iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069395

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01055488

Gene Name

RAE1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000007055.2	ENSNLET00000009007.2	ENSNLEP00000008600.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-14	53.2	143	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgv 34
           H ++v  +++   s    + +Gs+D+t+k WD+r+ +
   Q: 143  HDAPVKTIHWikaSKySCVMTGSWDKTLKFWDTRSSN 179
           999*********8655569*************99865 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MISRKKPGVG EVLAGVKMSL FGTTSGFGTS GTSMFGSATT DNHNPMKDIE VTSSPDDSIG 60
CLSFSPPTLP GNFLIAGSWA NDVRCWEVQD SGQTIPKAQQ MHTGPVLDVC WSDDGSKVFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCAGGAAAA TGAAGCCTGG TGAGATTAGA GTCCCAACTC CTGAGTGGCA AGAGGCCCTG 60
ACCAAACCCT GGTGGGGCTA TTAGATTATG ATATCCAGGA AAAAACCCGG CGTGGGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0005643--C:nuclear pore
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	41.27	9.00e-61	227.00
IUUC-Aml-002179	Ailuropoda melanoleuca	84.64	7.00e-171	592.00
IUUC-Atr-002609	Amborella trichopoda	41.89	7.00e-67	247.00
IUUC-Apl-003637	Anas platyrhynchos	81.16	9.00e-164	569.00
IUUC-Aca-005042	Anolis carolinensis	81.45	3.00e-164	570.00
IUUC-Aly-006015	Arabidopsis lyrata	41.92	3.00e-69	254.00
IUUC-Ath-007659	Arabidopsis thaliana	41.64	8.00e-69	253.00
IUUC-Ani-009238	Aspergillus nidulans	36.95	8.00e-55	207.00
IUUC-Ate-010406	Aspergillus terreus	37.43	6.00e-55	207.00
IUUC-Ame-011368	Astyanax mexicanus	77.68	6.00e-161	559.00
IUUC-Bta-012856	Bos taurus	84.64	7.00e-171	592.00
IUUC-Bdi-015050	Brachypodium distachyon	46.01	5.00e-60	224.00
IUUC-Bol-015367	Brassica oleracea	42.54	8.00e-66	243.00
IUUC-Bra-016903	Brassica rapa	42.54	8.00e-66	243.00
IUUC-Cel-018563	Caenorhabditis elegans	42.32	1.00e-72	266.00
IUUC-Cja-019700	Callithrix jacchus	85.22	3.00e-171	594.00
IUUC-Cfa-020337	Canis familiaris	84.93	5.00e-171	593.00
IUUC-Cpo-021858	Cavia porcellus	84.35	3.00e-170	590.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	37.74	5.00e-61	227.00
IUUC-Csa-023322	Chlorocebus sabaeus	84.93	1.00e-170	592.00
IUUC-Cho-024533	Choloepus hoffmanni	56.81	1.00e-94	339.00
IUUC-Cin-025393	Ciona intestinalis	60.43	5.00e-128	450.00
IUUC-Csv-026093	Ciona savignyi	60.43	3.00e-126	444.00
IUUC-Dre-028159	Danio rerio	77.97	3.00e-161	560.00
IUUC-Dno-028852	Dasypus novemcinctus	84.93	5.00e-171	593.00
IUUC-Dor-030445	Dipodomys ordii	69.48	5.00e-130	457.00
IUUC-Dme-032009	Drosophila melanogaster	58.00	2.00e-113	401.00
IUUC-Eca-033306	Equus caballus	84.64	3.00e-170	590.00
IUUC-Fca-035579	Felis catus	84.93	5.00e-171	593.00
IUUC-Fal-037582	Ficedula albicollis	81.62	3.00e-165	573.00
IUUC-Gmo-038500	Gadus morhua	76.23	5.00e-158	550.00
IUUC-Gga-040684	Gallus gallus	81.45	7.00e-164	569.00
IUUC-Gac-042592	Gasterosteus aculeatus	76.52	3.00e-158	550.00
IUUC-Gma-043208	Glycine max	43.82	8.00e-70	256.00
IUUC-Ggo-044965	Gorilla gorilla	84.93	1.00e-170	592.00
IUUC-Hsa-046779	Homo sapiens	93.12	4.00e-154	537.00
IUUC-Hvu-047380	Hordeum vulgare	42.17	3.00e-62	231.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	84.64	3.00e-170	590.00
IUUC-Lch-050559	Latimeria chalumnae	73.03	6.00e-139	486.00
IUUC-Lpe-051050	Leersia perrieri	43.10	2.00e-68	252.00
IUUC-Loc-052874	Lepisosteus oculatus	77.68	2.00e-159	555.00
IUUC-Laf-053980	Loxodonta africana	84.64	1.00e-170	592.00
IUUC-Mcc-055408	Macaca mulatta	85.22	2.00e-171	594.00
IUUC-Meu-056551	Macropus eugenii	74.26	7.00e-143	499.00
IUUC-Mtr-057675	Medicago truncatula	42.74	1.00e-69	256.00
IUUC-Mla-059155	Melampsora laricipopulina	42.80	3.00e-63	235.00
IUUC-Mga-060140	Meleagris gallopavo	79.54	1.00e-138	485.00
IUUC-Mvi-060264	Microbotryum violaceum	36.25	2.00e-57	216.00
IUUC-Mmr-061533	Microcebus murinus	84.64	1.00e-170	592.00
IUUC-Mdo-062593	Monodelphis domestica	82.90	5.00e-168	583.00
IUUC-Mmu-063362	Mus musculus	84.93	5.00e-171	593.00
IUUC-Mac-064968	Musa acuminata	39.53	2.00e-58	219.00
IUUC-Mpu-065722	Mustela putorius furo	81.70	1.00e-171	595.00
IUUC-Mlu-068124	Myotis lucifugus	84.64	1.00e-170	592.00
IUUC-Opr-070320	Ochotona princeps	75.94	2.00e-146	511.00
IUUC-Ont-071303	Oreochromis niloticus	77.97	9.00e-161	559.00
IUUC-Oan-073724	Ornithorhynchus anatinus	82.03	2.00e-166	577.00
IUUC-Ocu-074961	Oryctolagus cuniculus	92.39	4.00e-154	537.00
IUUC-Oba-075879	Oryza barthii	48.34	2.00e-67	249.00
IUUC-Obr-076326	Oryza brachyantha	42.82	4.00e-68	251.00
IUUC-Ogl-077767	Oryza glaberrima	43.35	4.00e-68	251.00
IUUC-Ogu-078760	Oryza glumaepatula	41.74	6.00e-65	240.00
IUUC-Oin-080219	Oryza indica	43.35	4.00e-68	251.00
IUUC-Olo-081007	Oryza longistaminata	43.35	4.00e-68	251.00
IUUC-Ome-081848	Oryza meridionalis	46.27	1.00e-63	236.00
IUUC-Oni-082844	Oryza nivara	43.35	4.00e-68	251.00
IUUC-Opu-083511	Oryza punctata	48.92	1.00e-67	249.00
IUUC-Oru-085012	Oryza rufipogon	43.35	4.00e-68	251.00
IUUC-Osa-085287	Oryza sativa	43.35	4.00e-68	251.00
IUUC-Ola-087292	Oryzias latipes	77.39	2.00e-159	555.00
IUUC-Olu-087689	Ostreococcus lucimarinus	41.88	1.00e-67	249.00
IUUC-Oga-088821	Otolemur garnettii	84.93	5.00e-171	593.00
IUUC-Oar-090253	Ovis aries	84.93	5.00e-171	593.00
IUUC-Ptr-091097	Pan troglodytes	83.77	2.00e-168	584.00
IUUC-Pan-091835	Papio anubis	85.22	3.00e-171	594.00
IUUC-Psi-093000	Pelodiscus sinensis	81.50	1.00e-164	572.00
IUUC-Pma-094273	Petromyzon marinus	73.44	2.00e-159	555.00
IUUC-Ppa-095202	Physcomitrella patens	51.15	4.00e-71	260.00
IUUC-Pfo-096388	Poecilia formosa	77.45	7.00e-163	566.00
IUUC-Pab-097533	Pongo abelii	85.22	3.00e-171	594.00
IUUC-Pop-099348	Populus trichocarpa	41.64	2.00e-65	242.00
IUUC-Pca-100638	Procavia capensis	78.38	6.00e-65	240.00
IUUC-Ppe-101817	Prunus persica	43.73	4.00e-68	251.00
IUUC-Pva-102233	Pteropus vampyrus	84.06	7.00e-169	586.00
IUUC-Pgr-103342	Puccinia graminis	41.40	1.00e-63	236.00
IUUC-Ptt-103836	Puccinia triticina	39.94	2.00e-64	239.00
IUUC-Rno-105548	Rattus norvegicus	84.64	6.00e-171	593.00
IUUC-Sha-107617	Sarcophilus harrisii	76.23	2.00e-104	370.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	41.73	5.00e-53	201.00
IUUC-Spo-108293	Schizosaccharomyces pombe	39.39	7.00e-62	230.00
IUUC-Smo-109611	Selaginella moellendorffii	43.27	6.00e-68	250.00
IUUC-Sit-110521	Setaria italica	46.86	2.00e-66	245.00
IUUC-Sly-111037	Solanum lycopersicum	43.54	4.00e-70	258.00
IUUC-Sbi-113852	Sorghum bicolor	46.49	3.00e-66	244.00
IUUC-Sre-114922	Sporisorium reilianum	36.55	3.00e-46	179.00
IUUC-Ssc-116305	Sus scrofa	84.93	8.00e-171	592.00
IUUC-Tgu-116751	Taeniopygia guttata	81.45	2.00e-164	571.00
IUUC-Tru-117798	Takifugu rubripes	77.39	4.00e-159	553.00
IUUC-Tsy-119523	Tarsius syrichta	91.45	9.00e-128	449.00
IUUC-Tni-120477	Tetraodon nigroviridis	77.23	2.00e-157	548.00
IUUC-Tca-121802	Theobroma cacao	44.38	1.00e-69	256.00
IUUC-Tae-125786	Triticum aestivum	41.88	3.00e-61	228.00
IUUC-Tur-126390	Triticum urartu	42.15	2.00e-66	245.00
IUUC-Tme-127152	Tuber melanosporum	39.30	8.00e-53	200.00
IUUC-Tbe-127319	Tupaia belangeri	84.13	8.00e-124	436.00
IUUC-Ttr-129207	Tursiops truncatus	83.72	1.00e-166	578.00
IUUC-Uma-129342	Ustilago maydis	38.43	2.00e-41	162.00
IUUC-Vpa-130076	Vicugna pacos	81.88	7.00e-133	466.00
IUUC-Vvi-131104	Vitis vinifera	42.98	3.00e-69	254.00
IUUC-Xtr-132917	Xenopus tropicalis	60.06	5.00e-107	380.00
IUUC-Xma-133615	Xiphophorus maculatus	77.97	3.00e-161	560.00
IUUC-Zma-135606	Zea mays	46.38	4.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence