• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Pop-099925
UUCD1 version UUC-PoT-00756
Ensembl Protein ID POPTR_0003s05930.1
UniProt Accession B9GWE4; B9GWE4_POPTR
Genbank Protein ID EEE79139.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000339
Gene Name POPTRDRAFT_645875; POPTR_0003s05930g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0003s05930 POPTR_0003s05930.1 POPTR_0003s05930.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-22 79.9 113 146
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
    gH+++v++l f ++ l+s+s+D+t+++WD+ +
   Q: 113 GHAGPVHGLTFsPSnAVLASSSWDKTVRLWDVFE 146
    8**********9554789*************855 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MSCECVCIFL SQVWTVSSGF CFVTFSEHTN AVTALHFMAN NHCLLSASLD GTVRAWDLFR 60
YRNFRTFTTP SSRQFVSLAA DQSGEVICAG TLDSFEIFVW SMKTGRLLDV LSGHAGPVHG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099925|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCATGTG AATGTGTTTG TATTTTCTTG TCACAGGTGT GGACCGTTTC ATCTGGCTTT 60
TGCTTTGTAA CATTCTCAGA GCACACAAAT GCTGTGACCG CGCTTCATTT TATGGCAAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099925|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

KEGG pop:POPTR_0003s05930g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ame-011648 Astyanax mexicanus 57.58 1.00e-28 117.00
IUUC-Sha-107264 Sarcophilus harrisii 40.90 2.00e-86 312.00
IUUC-Ssc-115931 Sus scrofa 44.10 7.00e-93 333.00
IUUC-Tsy-119401 Tarsius syrichta 47.07 5.00e-121 428.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved