iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-08	32.9	200	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrtgv 34
           + f ++   l+++s+ g ++++D+r+++
   Q: 200  IGFvDGpSVLATCSRTGYVRIYDTRKQR 227
           4455344679*************99876 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MKWTTANTKH VNYTAKHELY VGTHTGSFKH LVPASEKTPY GQSNLSDLCA LDKDSRVTSL 60
AFGNDDQTEI LLGRAKDAVE IHSFTEKGHS RNTVSFNAAP IVGLARYNDK LIAGIGNGEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACATCTCTA TTGCACGTGT AGGATTTGTT TTGACCGCAC GAATTTGTAT AGCCGCATAC 60
CATTAATTCA CGTTTTAATC GCAAGTATTG AGAGAAACCG CGTCTTGAGA TGAAGTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0030687--C:preribosome, large subunit precursor
GO:0046716--P:muscle cell cellular homeostasis
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

dme:Dmel_CG7845

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000787	Aegilops tauschii	31.16	3.00e-09	55.80
IUUC-Aml-001460	Ailuropoda melanoleuca	31.29	5.00e-34	137.00
IUUC-Atr-002657	Amborella trichopoda	27.53	3.00e-13	68.90
IUUC-Aly-006380	Arabidopsis lyrata	28.74	5.00e-14	71.60
IUUC-Ath-007686	Arabidopsis thaliana	28.16	2.00e-13	69.70
IUUC-Ame-011942	Astyanax mexicanus	30.05	3.00e-38	151.00
IUUC-Bta-013382	Bos taurus	32.34	5.00e-36	144.00
IUUC-Bdi-014280	Brachypodium distachyon	30.29	5.00e-11	61.60
IUUC-Bra-017855	Brassica rapa	29.31	9.00e-15	74.30
IUUC-Cja-018933	Callithrix jacchus	31.60	1.00e-34	139.00
IUUC-Cfa-020634	Canis familiaris	30.93	1.00e-34	139.00
IUUC-Cpo-022089	Cavia porcellus	31.58	1.00e-35	142.00
IUUC-Csa-023835	Chlorocebus sabaeus	30.72	2.00e-35	142.00
IUUC-Cho-024385	Choloepus hoffmanni	45.26	2.00e-15	74.70
IUUC-Cin-025691	Ciona intestinalis	30.96	2.00e-28	118.00
IUUC-Dre-028473	Danio rerio	30.42	5.00e-34	137.00
IUUC-Dno-029687	Dasypus novemcinctus	31.33	2.00e-36	145.00
IUUC-Dor-030529	Dipodomys ordii	30.21	3.00e-23	101.00
IUUC-Ete-032407	Echinops telfairi	25.29	6.00e-10	57.40
IUUC-Eca-033792	Equus caballus	27.52	2.00e-22	99.40
IUUC-Fca-036584	Felis catus	30.29	8.00e-35	140.00
IUUC-Gmo-039064	Gadus morhua	33.23	9.00e-39	153.00
IUUC-Gac-042170	Gasterosteus aculeatus	32.60	2.00e-36	145.00
IUUC-Gma-044150	Glycine max	25.11	3.00e-09	55.80
IUUC-Ggo-044955	Gorilla gorilla	31.02	3.00e-36	144.00
IUUC-Hsa-046615	Homo sapiens	30.72	1.00e-35	142.00
IUUC-Hvu-047119	Hordeum vulgare	28.66	1.00e-10	60.10
IUUC-Itr-048987	Ictidomys tridecemlineatus	30.93	7.00e-35	140.00
IUUC-Kpa-049188	Komagataella pastoris	27.56	8.00e-21	93.60
IUUC-Lch-050396	Latimeria chalumnae	30.33	3.00e-40	158.00
IUUC-Laf-054015	Loxodonta africana	29.87	1.00e-31	129.00
IUUC-Mcc-055589	Macaca mulatta	31.02	5.00e-36	144.00
IUUC-Meu-056160	Macropus eugenii	28.57	3.00e-21	94.70
IUUC-Mtr-057719	Medicago truncatula	23.83	1.00e-10	60.50
IUUC-Mmr-060801	Microcebus murinus	30.42	6.00e-35	140.00
IUUC-Mdo-062069	Monodelphis domestica	33.22	8.00e-33	133.00
IUUC-Mmu-063586	Mus musculus	31.08	6.00e-33	134.00
IUUC-Mpu-066542	Mustela putorius furo	30.25	2.00e-32	132.00
IUUC-Mlu-067520	Myotis lucifugus	35.41	2.00e-26	112.00
IUUC-Nle-069422	Nomascus leucogenys	31.55	1.00e-35	142.00
IUUC-Opr-070402	Ochotona princeps	28.37	3.00e-17	81.60
IUUC-Ont-072078	Oreochromis niloticus	29.60	6.00e-28	117.00
IUUC-Ocu-073886	Oryctolagus cuniculus	31.69	1.00e-31	130.00
IUUC-Obr-076206	Oryza brachyantha	26.89	1.00e-13	70.90
IUUC-Ogl-077112	Oryza glaberrima	29.59	3.00e-13	68.90
IUUC-Ogu-078172	Oryza glumaepatula	29.13	5.00e-12	65.10
IUUC-Oin-080070	Oryza indica	29.59	1.00e-13	70.10
IUUC-Olo-080534	Oryza longistaminata	29.13	5.00e-12	65.50
IUUC-Ome-081869	Oryza meridionalis	29.27	1.00e-12	67.00
IUUC-Opu-083828	Oryza punctata	28.85	4.00e-12	65.10
IUUC-Oru-084690	Oryza rufipogon	29.13	4.00e-12	65.10
IUUC-Ola-087342	Oryzias latipes	31.53	2.00e-29	122.00
IUUC-Oga-088865	Otolemur garnettii	29.82	2.00e-33	135.00
IUUC-Oar-090030	Ovis aries	31.33	4.00e-36	144.00
IUUC-Pan-092461	Papio anubis	31.02	5.00e-36	144.00
IUUC-Psi-093061	Pelodiscus sinensis	31.01	1.00e-35	142.00
IUUC-Pma-094281	Petromyzon marinus	31.31	2.00e-36	145.00
IUUC-Ppa-095623	Physcomitrella patens	26.87	6.00e-16	77.80
IUUC-Pfo-097074	Poecilia formosa	33.02	9.00e-30	123.00
IUUC-Pab-098290	Pongo abelii	31.02	4.00e-36	144.00
IUUC-Pop-099602	Populus trichocarpa	30.46	4.00e-13	68.20
IUUC-Pca-100383	Procavia capensis	30.60	3.00e-32	131.00
IUUC-Ppe-101867	Prunus persica	26.96	2.00e-12	66.20
IUUC-Pva-103218	Pteropus vampyrus	31.22	8.00e-18	84.00
IUUC-Rno-105494	Rattus norvegicus	31.83	9.00e-36	143.00
IUUC-Sha-107127	Sarcophilus harrisii	36.33	2.00e-32	132.00
IUUC-Sit-110466	Setaria italica	29.08	1.00e-10	60.80
IUUC-Sbi-113854	Sorghum bicolor	28.43	6.00e-12	64.70
IUUC-Ssc-116144	Sus scrofa	31.40	2.00e-33	135.00
IUUC-Tru-118516	Takifugu rubripes	29.34	3.00e-30	125.00
IUUC-Tni-120527	Tetraodon nigroviridis	29.75	7.00e-32	130.00
IUUC-Tae-123391	Triticum aestivum	29.12	6.00e-11	61.20
IUUC-Tur-126054	Triticum urartu	30.61	3.00e-10	59.30
IUUC-Tbe-127232	Tupaia belangeri	31.28	5.00e-18	84.30
IUUC-Ttr-128529	Tursiops truncatus	32.25	6.00e-36	144.00
IUUC-Vpa-130703	Vicugna pacos	31.01	2.00e-11	62.40
IUUC-Vvi-131680	Vitis vinifera	27.39	1.00e-12	66.60
IUUC-Xtr-132802	Xenopus tropicalis	30.99	4.00e-27	114.00
IUUC-Xma-133396	Xiphophorus maculatus	29.56	9.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence