iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-07	31.7	338	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sd.tllvsGsdDgtikvWDlr 31
           vt   +  s  ++l+s++ D  ++vWD+ 
   Q: 338  VTTHTWhpSKpRTLLSAASDAALHVWDWV 366
           7888899644688**************86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MELAEDWLVE SLRLYQDFHA FDLSGATRVL EWVGEKGVFV AGYESLKKNE ILHLILPLRL 60
SVKENQGLYP ERDFKVRHGG FSDRAVFDLK HVPDTRLLVT SGLPGCYIQV WQIREDNDVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACAGTTG CTATGGAGCT CGCAGAGGAC TGGCTCGTGG AGTCTTTGCG CTTGTAAATC 60
GGGTCGTGGG CGGGTCTGAT GGGCAATGGG GGAGGGCGCG GGCCGTCGCG GGCTCGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

rno:308751

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003810	Anas platyrhynchos	46.04	2.00e-75	275.00
IUUC-Aca-004551	Anolis carolinensis	46.79	8.00e-90	323.00
IUUC-Ame-011375	Astyanax mexicanus	41.30	4.00e-70	258.00
IUUC-Cja-019446	Callithrix jacchus	78.17	5.00e-172	597.00
IUUC-Cpo-021556	Cavia porcellus	74.13	7.00e-159	553.00
IUUC-Csa-023764	Chlorocebus sabaeus	78.65	1.00e-165	575.00
IUUC-Dre-027768	Danio rerio	40.05	4.00e-70	258.00
IUUC-Dno-029355	Dasypus novemcinctus	77.09	2.00e-161	561.00
IUUC-Dor-030340	Dipodomys ordii	73.84	8.00e-157	546.00
IUUC-Eca-034069	Equus caballus	78.71	5.00e-173	600.00
IUUC-Fca-036227	Felis catus	76.82	1.00e-169	588.00
IUUC-Fal-036831	Ficedula albicollis	48.81	2.00e-79	289.00
IUUC-Gga-040660	Gallus gallus	43.68	4.00e-57	214.00
IUUC-Ggo-044760	Gorilla gorilla	79.29	6.00e-159	553.00
IUUC-Itr-048534	Ictidomys tridecemlineatus	78.98	1.00e-167	582.00
IUUC-Loc-051912	Lepisosteus oculatus	45.04	8.00e-84	303.00
IUUC-Mcc-055199	Macaca mulatta	78.38	3.00e-165	574.00
IUUC-Meu-056694	Macropus eugenii	69.19	6.00e-68	251.00
IUUC-Mmr-061718	Microcebus murinus	79.84	4.00e-175	607.00
IUUC-Mdo-062410	Monodelphis domestica	61.41	5.00e-129	454.00
IUUC-Mmu-063465	Mus musculus	91.64	0.00e+00	701.00
IUUC-Mpu-066811	Mustela putorius furo	77.63	6.00e-170	590.00
IUUC-Mlu-067240	Myotis lucifugus	79.51	7.00e-168	583.00
IUUC-Opr-071053	Ochotona princeps	73.84	4.00e-158	550.00
IUUC-Ont-072461	Oreochromis niloticus	39.46	3.00e-62	232.00
IUUC-Oan-072917	Ornithorhynchus anatinus	53.92	2.00e-28	119.00
IUUC-Ola-086785	Oryzias latipes	35.05	6.00e-58	218.00
IUUC-Oga-089181	Otolemur garnettii	76.55	7.00e-169	586.00
IUUC-Ptr-091381	Pan troglodytes	77.03	1.00e-152	532.00
IUUC-Pan-092000	Papio anubis	78.38	5.00e-166	577.00
IUUC-Psi-093855	Pelodiscus sinensis	48.59	2.00e-93	335.00
IUUC-Pfo-096886	Poecilia formosa	38.44	6.00e-58	218.00
IUUC-Pab-097682	Pongo abelii	72.01	5.00e-146	510.00
IUUC-Pva-102897	Pteropus vampyrus	79.62	3.00e-166	577.00
IUUC-Ssc-115708	Sus scrofa	77.72	1.00e-157	549.00
IUUC-Tgu-117245	Taeniopygia guttata	48.34	5.00e-78	284.00
IUUC-Tni-120369	Tetraodon nigroviridis	34.86	3.00e-52	199.00
IUUC-Tbe-128090	Tupaia belangeri	76.06	5.00e-150	523.00
IUUC-Ttr-129030	Tursiops truncatus	81.07	7.00e-170	589.00
IUUC-Xtr-132104	Xenopus tropicalis	45.92	2.00e-91	329.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence