iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098864

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_550783; POPTR_0002s01250g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s27120	POPTR_0005s27120.1	POPTR_0005s27120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-11	44.0	314	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikv 27
           +dsv++la+   + ++++s s+Dg + v
   Q: 314  EDSVYGLAWssREpWIFASLSYDGRVVV 341
           699******9855799*********987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQGGSSGIGY GLKYQARCIS DVKADTDHTS FITGTLSLRE ENEVHLLRLS SGGTELICEG 60
LFSHPNEIWD LSSCPFDQRI FSTVFSTGES FGAAVWQIPE LYGQLNSPQL ERIASLDGHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGATTCCA CACAATACCT TTGCTTCGAT CTTGGCTTCA TCATCTTCAA GTAAAGCGAG 60
AAGAAAAAAA AAATGCAAGG AGGATCATCA GGCATTGGCT ATGGACTCAA ATATCAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0002s01250g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	61.51	8.00e-110	389.00
IUUC-Aml-002348	Ailuropoda melanoleuca	33.89	8.00e-31	126.00
IUUC-Atr-003028	Amborella trichopoda	65.98	6.00e-141	493.00
IUUC-Apl-004211	Anas platyrhynchos	29.85	2.00e-44	172.00
IUUC-Aca-004893	Anolis carolinensis	32.35	5.00e-48	184.00
IUUC-Aly-005975	Arabidopsis lyrata	83.43	1.00e-175	608.00
IUUC-Ath-007527	Arabidopsis thaliana	82.57	4.00e-178	616.00
IUUC-Ame-010619	Astyanax mexicanus	31.93	1.00e-48	186.00
IUUC-Bta-013035	Bos taurus	32.43	9.00e-47	180.00
IUUC-Bdi-014619	Brachypodium distachyon	63.92	1.00e-134	471.00
IUUC-Bol-016581	Brassica oleracea	80.57	4.00e-174	603.00
IUUC-Bra-017467	Brassica rapa	80.00	2.00e-173	601.00
IUUC-Cel-018344	Caenorhabditis elegans	26.89	3.00e-33	135.00
IUUC-Cja-018975	Callithrix jacchus	29.78	1.00e-45	177.00
IUUC-Cfa-020214	Canis familiaris	31.99	1.00e-44	173.00
IUUC-Cpo-021363	Cavia porcellus	32.35	5.00e-44	171.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	30.06	6.00e-41	160.00
IUUC-Csa-023240	Chlorocebus sabaeus	31.72	9.00e-45	173.00
IUUC-Cho-024713	Choloepus hoffmanni	29.68	6.00e-41	160.00
IUUC-Cin-025678	Ciona intestinalis	29.75	3.00e-40	158.00
IUUC-Csv-026022	Ciona savignyi	29.67	3.00e-40	158.00
IUUC-Dre-027817	Danio rerio	31.13	2.00e-49	189.00
IUUC-Dno-030097	Dasypus novemcinctus	31.72	8.00e-45	173.00
IUUC-Dme-031866	Drosophila melanogaster	31.88	8.00e-39	154.00
IUUC-Ete-032575	Echinops telfairi	26.62	2.00e-23	102.00
IUUC-Eca-034323	Equus caballus	31.58	9.00e-29	119.00
IUUC-Eeu-035217	Erinaceus europaeus	26.18	9.00e-23	100.00
IUUC-Fca-035709	Felis catus	31.85	1.00e-35	142.00
IUUC-Fal-036989	Ficedula albicollis	31.82	3.00e-49	188.00
IUUC-Gmo-038623	Gadus morhua	29.41	9.00e-41	160.00
IUUC-Gga-040157	Gallus gallus	33.33	1.00e-51	196.00
IUUC-Gac-041368	Gasterosteus aculeatus	31.31	8.00e-19	87.40
IUUC-Gma-044196	Glycine max	78.06	6.00e-167	579.00
IUUC-Ggo-044513	Gorilla gorilla	29.22	6.00e-42	164.00
IUUC-Hsa-046844	Homo sapiens	29.78	1.00e-42	167.00
IUUC-Hvu-047435	Hordeum vulgare	63.07	2.00e-133	468.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	34.90	3.00e-34	137.00
IUUC-Lch-049696	Latimeria chalumnae	31.40	5.00e-49	187.00
IUUC-Lpe-050988	Leersia perrieri	62.60	2.00e-99	354.00
IUUC-Loc-052440	Lepisosteus oculatus	32.11	2.00e-49	188.00
IUUC-Laf-054088	Loxodonta africana	32.35	5.00e-44	171.00
IUUC-Mcc-055575	Macaca mulatta	28.79	2.00e-40	159.00
IUUC-Meu-056807	Macropus eugenii	34.67	4.00e-28	118.00
IUUC-Mtr-058599	Medicago truncatula	75.21	2.00e-161	560.00
IUUC-Mga-059336	Meleagris gallopavo	31.88	6.00e-47	181.00
IUUC-Mmr-061706	Microcebus murinus	31.82	6.00e-47	181.00
IUUC-Mdo-062736	Monodelphis domestica	31.45	8.00e-46	177.00
IUUC-Mmu-064265	Mus musculus	32.25	2.00e-48	186.00
IUUC-Mac-065342	Musa acuminata	69.52	8.00e-147	512.00
IUUC-Mpu-066514	Mustela putorius furo	31.89	7.00e-47	180.00
IUUC-Mlu-067072	Myotis lucifugus	34.69	2.00e-29	121.00
IUUC-Nle-069307	Nomascus leucogenys	27.82	2.00e-35	142.00
IUUC-Opr-070283	Ochotona princeps	28.12	1.00e-27	117.00
IUUC-Ont-072532	Oreochromis niloticus	29.82	2.00e-44	172.00
IUUC-Oan-073222	Ornithorhynchus anatinus	31.29	4.00e-39	154.00
IUUC-Oba-075849	Oryza barthii	59.56	2.00e-111	395.00
IUUC-Obr-076488	Oryza brachyantha	63.32	4.00e-122	430.00
IUUC-Ogl-077928	Oryza glaberrima	61.25	1.00e-115	409.00
IUUC-Ogu-077997	Oryza glumaepatula	59.56	1.00e-112	399.00
IUUC-Oin-079848	Oryza indica	60.82	2.00e-114	405.00
IUUC-Oni-082492	Oryza nivara	59.56	2.00e-111	394.00
IUUC-Oru-085119	Oryza rufipogon	59.56	2.00e-111	394.00
IUUC-Osa-086152	Oryza sativa	61.13	4.00e-115	407.00
IUUC-Ola-086694	Oryzias latipes	29.20	2.00e-44	172.00
IUUC-Olu-087749	Ostreococcus lucimarinus	31.76	2.00e-21	94.70
IUUC-Oga-088180	Otolemur garnettii	32.28	8.00e-33	133.00
IUUC-Oar-089621	Ovis aries	26.79	5.00e-25	107.00
IUUC-Ptr-091053	Pan troglodytes	31.18	7.00e-41	160.00
IUUC-Pan-091918	Papio anubis	31.45	3.00e-44	171.00
IUUC-Psi-093545	Pelodiscus sinensis	31.38	3.00e-48	185.00
IUUC-Pma-094439	Petromyzon marinus	31.22	2.00e-42	166.00
IUUC-Pfo-096127	Poecilia formosa	30.87	2.00e-46	179.00
IUUC-Pab-097916	Pongo abelii	30.58	1.00e-41	163.00
IUUC-Pca-100797	Procavia capensis	35.27	2.00e-28	119.00
IUUC-Ppe-101796	Prunus persica	82.34	2.00e-177	614.00
IUUC-Pva-103228	Pteropus vampyrus	31.08	5.00e-44	171.00
IUUC-Rno-104877	Rattus norvegicus	33.15	2.00e-47	182.00
IUUC-Sha-106940	Sarcophilus harrisii	31.64	5.00e-47	181.00
IUUC-Smo-109355	Selaginella moellendorffii	47.32	9.00e-98	349.00
IUUC-Sit-109958	Setaria italica	62.22	7.00e-134	469.00
IUUC-Sly-111871	Solanum lycopersicum	76.35	3.00e-164	570.00
IUUC-Stu-112128	Solanum tuberosum	76.35	4.00e-160	556.00
IUUC-Sar-113084	Sorex araneus	31.58	5.00e-17	81.30
IUUC-Sbi-114122	Sorghum bicolor	62.78	8.00e-132	462.00
IUUC-Ssc-115385	Sus scrofa	33.06	2.00e-44	172.00
IUUC-Tgu-117090	Taeniopygia guttata	31.62	7.00e-45	173.00
IUUC-Tru-118548	Takifugu rubripes	28.33	4.00e-44	171.00
IUUC-Tsy-119435	Tarsius syrichta	28.57	3.00e-40	159.00
IUUC-Tni-120311	Tetraodon nigroviridis	28.84	3.00e-36	145.00
IUUC-Tca-121141	Theobroma cacao	85.75	0.00e+00	647.00
IUUC-Tae-122717	Triticum aestivum	63.35	8.00e-134	469.00
IUUC-Ttr-128706	Tursiops truncatus	30.83	4.00e-25	108.00
IUUC-Vvi-130871	Vitis vinifera	84.05	2.00e-178	617.00
IUUC-Xtr-131950	Xenopus tropicalis	32.26	2.00e-50	192.00
IUUC-Xma-133364	Xiphophorus maculatus	30.08	2.00e-45	175.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence