iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049552

Ensembl Protein ID

ENSLACP00000016435.1

UniProt Accession

H3B3G4; H3B3G4_LATCH

Genbank Protein ID

ENSLACP00000016435

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01066653

Gene Name

RNF19B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014481.1	ENSLACT00000016549.1	ENSLACP00000016435.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	1.50e-51	175.8	94	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cl+++++e+++ +++C+h+ C +Cl+qyl+++i e++ ++iscp  ec+e+l++++i+ +l ++ l+++ye+++l++++++d++++w
   Q: 94   CPLCLVRQPQENVPEIMTCHHRSCLDCLRQYLRIEITESR-VNISCP--ECSERLNPHDIRMILNDPALMEKYEEFMLRRYLASDPDCRW 180
           ****************************************.9*****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek......eeaeskelleanskkCpkCkvyie 172
           cpapdC ++v++  +a  +k  + +e+c++efC++Ck++wH++++C+++++++a+t + +       ++ +++  ++++k+Cp+C +yi+
   Q: 181  CPAPDCGFAVIAYGCAscPKIMCGREGCKTEFCYHCKQIWHPNQTCDMARQQRAHTLRVRtkqtsgLSYGQESGSADDIKPCPRCGAYII 270
           *************999889999********************************9998888888887788999999************** PP
   S: 173  k..negCnhmtCakCkaefCwlC 193
           k  +++CnhmtCa C++efCwlC
   Q: 271  KmnDGSCNHMTCAVCGCEFCWLC 293
           997889***************** PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MGSEKDSELP HSSIGTAPNP KCPNPGKRRR ISLQSVFNGK SRSKQKREAA AASPEILHSS 60
EEEGQEKKLG SSDSRVTLAS SGSAPKGSSE FLECPLCLVR QPQENVPEIM TCHHRSCLDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCGGGAGA GGATGGTGGG GAACTCCCCT CCTGTGTCTG TCTTGATCGG GGGGCCCTGA 60
GATGGGGACA GAGCCAGGAG TCCAGGACGA TTTACTTGGC AACAGAGGTA AGCAGTTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4

SMART

SM00647--IBR
SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

lcm:102354152

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002183	Ailuropoda melanoleuca	82.78	0.00e+00	874.00
IUUC-Apl-003468	Anas platyrhynchos	81.42	0.00e+00	759.00
IUUC-Aca-004324	Anolis carolinensis	81.67	0.00e+00	892.00
IUUC-Ame-011813	Astyanax mexicanus	61.90	0.00e+00	746.00
IUUC-Bta-013135	Bos taurus	85.04	0.00e+00	924.00
IUUC-Bol-016316	Brassica oleracea	27.96	3.00e-16	79.70
IUUC-Cel-018626	Caenorhabditis elegans	53.37	6.00e-112	398.00
IUUC-Cja-019264	Callithrix jacchus	78.08	0.00e+00	828.00
IUUC-Cpo-022502	Cavia porcellus	85.58	0.00e+00	814.00
IUUC-Cho-025032	Choloepus hoffmanni	70.02	0.00e+00	635.00
IUUC-Cin-025143	Ciona intestinalis	67.80	5.00e-46	177.00
IUUC-Dre-028769	Danio rerio	63.57	0.00e+00	815.00
IUUC-Dor-030551	Dipodomys ordii	90.95	2.00e-113	402.00
IUUC-Ete-033008	Echinops telfairi	71.82	0.00e+00	636.00
IUUC-Eca-033267	Equus caballus	85.12	0.00e+00	754.00
IUUC-Fca-035520	Felis catus	85.33	0.00e+00	756.00
IUUC-Gac-041619	Gasterosteus aculeatus	68.86	0.00e+00	741.00
IUUC-Hsa-045958	Homo sapiens	84.14	0.00e+00	922.00
IUUC-Itr-048425	Ictidomys tridecemlineatus	85.57	0.00e+00	805.00
IUUC-Loc-051738	Lepisosteus oculatus	70.03	0.00e+00	805.00
IUUC-Laf-054252	Loxodonta africana	82.40	0.00e+00	773.00
IUUC-Meu-055920	Macropus eugenii	86.72	0.00e+00	825.00
IUUC-Mdo-061985	Monodelphis domestica	84.50	0.00e+00	931.00
IUUC-Mmu-064262	Mus musculus	85.02	0.00e+00	923.00
IUUC-Mpu-066101	Mustela putorius furo	85.04	0.00e+00	929.00
IUUC-Mlu-067347	Myotis lucifugus	84.68	0.00e+00	762.00
IUUC-Ont-071298	Oreochromis niloticus	69.42	0.00e+00	768.00
IUUC-Oan-073219	Ornithorhynchus anatinus	85.83	0.00e+00	768.00
IUUC-Ocu-073792	Oryctolagus cuniculus	81.40	0.00e+00	730.00
IUUC-Ola-086499	Oryzias latipes	70.03	0.00e+00	779.00
IUUC-Oga-088812	Otolemur garnettii	85.33	0.00e+00	885.00
IUUC-Oar-090353	Ovis aries	86.05	0.00e+00	816.00
IUUC-Psi-092988	Pelodiscus sinensis	81.68	0.00e+00	755.00
IUUC-Pfo-096268	Poecilia formosa	69.73	0.00e+00	782.00
IUUC-Pca-100597	Procavia capensis	85.30	0.00e+00	752.00
IUUC-Sha-106512	Sarcophilus harrisii	83.56	0.00e+00	902.00
IUUC-Sar-113233	Sorex araneus	85.30	0.00e+00	731.00
IUUC-Ssc-115781	Sus scrofa	82.78	0.00e+00	974.00
IUUC-Tgu-117384	Taeniopygia guttata	90.91	0.00e+00	739.00
IUUC-Tru-117919	Takifugu rubripes	69.18	0.00e+00	766.00
IUUC-Tsy-119275	Tarsius syrichta	83.01	0.00e+00	755.00
IUUC-Tbe-127335	Tupaia belangeri	93.77	0.00e+00	639.00
IUUC-Ttr-128554	Tursiops truncatus	86.67	0.00e+00	757.00
IUUC-Vpa-130407	Vicugna pacos	77.34	0.00e+00	756.00
IUUC-Xtr-132325	Xenopus tropicalis	75.09	0.00e+00	745.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence