iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107912

Ensembl Protein ID

EEB07117

UniProt Accession

B6K1T6; B6K1T6_SCHJY

Genbank Protein ID

EEB07117.1

Protein Name

CAF assembly factor complex subunit B

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02198

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02198	EEB07117	EEB07117

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-17	61.2	132	164

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++l++ +d +++v+Gs D+ +++++  tg llk
   Q: 132  YDLSWsPDgNYIVTGSMDNILRIYNANTGQLLK 164
           6899**999****************99998876 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MLSEVLQIRW HYDADNDYTP IYSADFQHSG RIATCGGDNN IRIWRLYREK ESCSPKVEYL 60
STLSRHLQAV NVVRFDPTGE RLASAGDEGI VFIWVPSDKP INTISTNNED MEIAKEFWRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAGAAGAAT AGAAAAGATC CTTCTAAATA CTCCAATTAT CAGTGATAGT AAATCAATAC 60
GTATATGCAA CAGTAAACGG CTGGTTTTTC CTAAATAATA AAAATAAAAA CTGTTTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0000775--C:chromosome, centromeric region
GO:0005829--C:cytosol
GO:0043596--C:nuclear replication fork
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0070829--P:heterochromatin maintenance
GO:1990426--P:mitotic recombination-dependent replication fork processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	37.71	6.00e-71	259.00
IUUC-Aml-001755	Ailuropoda melanoleuca	35.43	9.00e-73	265.00
IUUC-Atr-002674	Amborella trichopoda	35.80	1.00e-70	258.00
IUUC-Apl-003701	Anas platyrhynchos	35.37	5.00e-74	269.00
IUUC-Aca-004692	Anolis carolinensis	35.22	5.00e-77	280.00
IUUC-Aly-006286	Arabidopsis lyrata	33.69	7.00e-70	256.00
IUUC-Ath-007683	Arabidopsis thaliana	35.11	1.00e-70	258.00
IUUC-Ago-007940	Ashbya gossypii	40.69	5.00e-79	286.00
IUUC-Acl-008070	Aspergillus clavatus	50.88	1.00e-61	229.00
IUUC-Afl-008414	Aspergillus flavus	49.59	9.00e-62	229.00
IUUC-Afu-009046	Aspergillus fumigatus	42.24	2.00e-24	105.00
IUUC-Ani-009399	Aspergillus nidulans	50.88	1.00e-60	225.00
IUUC-Ang-009650	Aspergillus niger	48.51	5.00e-59	220.00
IUUC-Aor-009937	Aspergillus oryzae	51.33	1.00e-61	229.00
IUUC-Ate-010505	Aspergillus terreus	43.81	4.00e-42	163.00
IUUC-Ame-011094	Astyanax mexicanus	34.22	3.00e-74	270.00
IUUC-Bgr-012005	Blumeria graminis	41.37	8.00e-54	202.00
IUUC-Bta-013423	Bos taurus	33.80	2.00e-72	265.00
IUUC-Bci-013847	Botrytis cinerea	50.75	5.00e-58	217.00
IUUC-Bdi-014860	Brachypodium distachyon	36.52	1.00e-64	238.00
IUUC-Bol-016603	Brassica oleracea	32.99	4.00e-69	253.00
IUUC-Bra-017175	Brassica rapa	34.68	7.00e-65	239.00
IUUC-Cel-018272	Caenorhabditis elegans	29.64	8.00e-36	142.00
IUUC-Cja-019558	Callithrix jacchus	36.97	6.00e-76	276.00
IUUC-Cfa-020900	Canis familiaris	34.71	1.00e-72	265.00
IUUC-Cpo-022054	Cavia porcellus	34.18	6.00e-63	233.00
IUUC-Csa-023850	Chlorocebus sabaeus	36.75	5.00e-77	279.00
IUUC-Cho-024510	Choloepus hoffmanni	25.75	1.00e-25	108.00
IUUC-Cin-025178	Ciona intestinalis	36.45	5.00e-68	249.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	49.74	7.00e-52	196.00
IUUC-Cne-027015	Cryptococcus neoformans	46.15	3.00e-46	178.00
IUUC-Cme-027136	Cyanidioschyzon merolae	30.47	9.00e-55	205.00
IUUC-Dre-027879	Danio rerio	34.12	4.00e-75	273.00
IUUC-Dno-029335	Dasypus novemcinctus	34.87	1.00e-74	272.00
IUUC-Dor-030520	Dipodomys ordii	41.92	2.00e-36	144.00
IUUC-Dse-031566	Dothistroma septosporum	48.68	5.00e-58	217.00
IUUC-Dme-031838	Drosophila melanogaster	37.26	8.00e-74	269.00
IUUC-Eca-033563	Equus caballus	36.75	5.00e-76	276.00
IUUC-Fca-036052	Felis catus	35.21	3.00e-73	267.00
IUUC-Fal-037080	Ficedula albicollis	34.32	7.00e-74	269.00
IUUC-Fox-038022	Fusarium oxysporum	54.73	5.00e-60	223.00
IUUC-Fso-038115	Fusarium solani	52.74	6.00e-59	220.00
IUUC-Gmo-039461	Gadus morhua	34.81	6.00e-51	192.00
IUUC-Ggr-040100	Gaeumannomyces graminis	52.22	4.00e-57	214.00
IUUC-Gga-041133	Gallus gallus	36.32	6.00e-76	276.00
IUUC-Gac-041769	Gasterosteus aculeatus	34.38	9.00e-73	265.00
IUUC-Gma-043070	Glycine max	38.26	5.00e-74	270.00
IUUC-Ggo-044561	Gorilla gorilla	37.47	1.00e-77	281.00
IUUC-Hsa-046150	Homo sapiens	37.47	2.00e-77	281.00
IUUC-Hvu-047792	Hordeum vulgare	36.13	8.00e-42	161.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	35.92	4.00e-74	270.00
IUUC-Kpa-049397	Komagataella pastoris	43.65	1.00e-97	348.00
IUUC-Lch-050365	Latimeria chalumnae	26.65	2.00e-43	167.00
IUUC-Lpe-050875	Leersia perrieri	36.52	7.00e-69	252.00
IUUC-Loc-052770	Lepisosteus oculatus	34.99	9.00e-73	265.00
IUUC-Lma-053291	Leptosphaeria maculans	47.79	4.00e-59	221.00
IUUC-Laf-053505	Loxodonta africana	34.58	3.00e-75	273.00
IUUC-Mcc-054803	Macaca mulatta	36.75	5.00e-77	280.00
IUUC-Meu-056578	Macropus eugenii	37.50	2.00e-35	141.00
IUUC-Mor-057211	Magnaporthe oryzae	49.25	2.00e-55	208.00
IUUC-Mpo-057411	Magnaporthe poae	50.75	4.00e-56	210.00
IUUC-Mtr-058066	Medicago truncatula	38.72	9.00e-74	269.00
IUUC-Mga-059735	Meleagris gallopavo	36.32	1.00e-75	275.00
IUUC-Mvi-060288	Microbotryum violaceum	33.56	3.00e-42	165.00
IUUC-Mmr-061343	Microcebus murinus	36.99	6.00e-76	276.00
IUUC-Mdo-062065	Monodelphis domestica	36.58	9.00e-76	275.00
IUUC-Mmu-063501	Mus musculus	36.38	4.00e-77	280.00
IUUC-Mac-064864	Musa acuminata	35.08	2.00e-69	254.00
IUUC-Mpu-066549	Mustela putorius furo	34.89	2.00e-72	265.00
IUUC-Mlu-067121	Myotis lucifugus	34.20	6.00e-74	269.00
IUUC-Nfi-068462	Neosartorya fischeri	50.44	5.00e-61	227.00
IUUC-Ncr-068838	Neurospora crassa	52.24	1.00e-58	219.00
IUUC-Nle-069854	Nomascus leucogenys	37.23	1.00e-76	278.00
IUUC-Opr-070803	Ochotona princeps	35.08	2.00e-69	254.00
IUUC-Ont-071642	Oreochromis niloticus	36.32	3.00e-75	273.00
IUUC-Oan-073675	Ornithorhynchus anatinus	35.44	5.00e-75	273.00
IUUC-Ocu-073863	Oryctolagus cuniculus	36.21	1.00e-73	268.00
IUUC-Oba-075682	Oryza barthii	35.32	5.00e-63	233.00
IUUC-Obr-076039	Oryza brachyantha	36.58	2.00e-68	251.00
IUUC-Ogu-078021	Oryza glumaepatula	36.75	6.00e-68	249.00
IUUC-Oin-079908	Oryza indica	32.38	2.00e-51	194.00
IUUC-Olo-081063	Oryza longistaminata	36.75	5.00e-68	249.00
IUUC-Ome-081930	Oryza meridionalis	36.52	2.00e-67	248.00
IUUC-Oni-082547	Oryza nivara	36.75	8.00e-68	248.00
IUUC-Opu-084089	Oryza punctata	36.04	2.00e-65	241.00
IUUC-Oru-084844	Oryza rufipogon	36.75	7.00e-68	249.00
IUUC-Osa-085582	Oryza sativa	36.75	7.00e-68	249.00
IUUC-Ola-087187	Oryzias latipes	36.85	8.00e-71	259.00
IUUC-Olu-087792	Ostreococcus lucimarinus	31.49	2.00e-64	237.00
IUUC-Oga-088390	Otolemur garnettii	35.56	1.00e-75	275.00
IUUC-Oar-089740	Ovis aries	33.96	1.00e-68	252.00
IUUC-Ptr-091581	Pan troglodytes	37.47	2.00e-77	281.00
IUUC-Pan-092258	Papio anubis	32.39	3.00e-60	224.00
IUUC-Psi-093761	Pelodiscus sinensis	35.61	5.00e-77	280.00
IUUC-Pno-094957	Phaeosphaeria nodorum	39.17	2.00e-46	177.00
IUUC-Ppa-095428	Physcomitrella patens	36.27	1.00e-79	288.00
IUUC-Pfo-097357	Poecilia formosa	34.94	1.00e-72	265.00
IUUC-Pab-098520	Pongo abelii	37.23	2.00e-76	278.00
IUUC-Pop-099331	Populus trichocarpa	36.34	3.00e-70	256.00
IUUC-Ppe-101548	Prunus persica	35.55	1.00e-69	255.00
IUUC-Pva-103243	Pteropus vampyrus	36.51	3.00e-69	253.00
IUUC-Pgr-103591	Puccinia graminis	32.53	4.00e-39	154.00
IUUC-Pte-104247	Pyrenophora teres	48.23	1.00e-59	222.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	48.23	1.00e-59	222.00
IUUC-Rno-105202	Rattus norvegicus	36.38	1.00e-76	278.00
IUUC-Sce-106250	Saccharomyces cerevisiae	36.98	3.00e-82	296.00
IUUC-Sha-107036	Sarcophilus harrisii	35.48	1.00e-75	275.00
IUUC-Spo-108050	Schizosaccharomyces pombe	47.76	2.00e-122	430.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	51.24	4.00e-58	217.00
IUUC-Sit-109838	Setaria italica	35.04	3.00e-69	253.00
IUUC-Sly-110872	Solanum lycopersicum	35.71	7.00e-73	265.00
IUUC-Stu-111933	Solanum tuberosum	35.85	6.00e-74	269.00
IUUC-Sbi-114587	Sorghum bicolor	33.12	3.00e-67	247.00
IUUC-Sre-115093	Sporisorium reilianum	43.30	2.00e-45	175.00
IUUC-Ssc-115462	Sus scrofa	37.05	6.00e-76	276.00
IUUC-Tgu-117186	Taeniopygia guttata	34.71	9.00e-74	269.00
IUUC-Tru-118310	Takifugu rubripes	34.52	8.00e-74	269.00
IUUC-Tsy-118927	Tarsius syrichta	41.60	4.00e-26	110.00
IUUC-Tni-120832	Tetraodon nigroviridis	35.05	4.00e-71	260.00
IUUC-Tca-121584	Theobroma cacao	35.25	6.00e-71	259.00
IUUC-Tre-122140	Trichoderma reesei	50.00	3.00e-58	218.00
IUUC-Tvi-122663	Trichoderma virens	49.55	5.00e-58	216.00
IUUC-Tae-124502	Triticum aestivum	35.85	3.00e-71	260.00
IUUC-Tur-126239	Triticum urartu	37.95	5.00e-71	259.00
IUUC-Tme-127108	Tuber melanosporum	43.16	4.00e-96	343.00
IUUC-Ttr-129010	Tursiops truncatus	35.32	6.00e-75	273.00
IUUC-Uma-129499	Ustilago maydis	43.01	3.00e-44	171.00
IUUC-Vda-129825	Verticillium dahliae	50.45	9.00e-60	223.00
IUUC-Vpa-130374	Vicugna pacos	37.75	3.00e-26	110.00
IUUC-Vvi-131136	Vitis vinifera	36.15	2.00e-69	254.00
IUUC-Xtr-132141	Xenopus tropicalis	35.90	2.00e-75	274.00
IUUC-Xma-133980	Xiphophorus maculatus	35.63	9.00e-72	262.00
IUUC-Yli-134457	Yarrowia lipolytica	43.33	9.00e-50	189.00
IUUC-Zma-135321	Zea mays	35.31	6.00e-69	252.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence