iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048062

Ensembl Protein ID

ENSSTOP00000002281.2

UniProt Accession

I3M0M9; I3M0M9_ICTTR

Genbank Protein ID

ENSSTOP00000002281

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01046265

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000002539.2	ENSSTOT00000002549.2	ENSSTOP00000002281.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-29	99.4	322	356
UBD/Beta-Prp	2.90e-41	141.6	145	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ c+++ +++++vsG+dDg++ +W+l++ +
   Q: 322  GHQGSIDCIHLiNEGHMVSGADDGSVALWSLSKKR 356
           8*********9999****************97665 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheae........vtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+  itc+ ++pd+  ++++ +d ti+ w+v++g++   + ++++++++        + ++ +s+dgk+l++g + ++i +w+ ++++ 
   Q: 145  HQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGQKlhvIPRVKKDTEGqppghcthILCMAISSDGKYLASGDRSKLILIWEAESCQH 233
           56689999999***********************99677334433333356677777******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++t++gh d v  l+f + ++ l s+shdr ++vw++ +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l   
   Q: 234  LYTFTGHRDAVSGLAFRKGTHQLYSTSHDRSVKVWNVAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFY 321
           ******************99***********************9.***********************************999988755 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl.nght..........dnvksvrfspnderlvsgssDgsiriWdlr 252
            g h++s+ ++ +  +g ++vsg++dg+v lw+l++++ ++   ++h            +v+sv+++ n++++++gs+ + +++W + 
   Q: 322  -G-HQGSIDCIHLINEG-HMVSGADDGSVALWSLSKKRPLVLHrEAHGlqgmpgleqpFWVSSVAALLNTDLVATGSHNNCVKLWQCG 406
           .6.*********99987.*****************8887443303344667888888899*************************875 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MSATAAARKP GKQASRAGAA AEPSKRRRKA DSAGNRKKLK DGGKMNEEIS SDSEAESPAQ 60
GKIEEEEEEE LEETVQEKKL RLAKLYLEQL RQQEEEKAEA REFEEDQVAG RLKEDVLEQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTAGCCAC GAGCCTCTGT CCTATGGACA TTTGGGGGCG TGACAGAACC CTCGGGTGGA 60
CCCAATGAAG TTGCGGGAGG CGGGACTCGA CGGGCGGCAG AAACCTGTCA TGGCGCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	33.25	7.00e-56	211.00
IUUC-Aml-002072	Ailuropoda melanoleuca	88.06	0.00e+00	733.00
IUUC-Atr-002824	Amborella trichopoda	36.89	7.00e-70	257.00
IUUC-Apl-003264	Anas platyrhynchos	74.13	9.00e-164	569.00
IUUC-Aca-004898	Anolis carolinensis	72.65	0.00e+00	630.00
IUUC-Aly-005535	Arabidopsis lyrata	37.97	1.00e-65	243.00
IUUC-Ath-007119	Arabidopsis thaliana	37.47	4.00e-74	271.00
IUUC-Ago-007710	Ashbya gossypii	28.78	7.00e-57	214.00
IUUC-Acl-008345	Aspergillus clavatus	32.09	3.00e-56	212.00
IUUC-Afl-008718	Aspergillus flavus	30.72	6.00e-55	208.00
IUUC-Afu-008966	Aspergillus fumigatus	29.86	3.00e-54	206.00
IUUC-Ani-009214	Aspergillus nidulans	30.71	1.00e-57	217.00
IUUC-Ang-009774	Aspergillus niger	33.33	5.00e-58	218.00
IUUC-Aor-009956	Aspergillus oryzae	30.72	6.00e-55	208.00
IUUC-Ate-010449	Aspergillus terreus	30.79	2.00e-55	209.00
IUUC-Ame-011860	Astyanax mexicanus	71.50	7.00e-167	579.00
IUUC-Bgr-012213	Blumeria graminis	28.57	7.00e-63	234.00
IUUC-Bta-012698	Bos taurus	89.01	0.00e+00	732.00
IUUC-Bci-013973	Botrytis cinerea	28.09	4.00e-59	222.00
IUUC-Bdi-014790	Brachypodium distachyon	35.34	9.00e-63	234.00
IUUC-Bol-016068	Brassica oleracea	39.95	4.00e-68	251.00
IUUC-Bra-017410	Brassica rapa	39.42	5.00e-63	234.00
IUUC-Cel-018616	Caenorhabditis elegans	37.67	2.00e-73	269.00
IUUC-Cja-019532	Callithrix jacchus	86.95	0.00e+00	719.00
IUUC-Cfa-020961	Canis familiaris	83.97	0.00e+00	697.00
IUUC-Cpo-021527	Cavia porcellus	85.08	0.00e+00	710.00
IUUC-Csa-023106	Chlorocebus sabaeus	89.80	0.00e+00	716.00
IUUC-Cin-025670	Ciona intestinalis	51.41	5.00e-122	431.00
IUUC-Csv-026172	Ciona savignyi	51.15	9.00e-116	409.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	31.99	3.00e-61	229.00
IUUC-Cne-027070	Cryptococcus neoformans	29.30	1.00e-44	174.00
IUUC-Cme-027125	Cyanidioschyzon merolae	26.39	7.00e-35	141.00
IUUC-Dre-027919	Danio rerio	67.87	3.00e-158	551.00
IUUC-Dno-029684	Dasypus novemcinctus	90.40	3.00e-161	561.00
IUUC-Dor-030363	Dipodomys ordii	81.28	1.00e-98	353.00
IUUC-Dse-031503	Dothistroma septosporum	31.20	6.00e-60	224.00
IUUC-Dme-031979	Drosophila melanogaster	43.29	7.00e-96	343.00
IUUC-Eca-033735	Equus caballus	91.30	0.00e+00	691.00
IUUC-Fca-036193	Felis catus	88.37	0.00e+00	710.00
IUUC-Fal-037058	Ficedula albicollis	69.63	1.00e-165	575.00
IUUC-Fox-038036	Fusarium oxysporum	31.40	6.00e-61	228.00
IUUC-Fso-038298	Fusarium solani	31.72	5.00e-60	225.00
IUUC-Gmo-038796	Gadus morhua	65.24	4.00e-140	490.00
IUUC-Ggr-040074	Gaeumannomyces graminis	31.27	5.00e-54	205.00
IUUC-Gga-040743	Gallus gallus	77.98	1.00e-136	478.00
IUUC-Gac-042583	Gasterosteus aculeatus	58.60	1.00e-166	578.00
IUUC-Gma-042659	Glycine max	39.04	2.00e-79	289.00
IUUC-Ggo-045543	Gorilla gorilla	88.21	0.00e+00	721.00
IUUC-Hsa-047017	Homo sapiens	89.34	0.00e+00	716.00
IUUC-Hvu-047173	Hordeum vulgare	37.43	6.00e-69	254.00
IUUC-Kpa-049262	Komagataella pastoris	30.92	2.00e-58	219.00
IUUC-Lch-050566	Latimeria chalumnae	72.85	3.00e-154	538.00
IUUC-Lpe-051651	Leersia perrieri	35.87	5.00e-67	248.00
IUUC-Loc-051997	Lepisosteus oculatus	67.87	4.00e-167	580.00
IUUC-Lma-053182	Leptosphaeria maculans	29.92	8.00e-59	221.00
IUUC-Laf-054105	Loxodonta africana	90.45	0.00e+00	693.00
IUUC-Mcc-055215	Macaca mulatta	89.57	0.00e+00	716.00
IUUC-Meu-055943	Macropus eugenii	79.35	0.00e+00	637.00
IUUC-Mor-057069	Magnaporthe oryzae	31.97	2.00e-62	233.00
IUUC-Mpo-057358	Magnaporthe poae	32.09	1.00e-52	201.00
IUUC-Mtr-058209	Medicago truncatula	38.73	8.00e-78	284.00
IUUC-Mla-059043	Melampsora laricipopulina	27.36	2.00e-47	183.00
IUUC-Mga-060024	Meleagris gallopavo	74.40	5.00e-153	533.00
IUUC-Mvi-060371	Microbotryum violaceum	31.24	7.00e-66	244.00
IUUC-Mmr-061403	Microcebus murinus	90.36	0.00e+00	714.00
IUUC-Mdo-063026	Monodelphis domestica	72.44	0.00e+00	653.00
IUUC-Mmu-063646	Mus musculus	89.44	0.00e+00	724.00
IUUC-Mac-065149	Musa acuminata	39.03	1.00e-78	286.00
IUUC-Mpu-065760	Mustela putorius furo	86.74	0.00e+00	736.00
IUUC-Mlu-067963	Myotis lucifugus	89.79	0.00e+00	714.00
IUUC-Nfi-068288	Neosartorya fischeri	31.87	2.00e-57	217.00
IUUC-Ncr-068679	Neurospora crassa	32.11	2.00e-53	203.00
IUUC-Nle-069766	Nomascus leucogenys	80.46	0.00e+00	640.00
IUUC-Opr-070906	Ochotona princeps	87.16	0.00e+00	724.00
IUUC-Ont-071661	Oreochromis niloticus	64.95	1.00e-168	585.00
IUUC-Oan-073465	Ornithorhynchus anatinus	66.87	5.00e-148	517.00
IUUC-Ocu-074263	Oryctolagus cuniculus	85.08	0.00e+00	722.00
IUUC-Oba-075607	Oryza barthii	38.42	3.00e-64	238.00
IUUC-Ogl-077387	Oryza glaberrima	36.77	1.00e-66	246.00
IUUC-Ogu-078323	Oryza glumaepatula	38.40	2.00e-67	249.00
IUUC-Oin-079977	Oryza indica	31.83	4.00e-45	175.00
IUUC-Olo-080857	Oryza longistaminata	38.28	1.00e-67	249.00
IUUC-Ome-081568	Oryza meridionalis	38.02	1.00e-66	246.00
IUUC-Oni-082685	Oryza nivara	38.40	5.00e-71	261.00
IUUC-Opu-084049	Oryza punctata	38.13	3.00e-67	248.00
IUUC-Oru-084348	Oryza rufipogon	38.40	5.00e-71	261.00
IUUC-Osa-086076	Oryza sativa	38.40	5.00e-71	261.00
IUUC-Ola-086991	Oryzias latipes	68.72	1.00e-162	565.00
IUUC-Olu-087891	Ostreococcus lucimarinus	35.37	1.00e-64	239.00
IUUC-Oga-088991	Otolemur garnettii	86.77	0.00e+00	726.00
IUUC-Oar-090430	Ovis aries	90.79	0.00e+00	703.00
IUUC-Ptr-091359	Pan troglodytes	89.57	0.00e+00	717.00
IUUC-Pan-092499	Papio anubis	89.57	0.00e+00	715.00
IUUC-Pma-094447	Petromyzon marinus	60.06	7.00e-127	446.00
IUUC-Pno-095008	Phaeosphaeria nodorum	29.68	7.00e-62	231.00
IUUC-Ppa-095680	Physcomitrella patens	38.89	2.00e-78	286.00
IUUC-Pfo-096430	Poecilia formosa	66.89	6.00e-166	576.00
IUUC-Pab-097649	Pongo abelii	89.34	0.00e+00	714.00
IUUC-Pop-100037	Populus trichocarpa	39.21	5.00e-77	281.00
IUUC-Pca-100317	Procavia capensis	70.20	2.00e-123	436.00
IUUC-Ppe-101999	Prunus persica	37.24	3.00e-79	288.00
IUUC-Pva-103046	Pteropus vampyrus	90.30	0.00e+00	726.00
IUUC-Pgr-103655	Puccinia graminis	29.77	4.00e-53	202.00
IUUC-Ptt-103812	Puccinia triticina	30.79	2.00e-46	180.00
IUUC-Pte-104243	Pyrenophora teres	29.92	2.00e-58	220.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	30.10	6.00e-61	228.00
IUUC-Rno-104973	Rattus norvegicus	89.58	0.00e+00	719.00
IUUC-Sce-106329	Saccharomyces cerevisiae	25.61	6.00e-48	185.00
IUUC-Sha-106941	Sarcophilus harrisii	81.57	0.00e+00	649.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	33.11	2.00e-65	243.00
IUUC-Spo-108329	Schizosaccharomyces pombe	36.91	4.00e-75	275.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	29.07	7.00e-60	224.00
IUUC-Smo-109198	Selaginella moellendorffii	38.39	3.00e-64	238.00
IUUC-Sit-109694	Setaria italica	38.07	1.00e-74	273.00
IUUC-Sly-111294	Solanum lycopersicum	39.38	4.00e-80	291.00
IUUC-Stu-112747	Solanum tuberosum	39.64	6.00e-81	294.00
IUUC-Sar-113315	Sorex araneus	71.02	1.00e-72	266.00
IUUC-Sbi-114694	Sorghum bicolor	36.56	3.00e-73	268.00
IUUC-Sre-114937	Sporisorium reilianum	29.07	1.00e-66	247.00
IUUC-Ssc-116127	Sus scrofa	90.30	0.00e+00	702.00
IUUC-Tgu-117242	Taeniopygia guttata	69.41	1.00e-106	378.00
IUUC-Tru-118285	Takifugu rubripes	68.43	3.00e-167	581.00
IUUC-Tni-120368	Tetraodon nigroviridis	67.93	8.00e-161	559.00
IUUC-Tca-121724	Theobroma cacao	37.82	7.00e-74	271.00
IUUC-Tre-122106	Trichoderma reesei	31.91	9.00e-66	244.00
IUUC-Tvi-122526	Trichoderma virens	32.35	5.00e-65	241.00
IUUC-Tae-122939	Triticum aestivum	37.17	5.00e-68	251.00
IUUC-Tur-126548	Triticum urartu	37.17	7.00e-68	251.00
IUUC-Tme-126985	Tuber melanosporum	34.90	4.00e-66	245.00
IUUC-Tbe-127923	Tupaia belangeri	89.22	0.00e+00	711.00
IUUC-Ttr-129308	Tursiops truncatus	83.78	0.00e+00	638.00
IUUC-Uma-129472	Ustilago maydis	29.34	1.00e-57	217.00
IUUC-Vda-129910	Verticillium dahliae	30.93	3.00e-62	232.00
IUUC-Vvi-131683	Vitis vinifera	38.76	3.00e-85	308.00
IUUC-Xtr-132118	Xenopus tropicalis	63.66	2.00e-160	558.00
IUUC-Xma-133804	Xiphophorus maculatus	66.89	3.00e-166	577.00
IUUC-Yli-134639	Yarrowia lipolytica	32.71	3.00e-61	228.00
IUUC-Zma-135884	Zea mays	36.97	7.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence