iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1908__AT1G76260.1	fgenesh2_kg.2__1908__AT1G76260.1	fgenesh2_kg.2__1908__AT1G76260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-13	49.0	313	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikv 27
           +dsv++la+   + ++++s s+Dg + +
   Q: 313  EDSVYGLAWslREpWIFASLSYDGRVVI 340
           699********6669**********987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQGGSSGIGY GLKYQARCIS DVKADRDHTS FLTGTLSLKE ENEVHLLRLS SGGSELLCEG 60
LFSHPNEIWD LASCPFDQRI FSTVFSTGES FGAAIWQIPE PYGQSNSSTL ECVASLDAHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTTCTCGA AACCCAGCAA AATCAGAGAG CGGCAAATCG TTGAAGAGAG ATCTTCTTCT 60
TCCTGAATCC GTAACGTTGG CTGAGGCGTG AGAACACAAT GCAAGGTGGA TCATCGGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0016567--P:protein ubiquitination

KEGG

aly:ARALYDRAFT_476778

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006902	Arabidopsis thaliana	96.57	0.00e+00	660.00
IUUC-Bra-017885	Brassica rapa	93.43	0.00e+00	654.00
IUUC-Cfa-020214	Canis familiaris	33.06	6.00e-48	184.00
IUUC-Cho-024713	Choloepus hoffmanni	31.31	4.00e-44	171.00
IUUC-Cin-025678	Ciona intestinalis	31.68	3.00e-42	165.00
IUUC-Ete-032575	Echinops telfairi	27.89	1.00e-26	113.00
IUUC-Eca-034323	Equus caballus	31.95	2.00e-32	132.00
IUUC-Eeu-035217	Erinaceus europaeus	27.67	3.00e-25	108.00
IUUC-Fca-035709	Felis catus	31.85	2.00e-38	152.00
IUUC-Gac-041368	Gasterosteus aculeatus	30.23	6.00e-21	94.40
IUUC-Itr-048726	Ictidomys tridecemlineatus	36.92	2.00e-37	148.00
IUUC-Mmr-061706	Microcebus murinus	33.06	2.00e-50	192.00
IUUC-Mpu-066514	Mustela putorius furo	33.51	5.00e-50	191.00
IUUC-Ont-072532	Oreochromis niloticus	32.54	4.00e-49	187.00
IUUC-Oan-073222	Ornithorhynchus anatinus	31.85	1.00e-42	166.00
IUUC-Oga-088180	Otolemur garnettii	33.22	9.00e-37	146.00
IUUC-Pma-094439	Petromyzon marinus	32.36	3.00e-44	171.00
IUUC-Pfo-096127	Poecilia formosa	34.30	6.00e-50	190.00
IUUC-Sar-113084	Sorex araneus	31.10	3.00e-18	85.10
IUUC-Ssc-115385	Sus scrofa	33.33	2.00e-49	188.00
IUUC-Tni-120311	Tetraodon nigroviridis	30.08	8.00e-35	140.00
IUUC-Ttr-128706	Tursiops truncatus	30.57	4.00e-29	121.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence