iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019899

Ensembl Protein ID

ENSCJAP00000029194.2

UniProt Accession

F7I384; F7I384_CALJA

Genbank Protein ID

ENSCJAP00000029194

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01126939

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000015849.2	ENSCJAT00000030849.2	ENSCJAP00000029194.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-17	61.6	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGT KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGRTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGAGGAAG TGGCTGCGGC TGCCGCGCGG GGCCCAGAGT CGGTTCGGCG CGTCGACTGC 60
CCAGAGTCCG CGGCCGGGGC GCGGGAGGTG AGGGCCGCGG GGGCGCACGG AGGAGGGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.04	7.00e-63	234.00
IUUC-Aml-001709	Ailuropoda melanoleuca	95.49	0.00e+00	723.00
IUUC-Ame-011512	Astyanax mexicanus	80.38	0.00e+00	649.00
IUUC-Bta-012442	Bos taurus	94.89	0.00e+00	716.00
IUUC-Cfa-020067	Canis familiaris	95.98	0.00e+00	723.00
IUUC-Cpo-022461	Cavia porcellus	97.05	0.00e+00	729.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.03	5.00e-34	137.00
IUUC-Csa-023277	Chlorocebus sabaeus	88.74	0.00e+00	683.00
IUUC-Dre-028141	Danio rerio	80.11	0.00e+00	641.00
IUUC-Dor-030559	Dipodomys ordii	95.44	0.00e+00	730.00
IUUC-Ete-032299	Echinops telfairi	93.30	0.00e+00	731.00
IUUC-Eca-033593	Equus caballus	95.19	0.00e+00	721.00
IUUC-Fca-036254	Felis catus	96.78	0.00e+00	729.00
IUUC-Fal-037453	Ficedula albicollis	87.73	0.00e+00	689.00
IUUC-Gmo-038471	Gadus morhua	69.60	2.00e-161	561.00
IUUC-Gga-040898	Gallus gallus	87.67	0.00e+00	692.00
IUUC-Gac-042236	Gasterosteus aculeatus	74.61	4.00e-176	610.00
IUUC-Ggo-045355	Gorilla gorilla	81.77	2.00e-169	587.00
IUUC-Hsa-046623	Homo sapiens	97.86	0.00e+00	735.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	96.25	0.00e+00	736.00
IUUC-Lch-049679	Latimeria chalumnae	79.57	0.00e+00	637.00
IUUC-Lpe-050869	Leersia perrieri	41.39	1.00e-76	280.00
IUUC-Loc-052140	Lepisosteus oculatus	80.65	0.00e+00	630.00
IUUC-Laf-054287	Loxodonta africana	92.57	0.00e+00	689.00
IUUC-Meu-056302	Macropus eugenii	90.08	0.00e+00	706.00
IUUC-Mga-059279	Meleagris gallopavo	87.67	0.00e+00	693.00
IUUC-Mmr-060752	Microcebus murinus	95.86	0.00e+00	717.00
IUUC-Mdo-062836	Monodelphis domestica	86.06	0.00e+00	666.00
IUUC-Mmu-064099	Mus musculus	94.69	0.00e+00	719.00
IUUC-Mpu-066247	Mustela putorius furo	95.98	0.00e+00	709.00
IUUC-Mlu-067571	Myotis lucifugus	95.71	0.00e+00	740.00
IUUC-Nle-069492	Nomascus leucogenys	84.18	1.00e-171	595.00
IUUC-Ont-071316	Oreochromis niloticus	76.44	1.00e-175	608.00
IUUC-Oan-072692	Ornithorhynchus anatinus	88.47	0.00e+00	692.00
IUUC-Ocu-074187	Oryctolagus cuniculus	92.23	0.00e+00	706.00
IUUC-Oba-075379	Oryza barthii	41.53	3.00e-77	282.00
IUUC-Obr-076404	Oryza brachyantha	41.92	7.00e-78	284.00
IUUC-Ogl-077409	Oryza glaberrima	39.13	3.00e-71	262.00
IUUC-Ogu-078759	Oryza glumaepatula	41.53	3.00e-77	282.00
IUUC-Oin-079118	Oryza indica	41.58	4.00e-78	284.00
IUUC-Olo-081055	Oryza longistaminata	40.91	7.00e-68	250.00
IUUC-Ome-081281	Oryza meridionalis	41.53	3.00e-77	282.00
IUUC-Oni-083043	Oryza nivara	41.53	3.00e-77	282.00
IUUC-Oru-084839	Oryza rufipogon	41.53	3.00e-77	282.00
IUUC-Osa-085377	Oryza sativa	41.58	6.00e-78	284.00
IUUC-Oga-088610	Otolemur garnettii	96.78	0.00e+00	733.00
IUUC-Oar-089639	Ovis aries	93.55	0.00e+00	699.00
IUUC-Ptr-091023	Pan troglodytes	97.59	0.00e+00	733.00
IUUC-Pan-091727	Papio anubis	97.32	0.00e+00	740.00
IUUC-Pfo-097058	Poecilia formosa	74.35	3.00e-175	607.00
IUUC-Pab-098238	Pongo abelii	97.59	0.00e+00	738.00
IUUC-Pca-100580	Procavia capensis	93.83	0.00e+00	703.00
IUUC-Ppe-101681	Prunus persica	41.58	1.00e-79	290.00
IUUC-Pva-102928	Pteropus vampyrus	93.03	0.00e+00	692.00
IUUC-Rno-104846	Rattus norvegicus	95.71	0.00e+00	726.00
IUUC-Sly-111048	Solanum lycopersicum	42.20	6.00e-77	281.00
IUUC-Sar-113404	Sorex araneus	78.06	5.00e-156	543.00
IUUC-Sbi-114685	Sorghum bicolor	41.42	1.00e-76	280.00
IUUC-Tru-118106	Takifugu rubripes	74.02	2.00e-176	611.00
IUUC-Tni-120079	Tetraodon nigroviridis	75.33	4.00e-178	617.00
IUUC-Tur-126640	Triticum urartu	39.39	1.00e-67	249.00
IUUC-Ttr-128698	Tursiops truncatus	96.51	0.00e+00	728.00
IUUC-Vvi-131647	Vitis vinifera	41.64	4.00e-79	288.00
IUUC-Xtr-131893	Xenopus tropicalis	83.38	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence