IUUC-Ocu-074236	Oryctolagus cuniculus	98.05	3.00e-71	259.00
IUUC-Ola-086848	Oryzias latipes	90.91	1.00e-80	291.00
IUUC-Oga-088630	Otolemur garnettii	68.83	1.00e-55	208.00
IUUC-Oar-089615	Ovis aries	98.05	3.00e-71	259.00
IUUC-Ptr-091459	Pan troglodytes	98.05	3.00e-71	259.00
IUUC-Pan-092848	Papio anubis	98.05	3.00e-71	259.00
IUUC-Psi-092968	Pelodiscus sinensis	97.40	2.00e-70	257.00
IUUC-Pfo-096923	Poecilia formosa	92.21	9.00e-82	295.00
IUUC-Pab-098483	Pongo abelii	98.05	3.00e-71	259.00
IUUC-Pca-100978	Procavia capensis	61.04	3.00e-38	150.00
IUUC-Pva-102550	Pteropus vampyrus	98.05	3.00e-71	259.00
IUUC-Ptt-103856	Puccinia triticina	45.10	2.00e-04	37.70
IUUC-Sha-106723	Sarcophilus harrisii	99.12	5.00e-65	238.00
IUUC-Stu-112368	Solanum tuberosum	45.59	3.00e-13	68.20
IUUC-Sar-113209	Sorex araneus	98.05	3.00e-71	259.00
IUUC-Ssc-115813	Sus scrofa	98.05	3.00e-71	259.00
IUUC-Tgu-117220	Taeniopygia guttata	100.00	3.00e-65	239.00
IUUC-Tru-118754	Takifugu rubripes	92.21	5.00e-74	269.00
IUUC-Tsy-118863	Tarsius syrichta	100.00	1.00e-64	237.00
IUUC-Tni-119702	Tetraodon nigroviridis	91.56	1.00e-73	268.00
IUUC-Tbe-127266	Tupaia belangeri	96.91	1.00e-34	137.00
IUUC-Ttr-128337	Tursiops truncatus	98.05	3.00e-71	259.00
IUUC-Vpa-130786	Vicugna pacos	100.00	1.00e-64	237.00
IUUC-Xtr-132840	Xenopus tropicalis	94.16	6.00e-73	265.00
IUUC-Xma-134249	Xiphophorus maculatus	91.56	1.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence