iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000018002.3	ENSXETT00000039032.3	ENSXETP00000039032.3
ENSXETG00000018002.3	ENSXETT00000062932.1	ENSXETP00000060229.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-13	50.4	281	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++++c+af +    l+++s+D+t+++WD+
   Q: 281  GHEGPISCVAFnPWrSVLATASWDKTVRLWDM 312
           8**********865667**************7 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

RCFAVGSKDM STWVFGAERW QNLIYYSLGG HKDAIVACFF QEGSLDLYTI SADATLCVWG 60
CDTELAQLLP RDPDKKARES GGAEEPRAEE IRGTANPAPE ESVGRVRYRK SSRHFFNKEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATGCTTTG CTGTGGGGAG TAAGGACATG TCCACCTGGG TGTTTGGGGC AGAGCGGTGG 60
CAGAATCTCA TTTACTACTC CCTGGGGGGG CACAAGGATG CCATCGTGGC TTGTTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0055123--P:digestive system development
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	52.21	2.00e-123	436.00
IUUC-Atr-003033	Amborella trichopoda	35.29	5.00e-62	232.00
IUUC-Apl-003219	Anas platyrhynchos	51.46	2.00e-124	440.00
IUUC-Aca-004950	Anolis carolinensis	51.11	9.00e-123	434.00
IUUC-Aly-006213	Arabidopsis lyrata	34.18	4.00e-62	233.00
IUUC-Ath-006593	Arabidopsis thaliana	35.19	8.00e-64	238.00
IUUC-Ago-007916	Ashbya gossypii	34.25	4.00e-59	223.00
IUUC-Acl-008225	Aspergillus clavatus	34.09	3.00e-60	226.00
IUUC-Afl-008390	Aspergillus flavus	34.09	1.00e-58	221.00
IUUC-Afu-009039	Aspergillus fumigatus	33.97	3.00e-62	233.00
IUUC-Ani-009228	Aspergillus nidulans	28.93	3.00e-32	134.00
IUUC-Ang-009663	Aspergillus niger	34.07	7.00e-53	202.00
IUUC-Aor-009923	Aspergillus oryzae	34.09	1.00e-58	221.00
IUUC-Ate-010264	Aspergillus terreus	35.61	9.00e-63	235.00
IUUC-Ame-010790	Astyanax mexicanus	52.36	5.00e-50	191.00
IUUC-Bgr-012066	Blumeria graminis	32.99	3.00e-56	213.00
IUUC-Bta-012399	Bos taurus	52.07	5.00e-123	435.00
IUUC-Bci-013757	Botrytis cinerea	34.69	7.00e-56	212.00
IUUC-Bdi-015028	Brachypodium distachyon	37.24	2.00e-63	237.00
IUUC-Bol-016521	Brassica oleracea	34.68	3.00e-61	230.00
IUUC-Bra-017096	Brassica rapa	34.68	2.00e-63	237.00
IUUC-Cel-018690	Caenorhabditis elegans	26.21	4.00e-48	186.00
IUUC-Cja-019229	Callithrix jacchus	51.26	1.00e-122	434.00
IUUC-Cfa-020504	Canis familiaris	52.47	5.00e-124	438.00
IUUC-Cpo-021574	Cavia porcellus	51.95	6.00e-123	435.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	30.86	3.00e-47	183.00
IUUC-Csa-023436	Chlorocebus sabaeus	51.95	3.00e-124	439.00
IUUC-Cin-025397	Ciona intestinalis	46.25	6.00e-60	225.00
IUUC-Csv-026194	Ciona savignyi	38.26	1.00e-71	265.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	33.25	2.00e-48	187.00
IUUC-Cne-027031	Cryptococcus neoformans	32.12	1.00e-56	214.00
IUUC-Dre-027514	Danio rerio	47.53	4.00e-115	409.00
IUUC-Dno-029191	Dasypus novemcinctus	51.15	4.00e-120	425.00
IUUC-Dor-030149	Dipodomys ordii	51.37	8.00e-121	427.00
IUUC-Dse-031260	Dothistroma septosporum	32.66	3.00e-53	202.00
IUUC-Dme-032043	Drosophila melanogaster	31.39	1.00e-52	201.00
IUUC-Ete-033102	Echinops telfairi	61.45	7.00e-88	318.00
IUUC-Eca-033223	Equus caballus	52.17	4.00e-124	439.00
IUUC-Fca-035795	Felis catus	49.89	2.00e-112	400.00
IUUC-Fal-036830	Ficedula albicollis	52.15	2.00e-126	446.00
IUUC-Fox-037835	Fusarium oxysporum	31.25	7.00e-50	192.00
IUUC-Fso-038324	Fusarium solani	31.96	6.00e-53	202.00
IUUC-Gmo-039355	Gadus morhua	48.43	1.00e-115	410.00
IUUC-Ggr-039840	Gaeumannomyces graminis	32.73	2.00e-43	170.00
IUUC-Gga-040907	Gallus gallus	52.05	4.00e-125	441.00
IUUC-Gac-042624	Gasterosteus aculeatus	47.06	3.00e-113	402.00
IUUC-Gma-043034	Glycine max	35.93	2.00e-63	237.00
IUUC-Hsa-046327	Homo sapiens	51.72	3.00e-123	436.00
IUUC-Hvu-047416	Hordeum vulgare	35.92	1.00e-60	228.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	50.00	1.00e-121	430.00
IUUC-Kpa-049150	Komagataella pastoris	31.20	4.00e-53	203.00
IUUC-Lch-049460	Latimeria chalumnae	51.25	7.00e-121	428.00
IUUC-Lpe-050840	Leersia perrieri	34.93	7.00e-65	242.00
IUUC-Loc-052733	Lepisosteus oculatus	45.43	4.00e-111	395.00
IUUC-Lma-053277	Leptosphaeria maculans	34.37	1.00e-55	211.00
IUUC-Laf-054294	Loxodonta africana	51.57	5.00e-105	375.00
IUUC-Mcc-054624	Macaca mulatta	52.07	9.00e-124	437.00
IUUC-Meu-056665	Macropus eugenii	48.54	4.00e-61	229.00
IUUC-Mor-057288	Magnaporthe oryzae	33.07	3.00e-49	190.00
IUUC-Mpo-057594	Magnaporthe poae	32.65	4.00e-44	173.00
IUUC-Mtr-058700	Medicago truncatula	37.56	5.00e-66	245.00
IUUC-Mla-058846	Melampsora laricipopulina	35.76	5.00e-60	226.00
IUUC-Mga-059207	Meleagris gallopavo	60.19	2.00e-70	260.00
IUUC-Mvi-060327	Microbotryum violaceum	35.90	1.00e-58	221.00
IUUC-Mmr-061264	Microcebus murinus	51.37	5.00e-122	432.00
IUUC-Mdo-062327	Monodelphis domestica	48.81	4.00e-119	422.00
IUUC-Mmu-063542	Mus musculus	51.26	3.00e-121	429.00
IUUC-Mac-065142	Musa acuminata	33.95	1.00e-62	234.00
IUUC-Mpu-066098	Mustela putorius furo	52.05	3.00e-122	432.00
IUUC-Mlu-067056	Myotis lucifugus	50.68	1.00e-117	417.00
IUUC-Nfi-068323	Neosartorya fischeri	35.26	8.00e-62	232.00
IUUC-Ncr-068925	Neurospora crassa	33.16	2.00e-53	204.00
IUUC-Nle-068970	Nomascus leucogenys	51.02	2.00e-121	430.00
IUUC-Opr-070966	Ochotona princeps	58.55	3.00e-46	179.00
IUUC-Ont-071252	Oreochromis niloticus	50.63	1.00e-114	407.00
IUUC-Oan-072737	Ornithorhynchus anatinus	49.02	8.00e-120	424.00
IUUC-Oba-075794	Oryza barthii	35.03	6.00e-65	242.00
IUUC-Obr-076617	Oryza brachyantha	36.32	4.00e-65	243.00
IUUC-Ogl-077022	Oryza glaberrima	37.37	9.00e-66	244.00
IUUC-Ogu-078757	Oryza glumaepatula	30.51	3.00e-72	266.00
IUUC-Oin-079813	Oryza indica	36.87	5.00e-64	239.00
IUUC-Olo-080265	Oryza longistaminata	37.37	1.00e-65	244.00
IUUC-Ome-081494	Oryza meridionalis	37.37	9.00e-66	244.00
IUUC-Oni-082639	Oryza nivara	30.36	5.00e-71	262.00
IUUC-Opu-084005	Oryza punctata	37.37	3.00e-66	246.00
IUUC-Oru-084883	Oryza rufipogon	30.32	3.00e-71	263.00
IUUC-Osa-086158	Oryza sativa	37.12	3.00e-65	243.00
IUUC-Ola-086822	Oryzias latipes	46.73	4.00e-113	402.00
IUUC-Oga-088887	Otolemur garnettii	52.07	3.00e-123	436.00
IUUC-Oar-090110	Ovis aries	51.95	1.00e-123	437.00
IUUC-Pan-092808	Papio anubis	51.84	2.00e-123	436.00
IUUC-Psi-093954	Pelodiscus sinensis	52.29	5.00e-125	442.00
IUUC-Pno-094922	Phaeosphaeria nodorum	35.10	1.00e-60	227.00
IUUC-Ppa-095678	Physcomitrella patens	33.76	3.00e-49	190.00
IUUC-Pfo-097175	Poecilia formosa	47.05	2.00e-113	403.00
IUUC-Pab-098155	Pongo abelii	51.72	1.00e-124	441.00
IUUC-Pop-099635	Populus trichocarpa	35.01	7.00e-60	225.00
IUUC-Pca-100947	Procavia capensis	57.62	1.00e-124	440.00
IUUC-Ppe-101552	Prunus persica	34.53	4.00e-64	239.00
IUUC-Pva-102744	Pteropus vampyrus	51.32	6.00e-125	441.00
IUUC-Pgr-103389	Puccinia graminis	38.19	8.00e-61	228.00
IUUC-Ptt-103953	Puccinia triticina	37.95	5.00e-61	229.00
IUUC-Pte-104079	Pyrenophora teres	34.64	3.00e-59	223.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	34.40	6.00e-59	222.00
IUUC-Rno-105502	Rattus norvegicus	51.49	1.00e-121	430.00
IUUC-Sce-106390	Saccharomyces cerevisiae	33.86	2.00e-57	217.00
IUUC-Sha-107264	Sarcophilus harrisii	51.29	2.00e-118	418.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	33.84	5.00e-59	222.00
IUUC-Spo-108348	Schizosaccharomyces pombe	33.92	1.00e-54	207.00
IUUC-Smo-108982	Selaginella moellendorffii	34.27	1.00e-53	204.00
IUUC-Sit-110304	Setaria italica	37.44	4.00e-67	249.00
IUUC-Sly-111620	Solanum lycopersicum	35.70	1.00e-64	240.00
IUUC-Stu-112877	Solanum tuberosum	35.55	3.00e-64	239.00
IUUC-Sbi-114702	Sorghum bicolor	37.44	4.00e-69	256.00
IUUC-Sre-115129	Sporisorium reilianum	29.18	1.00e-53	204.00
IUUC-Ssc-115931	Sus scrofa	55.95	5.00e-123	434.00
IUUC-Tgu-116787	Taeniopygia guttata	52.29	7.00e-125	441.00
IUUC-Tru-118218	Takifugu rubripes	48.64	4.00e-112	399.00
IUUC-Tsy-119401	Tarsius syrichta	51.00	2.00e-125	443.00
IUUC-Tni-120046	Tetraodon nigroviridis	49.51	3.00e-110	392.00
IUUC-Tca-121685	Theobroma cacao	35.88	2.00e-64	240.00
IUUC-Tre-122154	Trichoderma reesei	34.46	1.00e-56	214.00
IUUC-Tvi-122451	Trichoderma virens	33.08	2.00e-56	214.00
IUUC-Tae-125397	Triticum aestivum	35.92	8.00e-60	225.00
IUUC-Tur-126650	Triticum urartu	36.18	1.00e-62	234.00
IUUC-Tme-127005	Tuber melanosporum	33.16	1.00e-54	208.00
IUUC-Tbe-128102	Tupaia belangeri	59.28	1.00e-51	198.00
IUUC-Ttr-128259	Tursiops truncatus	51.09	2.00e-108	387.00
IUUC-Uma-129511	Ustilago maydis	40.82	3.00e-50	193.00
IUUC-Vda-129833	Verticillium dahliae	29.82	9.00e-37	148.00
IUUC-Vvi-131572	Vitis vinifera	35.62	3.00e-65	243.00
IUUC-Xma-133887	Xiphophorus maculatus	47.50	2.00e-107	383.00
IUUC-Yli-134427	Yarrowia lipolytica	34.20	2.00e-57	218.00
IUUC-Zma-135980	Zea mays	37.44	8.00e-69	255.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence