iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116235

Ensembl Protein ID

ENSSSCP00000026688.1

UniProt Accession

I3LRF4; I3LRF4_PIG

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029025.1	ENSSSCT00000029579.1	ENSSSCP00000026688.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-47	157.0	105	140
UBD/Beta-Prp	5.60e-71	239.4	95	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           Ht +v+c +f +d +l+vs+s D+tik+WD++   +
   Q: 105  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTNKQC 140
           9**********999****************987665 PP

UBD/Beta-Prp

   S: 41   tgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcl 129
           ++ +l sl+ h+  v++ kfspdg ++v++seD+tik+wd  + +cv  ++     +  ++f+p+g  ++s+++d t+++wd++ ++ l
   Q: 95   RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLL 183
           56667777777777777777777777777777777777777777777777777777777777777777777777777777777777777 PP
   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           +   ++h+g vncv++hp+gn+l+++s D+t+++ dl  g+l++tl+g ht++v  +sf++ g+ + sg+ d +v lw  
   Q: 184  Q-HYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG-HTGPVFTVSFSKGGELFTSGGADAQVLLWRT 261
           7.7777777777777777777777777777777777777777777777.7777777777777777777777777777765 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

ATGSWDTFLM LWSFKPQARA FRYVGHKDVV TSVQFSPLGN LLASASRDRT VRLWIPDKRG 60
KSSEFKAHTA PVRSVDFSAD GQFLATASED KSIHRQRFLY SLYRHTHWVR CAKFSPDGRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTACCGGTT CTTGGGATAC CTTTCTCATG CTCTGGAGTT TCAAGCCGCA AGCTAGAGCT 60
TTCAGATATG TGGGTCACAA GGACGTTGTA ACCAGCGTGC AGTTTTCTCC TCTGGGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence