iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076480

Ensembl Protein ID

OB10G19940.1

UniProt Accession

J3N396; J3N396_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB10G19940	OB10G19940.1	OB10G19940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-25	86.4	261	291
E3 activity/RING/U-box	1.30e-14	54.7	1	68
UBD/Beta-Prp	9.10e-51	173.5	216	430

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ ++t+l+f   d l+v+Gs D+t+++W 
   Q: 261  GHSKKITSLKFvpRDELFVTGSADKTVRIWQ 291
           8***********877***************5 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           ++C+Is+e++ +Pvv++ sG  ++r+ +e+++++ gk cPvt+++lt +d+vP +t + +  + +++ s
   Q: 1    MICAISGEVPDEPVVSKkSGLLFERRLVERYIEDHGK-CPVTKEELTMDDIVPVKTNKVVKPRPLQAAS 68
           58**********************************9.********************99998888765 PP

UBD/Beta-Prp

   S: 48   l.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle...tgqcleetlsghdgvv 140
           l + +++++ +++++p+++i++tg+ D ++ ++d  +g+++ tl+gh+++++sl+f p ++ +v+Gs+d+t+r+w+ +   ++ c++ tl+ h++ v
   Q: 216  LhKTNKPGILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVRIWQGSeegNYNCIH-TLKDHTAEV 311
           446788899999999999999999999999999999999999999999999999999999999999999999998665111557777.999999999 PP
   S: 141  ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnder 236
             v+vh +++++v++s+D+t  ++d++tg++l++  +   ++  +s sf+++g  l +g +   vk+wd++t++ v +++gh  +v+ + fs+n+ +
   Q: 312  EAVTVHATQKYFVTASKDNTWCFYDISTGSCLTQVgEASGEEGYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYF 408
           9999999999999999999999999999999999973335677788889999999999999999999999999999999999999999999999999 PP
   S: 237  lvsgssDgsiriWdlrsgdllkt 259
           l++++ Dg +++Wdlr+  + +t
   Q: 409  LATAALDG-VKLWDLRKLRNFRT 430
           99998886.79999998766655 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MICAISGEVP DEPVVSKKSG LLFERRLVER YIEDHGKCPV TKEELTMDDI VPVKTNKVVK 60
PRPLQAASIP GLLGMFQNEW DALMLSSFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTTCCTG TCGCCGTCGC CGCCATGATC TGCGCAAGTA AGCTTCTAAA CTGTCTTGGC 60
GCTCTCACTT CTCCCCCGAA ATCCTAGCTT CTAAACTGCC CTGCCTCTGG TTTGAAGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102716627

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	81.01	0.00e+00	879.00
IUUC-Aml-001230	Ailuropoda melanoleuca	44.14	7.00e-112	396.00
IUUC-Atr-002594	Amborella trichopoda	75.95	0.00e+00	831.00
IUUC-Apl-003686	Anas platyrhynchos	42.99	2.00e-86	311.00
IUUC-Aca-005272	Anolis carolinensis	45.11	5.00e-118	417.00
IUUC-Aly-005586	Arabidopsis lyrata	72.97	0.00e+00	791.00
IUUC-Ath-007693	Arabidopsis thaliana	72.06	0.00e+00	780.00
IUUC-Ago-007879	Ashbya gossypii	43.40	3.00e-29	122.00
IUUC-Acl-008335	Aspergillus clavatus	32.46	9.00e-61	226.00
IUUC-Afl-008527	Aspergillus flavus	34.24	1.00e-68	252.00
IUUC-Afu-008957	Aspergillus fumigatus	33.20	4.00e-71	261.00
IUUC-Ani-009280	Aspergillus nidulans	35.01	2.00e-64	239.00
IUUC-Ang-009746	Aspergillus niger	34.73	9.00e-70	256.00
IUUC-Aor-009905	Aspergillus oryzae	34.04	3.00e-70	258.00
IUUC-Ate-010412	Aspergillus terreus	34.45	4.00e-64	238.00
IUUC-Ame-011561	Astyanax mexicanus	42.29	8.00e-43	166.00
IUUC-Bgr-012283	Blumeria graminis	30.74	2.00e-50	192.00
IUUC-Bta-013242	Bos taurus	44.91	3.00e-118	417.00
IUUC-Bci-013901	Botrytis cinerea	34.11	1.00e-66	246.00
IUUC-Bdi-014277	Brachypodium distachyon	89.94	0.00e+00	1001.00
IUUC-Bol-016207	Brassica oleracea	71.07	0.00e+00	773.00
IUUC-Bra-017902	Brassica rapa	71.95	0.00e+00	770.00
IUUC-Cel-018271	Caenorhabditis elegans	39.19	6.00e-104	370.00
IUUC-Cja-019879	Callithrix jacchus	44.64	1.00e-116	412.00
IUUC-Cfa-020175	Canis familiaris	44.49	1.00e-117	415.00
IUUC-Cpo-022379	Cavia porcellus	44.72	7.00e-118	416.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	48.55	4.00e-134	470.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.72	6.00e-118	416.00
IUUC-Cho-025065	Choloepus hoffmanni	36.68	2.00e-44	172.00
IUUC-Cin-025699	Ciona intestinalis	45.84	9.00e-104	369.00
IUUC-Csv-026128	Ciona savignyi	44.47	1.00e-115	409.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	33.40	6.00e-68	250.00
IUUC-Cne-026860	Cryptococcus neoformans	37.71	4.00e-93	334.00
IUUC-Dre-028187	Danio rerio	44.49	2.00e-116	411.00
IUUC-Dno-029453	Dasypus novemcinctus	44.72	7.00e-118	416.00
IUUC-Dor-030150	Dipodomys ordii	44.40	1.00e-42	166.00
IUUC-Dse-031220	Dothistroma septosporum	33.20	7.00e-67	247.00
IUUC-Dme-031906	Drosophila melanogaster	44.49	1.00e-110	392.00
IUUC-Ete-033035	Echinops telfairi	44.12	4.00e-55	207.00
IUUC-Eca-033478	Equus caballus	44.91	4.00e-118	417.00
IUUC-Eeu-034974	Erinaceus europaeus	45.51	4.00e-78	284.00
IUUC-Fca-036194	Felis catus	43.91	2.00e-115	408.00
IUUC-Fal-037417	Ficedula albicollis	45.11	6.00e-119	420.00
IUUC-Fox-037922	Fusarium oxysporum	33.73	3.00e-68	251.00
IUUC-Fso-038256	Fusarium solani	33.07	5.00e-71	260.00
IUUC-Gmo-038713	Gadus morhua	44.49	3.00e-117	414.00
IUUC-Ggr-039854	Gaeumannomyces graminis	33.21	2.00e-59	223.00
IUUC-Gga-041143	Gallus gallus	44.91	2.00e-118	417.00
IUUC-Gac-042129	Gasterosteus aculeatus	45.37	4.00e-119	420.00
IUUC-Gma-043635	Glycine max	75.77	0.00e+00	837.00
IUUC-Ggo-045262	Gorilla gorilla	44.72	6.00e-118	416.00
IUUC-Hsa-046036	Homo sapiens	44.72	6.00e-118	416.00
IUUC-Hvu-047442	Hordeum vulgare	92.60	2.00e-175	607.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.29	1.00e-115	409.00
IUUC-Kpa-049195	Komagataella pastoris	45.67	4.00e-22	98.20
IUUC-Lch-050105	Latimeria chalumnae	43.19	6.00e-114	403.00
IUUC-Lpe-050976	Leersia perrieri	95.07	0.00e+00	1016.00
IUUC-Loc-052042	Lepisosteus oculatus	40.91	2.00e-83	301.00
IUUC-Lma-053143	Leptosphaeria maculans	33.91	7.00e-65	241.00
IUUC-Laf-053451	Loxodonta africana	43.12	2.00e-114	405.00
IUUC-Mcc-055786	Macaca mulatta	44.72	6.00e-118	416.00
IUUC-Meu-056161	Macropus eugenii	43.53	1.00e-51	196.00
IUUC-Mor-057215	Magnaporthe oryzae	32.69	2.00e-62	232.00
IUUC-Mpo-057419	Magnaporthe poae	32.63	7.00e-58	217.00
IUUC-Mtr-057756	Medicago truncatula	74.56	0.00e+00	808.00
IUUC-Mla-059085	Melampsora laricipopulina	36.19	4.00e-81	294.00
IUUC-Mga-060158	Meleagris gallopavo	43.78	2.00e-102	364.00
IUUC-Mvi-060441	Microbotryum violaceum	36.09	8.00e-73	266.00
IUUC-Mmr-061085	Microcebus murinus	44.72	6.00e-118	416.00
IUUC-Mdo-061804	Monodelphis domestica	44.72	6.00e-118	416.00
IUUC-Mmu-063608	Mus musculus	43.15	1.00e-114	405.00
IUUC-Mac-064972	Musa acuminata	83.04	0.00e+00	907.00
IUUC-Mpu-065700	Mustela putorius furo	44.49	2.00e-117	415.00
IUUC-Mlu-068223	Myotis lucifugus	43.10	4.00e-115	407.00
IUUC-Nfi-068504	Neosartorya fischeri	34.23	1.00e-70	259.00
IUUC-Ncr-068729	Neurospora crassa	32.21	2.00e-61	229.00
IUUC-Nle-069754	Nomascus leucogenys	44.72	6.00e-118	416.00
IUUC-Opr-070621	Ochotona princeps	45.92	4.00e-109	387.00
IUUC-Ont-071377	Oreochromis niloticus	45.26	7.00e-117	413.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.13	4.00e-36	144.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.99	3.00e-114	404.00
IUUC-Oba-075509	Oryza barthii	96.39	0.00e+00	1063.00
IUUC-Ogl-077052	Oryza glaberrima	96.39	0.00e+00	1065.00
IUUC-Ogu-078919	Oryza glumaepatula	96.02	0.00e+00	1062.00
IUUC-Oin-079357	Oryza indica	91.65	0.00e+00	995.00
IUUC-Olo-080376	Oryza longistaminata	95.96	0.00e+00	998.00
IUUC-Ome-081973	Oryza meridionalis	95.76	0.00e+00	998.00
IUUC-Oni-082849	Oryza nivara	96.02	0.00e+00	1061.00
IUUC-Opu-083243	Oryza punctata	96.58	0.00e+00	1065.00
IUUC-Oru-084613	Oryza rufipogon	96.20	0.00e+00	1063.00
IUUC-Osa-085407	Oryza sativa	96.20	0.00e+00	1062.00
IUUC-Ola-086566	Oryzias latipes	44.42	4.00e-116	410.00
IUUC-Olu-087757	Ostreococcus lucimarinus	44.83	3.00e-116	410.00
IUUC-Oga-089010	Otolemur garnettii	43.49	5.00e-111	393.00
IUUC-Oar-089638	Ovis aries	44.91	3.00e-118	417.00
IUUC-Ptr-091141	Pan troglodytes	44.72	6.00e-118	416.00
IUUC-Pan-092662	Papio anubis	44.72	6.00e-118	416.00
IUUC-Psi-093777	Pelodiscus sinensis	44.52	8.00e-92	329.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.93	2.00e-66	246.00
IUUC-Ppa-095924	Physcomitrella patens	69.25	0.00e+00	759.00
IUUC-Pfo-096390	Poecilia formosa	45.65	3.00e-118	417.00
IUUC-Pab-098250	Pongo abelii	44.83	4.00e-112	397.00
IUUC-Pop-099854	Populus trichocarpa	75.34	0.00e+00	835.00
IUUC-Pca-100553	Procavia capensis	44.72	4.00e-116	410.00
IUUC-Ppe-101383	Prunus persica	73.70	0.00e+00	811.00
IUUC-Pva-102189	Pteropus vampyrus	44.91	2.00e-118	418.00
IUUC-Pgr-103304	Puccinia graminis	35.91	2.00e-78	285.00
IUUC-Ptt-103984	Puccinia triticina	34.99	8.00e-79	286.00
IUUC-Pte-104385	Pyrenophora teres	32.63	1.00e-63	236.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	32.85	4.00e-63	234.00
IUUC-Rno-105581	Rattus norvegicus	44.72	6.00e-118	416.00
IUUC-Sce-106147	Saccharomyces cerevisiae	39.73	5.00e-24	104.00
IUUC-Sha-107071	Sarcophilus harrisii	42.73	9.00e-114	402.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	30.17	7.00e-47	180.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.58	1.00e-43	170.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	33.91	2.00e-63	235.00
IUUC-Smo-109648	Selaginella moellendorffii	66.47	0.00e+00	735.00
IUUC-Sit-109873	Setaria italica	92.53	0.00e+00	991.00
IUUC-Sly-111673	Solanum lycopersicum	75.63	0.00e+00	809.00
IUUC-Stu-112125	Solanum tuberosum	75.24	0.00e+00	809.00
IUUC-Sbi-114696	Sorghum bicolor	84.23	0.00e+00	872.00
IUUC-Sre-115134	Sporisorium reilianum	33.10	4.00e-80	291.00
IUUC-Ssc-116260	Sus scrofa	44.91	2.00e-118	418.00
IUUC-Tgu-116533	Taeniopygia guttata	44.91	2.00e-118	418.00
IUUC-Tru-117800	Takifugu rubripes	45.11	2.00e-119	422.00
IUUC-Tsy-118980	Tarsius syrichta	42.24	4.00e-102	364.00
IUUC-Tni-120334	Tetraodon nigroviridis	44.61	8.00e-79	286.00
IUUC-Tca-121807	Theobroma cacao	74.95	0.00e+00	819.00
IUUC-Tre-121920	Trichoderma reesei	32.25	2.00e-62	232.00
IUUC-Tvi-122294	Trichoderma virens	31.29	4.00e-54	204.00
IUUC-Tae-125713	Triticum aestivum	90.89	0.00e+00	1012.00
IUUC-Tur-126664	Triticum urartu	80.94	0.00e+00	959.00
IUUC-Tme-127026	Tuber melanosporum	36.36	2.00e-75	275.00
IUUC-Tbe-127582	Tupaia belangeri	44.84	6.00e-78	283.00
IUUC-Ttr-128313	Tursiops truncatus	45.11	3.00e-117	414.00
IUUC-Uma-129626	Ustilago maydis	34.73	2.00e-80	292.00
IUUC-Vda-129699	Verticillium dahliae	33.47	1.00e-61	229.00
IUUC-Vpa-130593	Vicugna pacos	45.92	7.00e-109	386.00
IUUC-Vvi-131668	Vitis vinifera	77.20	0.00e+00	861.00
IUUC-Xtr-132186	Xenopus tropicalis	46.33	4.00e-102	363.00
IUUC-Xma-133212	Xiphophorus maculatus	45.45	8.00e-118	416.00
IUUC-Yli-134607	Yarrowia lipolytica	55.73	1.00e-39	154.00
IUUC-Zma-135662	Zea mays	90.89	0.00e+00	990.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence