iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015373

Ensembl Protein ID

Bo8g001270.1

UniProt Accession

A0A0D3DIL9; A0A0D3DIL9_BRAOL

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g001270	Bo8g001270.1	Bo8g001270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-14	54.3	775	817

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt+ vtc+ f      + ++l sGs+D ++++WD+++g ll 
   Q: 775  GHTEFVTCITFvqnselTQGYLMSGSGDSSVRLWDITSGSLLD 817
           8************97743399*****************99875 PP

Organism

Brassica oleracea

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MGSSKLKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEYPAE EKYIREILSL 60
TSYSRNYINA CVNTLSKRLN KTKCWTVALK TLILIQRLLA EGDKAYEQEI FFATRRGTRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTCGA GTAAGCTCAA ACGAGCCATA GGCGCCGTGA AGGACCAAAC CAGCGTCGGT 60
CTAGCCAAAG TCAACGGTCG TAGCGCTTCT TTATCAGAGC TTGACGTAGC CATCGTCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR011417--ANTH_dom
IPR014712--Clathrin_AP_2
IPR013809--ENTH
IPR008942--ENTH_VHS
IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50942--ENTH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07651--ANTH
PF00400--WD40

SMART

SM00273--ENTH
SM00320--WD40

Gene Ontology

GO:0030136--C:clathrin-coated vesicle
GO:0005634--C:nucleus
GO:0005545--F:1-phosphatidylinositol binding
GO:0048268--P:clathrin coat assembly
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	51.34	2.00e-95	342.00
IUUC-Aly-005769	Arabidopsis lyrata	81.93	0.00e+00	656.00
IUUC-Ath-006733	Arabidopsis thaliana	81.64	0.00e+00	639.00
IUUC-Afl-008518	Aspergillus flavus	30.28	2.00e-15	76.30
IUUC-Aor-010133	Aspergillus oryzae	27.27	3.00e-16	79.70
IUUC-Ame-010613	Astyanax mexicanus	31.60	8.00e-26	111.00
IUUC-Bgr-012067	Blumeria graminis	29.63	6.00e-12	65.50
IUUC-Bdi-014458	Brachypodium distachyon	53.73	2.00e-104	372.00
IUUC-Bra-017059	Brassica rapa	94.09	0.00e+00	708.00
IUUC-Csa-024148	Chlorocebus sabaeus	36.07	5.00e-17	82.00
IUUC-Cne-026834	Cryptococcus neoformans	27.36	2.00e-14	74.30
IUUC-Ggo-045340	Gorilla gorilla	35.52	7.00e-16	78.20
IUUC-Hsa-046403	Homo sapiens	35.87	3.00e-17	82.80
IUUC-Hvu-047643	Hordeum vulgare	52.42	8.00e-108	383.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	31.44	8.00e-27	114.00
IUUC-Kpa-049283	Komagataella pastoris	28.57	2.00e-16	79.70
IUUC-Mcc-054747	Macaca mulatta	36.07	3.00e-17	82.80
IUUC-Mla-059135	Melampsora laricipopulina	27.20	6.00e-19	89.00
IUUC-Mmr-061518	Microcebus murinus	33.48	2.00e-22	100.00
IUUC-Mac-065625	Musa acuminata	53.47	2.00e-112	399.00
IUUC-Nle-069914	Nomascus leucogenys	33.70	1.00e-13	70.50
IUUC-Oan-072951	Ornithorhynchus anatinus	37.70	2.00e-26	112.00
IUUC-Ocu-074679	Oryctolagus cuniculus	37.84	9.00e-19	87.80
IUUC-Opu-084031	Oryza punctata	53.48	9.00e-116	410.00
IUUC-Ptr-090851	Pan troglodytes	35.33	6.00e-16	78.60
IUUC-Pan-092558	Papio anubis	36.07	4.00e-17	82.00
IUUC-Pab-097722	Pongo abelii	35.33	2.00e-17	83.60
IUUC-Smo-108938	Selaginella moellendorffii	39.81	3.00e-69	255.00
IUUC-Stu-111925	Solanum tuberosum	58.89	3.00e-136	478.00
IUUC-Tae-124459	Triticum aestivum	54.11	3.00e-112	398.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence