iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019264

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01046960

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000001085.2	ENSCJAT00000001994.1	ENSCJAP00000001881.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	4.60e-51	174.1	41	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl++l++e+++ ll+C h+ C++Cl++yl+l+i+e++ + iscp  ec+e+l++++i+ ll+++ l+++ye+++l++++++d++++w
   Q: 41   CPLCLMRLPPEQAPRLLSCPHRSCRDCLRHYLRLEISESR-VPISCP--ECSERLNPHDIRLLLADPPLMHKYEEFMLRRYLASDPDCRW 127
           ****************************************.9*****..89*************************************** PP
   S: 91   cpapdCslvvll.ekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyi 171
           cpapdC   +++   +a  +kl++e+e+c++efC++Ck++wH++++C+++++++a++ + +       ++ +++  ++++k+Cp+C++yi
   Q: 128  CPAPDCGCYAVIaYGCAscPKLTCEREGCQTEFCYHCKQIWHPNQTCDMARQQRAQSLRVRtkhtsgLSYGQESGPADDIKPCPRCSAYI 217
           ******97655505555889***********************************999888888888888899999************** PP
   S: 172  ek..negCnhmtCakCkaefCwlC 193
           +k  +++CnhmtCa C++efCwlC
   Q: 218  IKmnDGSCNHMTCAVCGCEFCWLC 241
           *997889***************** PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

KTLPAEPAAE AETEAAAAAE PEFDDEEAAE GGGSGSEEVE CPLCLMRLPP EQAPRLLSCP 60
HRSCRDCLRH YLRLEISESR VPISCPECSE RLNPHDIRLL LADPPLMHKY EEFMLRRYLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGACACTGC CTGCCGAGCC GGCCGCCGAG GCCGAGACGG AGGCCGCGGC GGCGGCGGAG 60
CCCGAGTTCG ACGATGAGGA GGCGGCGGAG GGCGGCGGCT CGGGCTCGGA GGAGGTCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4

SMART

SM00647--IBR
SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	85.46	0.00e+00	928.00
IUUC-Apl-003468	Anas platyrhynchos	80.38	0.00e+00	737.00
IUUC-Aca-004324	Anolis carolinensis	78.86	0.00e+00	847.00
IUUC-Ame-011813	Astyanax mexicanus	71.40	3.00e-180	625.00
IUUC-Bta-013135	Bos taurus	86.47	0.00e+00	967.00
IUUC-Cpo-022502	Cavia porcellus	85.61	0.00e+00	831.00
IUUC-Cho-025032	Choloepus hoffmanni	69.56	0.00e+00	649.00
IUUC-Dre-028769	Danio rerio	64.47	0.00e+00	681.00
IUUC-Dor-030551	Dipodomys ordii	96.00	1.00e-116	413.00
IUUC-Ete-033008	Echinops telfairi	71.26	0.00e+00	661.00
IUUC-Eca-033267	Equus caballus	85.66	0.00e+00	787.00
IUUC-Fca-035520	Felis catus	85.28	0.00e+00	782.00
IUUC-Gac-041619	Gasterosteus aculeatus	65.37	0.00e+00	660.00
IUUC-Hsa-045958	Homo sapiens	87.86	0.00e+00	987.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	85.19	0.00e+00	823.00
IUUC-Lch-049552	Latimeria chalumnae	78.16	0.00e+00	818.00
IUUC-Loc-051738	Lepisosteus oculatus	64.44	0.00e+00	702.00
IUUC-Laf-054252	Loxodonta africana	81.42	0.00e+00	791.00
IUUC-Meu-055920	Macropus eugenii	82.88	0.00e+00	806.00
IUUC-Mga-059587	Meleagris gallopavo	77.07	0.00e+00	681.00
IUUC-Mdo-061985	Monodelphis domestica	83.68	0.00e+00	943.00
IUUC-Mmu-064262	Mus musculus	85.88	0.00e+00	956.00
IUUC-Mpu-066101	Mustela putorius furo	87.17	0.00e+00	980.00
IUUC-Mlu-067347	Myotis lucifugus	84.84	0.00e+00	790.00
IUUC-Ont-071298	Oreochromis niloticus	63.56	0.00e+00	679.00
IUUC-Oan-073219	Ornithorhynchus anatinus	78.93	0.00e+00	736.00
IUUC-Ocu-073792	Oryctolagus cuniculus	83.59	0.00e+00	751.00
IUUC-Ola-086499	Oryzias latipes	64.82	0.00e+00	691.00
IUUC-Oga-088812	Otolemur garnettii	87.16	0.00e+00	929.00
IUUC-Oar-090353	Ovis aries	84.49	0.00e+00	841.00
IUUC-Psi-092988	Pelodiscus sinensis	79.43	0.00e+00	725.00
IUUC-Pfo-096268	Poecilia formosa	63.02	0.00e+00	681.00
IUUC-Pca-100597	Procavia capensis	85.60	0.00e+00	782.00
IUUC-Pva-102542	Pteropus vampyrus	72.91	0.00e+00	729.00
IUUC-Sha-106512	Sarcophilus harrisii	83.44	0.00e+00	914.00
IUUC-Sar-113233	Sorex araneus	84.70	0.00e+00	751.00
IUUC-Ssc-115781	Sus scrofa	86.20	0.00e+00	1016.00
IUUC-Tgu-117384	Taeniopygia guttata	94.42	0.00e+00	702.00
IUUC-Tru-117919	Takifugu rubripes	64.82	0.00e+00	675.00
IUUC-Tsy-119275	Tarsius syrichta	81.09	0.00e+00	771.00
IUUC-Tbe-127335	Tupaia belangeri	99.46	0.00e+00	665.00
IUUC-Ttr-128554	Tursiops truncatus	84.84	0.00e+00	775.00
IUUC-Vpa-130407	Vicugna pacos	78.66	0.00e+00	768.00
IUUC-Xtr-132325	Xenopus tropicalis	84.39	0.00e+00	719.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence