iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135774

Ensembl Protein ID

Zm00001d044193_T002

UniProt Accession

B6TS03; B6TS03_MAIZE

Genbank Protein ID

ACG39886.1; ONM40394.1

Protein Name

Seh1-like protein

Genbank Nucleotide ID

EU967768; CM007649

Gene Name

ZEAMMB73_Zm00001d044193

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d044193	Zm00001d044193_T003	Zm00001d044193_T003
Zm00001d044193	Zm00001d044193_T002	Zm00001d044193_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-13	50.8	273	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH ++v+ l++   + +l+s ++Dg +k+W 
   Q: 273  GHDGEVWQLEWdmGGMTLASTGGDGMVKLWQ 303
           8**********654355999999*******5 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MTERQVAELG PGTACCGWNH CGRRLAAGAV DGSVSVYDSQ PPPSFKWQAH EQAIVNVVWL 60
PPEYGDAIAC VCADGTLSLW EEVAADDQLP TWRNCKIFED GNSHILNVHF GLHLGILKMV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCACAGA TCTCAGGCGT TGGACTTTGA GTGCTTGGGC TAGGATTCCT TGCCAAACAG 60
ACCTGAGTGC ATGACAGCGA CAGCCTTCTG GGCTCACTCG CACGGTCGCA CCCGAAACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

zma:100284280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	67.00	1.00e-82	298.00
IUUC-Apl-003654	Anas platyrhynchos	30.00	1.00e-27	116.00
IUUC-Aca-004378	Anolis carolinensis	29.66	2.00e-27	115.00
IUUC-Aly-005963	Arabidopsis lyrata	57.81	5.00e-108	383.00
IUUC-Ath-007107	Arabidopsis thaliana	56.88	3.00e-109	387.00
IUUC-Bdi-014594	Brachypodium distachyon	87.27	4.00e-167	579.00
IUUC-Bol-016565	Brassica oleracea	57.41	5.00e-108	383.00
IUUC-Bra-017831	Brassica rapa	57.72	4.00e-109	387.00
IUUC-Cho-024660	Choloepus hoffmanni	29.66	8.00e-28	117.00
IUUC-Eca-033425	Equus caballus	29.33	4.00e-27	114.00
IUUC-Fal-037234	Ficedula albicollis	30.00	5.00e-27	117.00
IUUC-Gma-044300	Glycine max	60.12	5.00e-113	400.00
IUUC-Hvu-047455	Hordeum vulgare	82.61	2.00e-161	560.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	29.68	2.00e-27	115.00
IUUC-Lch-050466	Latimeria chalumnae	28.77	9.00e-28	117.00
IUUC-Lpe-051064	Leersia perrieri	85.09	1.00e-163	568.00
IUUC-Meu-055958	Macropus eugenii	28.14	1.00e-17	83.20
IUUC-Mtr-057876	Medicago truncatula	55.42	1.00e-107	382.00
IUUC-Mla-058820	Melampsora laricipopulina	21.43	1.00e-14	73.20
IUUC-Mga-059348	Meleagris gallopavo	30.00	1.00e-27	116.00
IUUC-Mdo-061806	Monodelphis domestica	30.09	9.00e-32	130.00
IUUC-Mmu-064328	Mus musculus	30.72	8.00e-35	140.00
IUUC-Mac-064960	Musa acuminata	63.41	1.00e-118	419.00
IUUC-Nle-068977	Nomascus leucogenys	29.43	4.00e-29	121.00
IUUC-Opr-070773	Ochotona princeps	26.05	8.00e-12	64.30
IUUC-Oan-073098	Ornithorhynchus anatinus	30.34	4.00e-29	121.00
IUUC-Oba-075325	Oryza barthii	80.86	3.00e-147	514.00
IUUC-Obr-076089	Oryza brachyantha	83.95	5.00e-160	556.00
IUUC-Ogl-077279	Oryza glaberrima	85.80	9.00e-162	561.00
IUUC-Ogu-078901	Oryza glumaepatula	80.56	1.00e-146	511.00
IUUC-Oin-079385	Oryza indica	80.40	2.00e-158	551.00
IUUC-Ome-081809	Oryza meridionalis	87.36	1.00e-146	513.00
IUUC-Oni-082185	Oryza nivara	77.78	7.00e-139	485.00
IUUC-Opu-083324	Oryza punctata	84.16	5.00e-160	556.00
IUUC-Oru-084801	Oryza rufipogon	86.42	6.00e-163	565.00
IUUC-Osa-085790	Oryza sativa	85.80	9.00e-162	561.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.55	3.00e-13	68.60
IUUC-Oar-090298	Ovis aries	29.68	4.00e-26	114.00
IUUC-Psi-093508	Pelodiscus sinensis	30.34	4.00e-28	118.00
IUUC-Ppa-095228	Physcomitrella patens	42.43	4.00e-69	254.00
IUUC-Pop-099015	Populus trichocarpa	57.32	8.00e-111	392.00
IUUC-Ppe-101303	Prunus persica	59.63	2.00e-116	411.00
IUUC-Rno-104895	Rattus norvegicus	30.34	3.00e-31	131.00
IUUC-Sha-106829	Sarcophilus harrisii	30.00	5.00e-29	121.00
IUUC-Smo-109282	Selaginella moellendorffii	44.03	2.00e-72	265.00
IUUC-Sit-110393	Setaria italica	90.40	1.00e-175	608.00
IUUC-Sly-111125	Solanum lycopersicum	58.75	9.00e-115	405.00
IUUC-Stu-112745	Solanum tuberosum	52.65	1.00e-111	395.00
IUUC-Sar-113279	Sorex araneus	29.33	6.00e-27	114.00
IUUC-Sbi-114110	Sorghum bicolor	95.96	0.00e+00	640.00
IUUC-Ssc-115589	Sus scrofa	29.90	3.00e-28	118.00
IUUC-Tru-117985	Takifugu rubripes	28.92	3.00e-26	114.00
IUUC-Tsy-118913	Tarsius syrichta	29.51	4.00e-24	105.00
IUUC-Tca-120999	Theobroma cacao	50.83	9.00e-98	350.00
IUUC-Tae-122796	Triticum aestivum	82.61	1.00e-161	561.00
IUUC-Tur-126582	Triticum urartu	78.67	3.00e-134	471.00
IUUC-Tbe-127344	Tupaia belangeri	26.79	2.00e-15	76.30
IUUC-Ttr-128347	Tursiops truncatus	29.68	3.00e-27	115.00
IUUC-Vpa-130656	Vicugna pacos	30.04	4.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence