iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109186

Ensembl Protein ID

EFJ20190

UniProt Accession

D8S688; D8S688_SELML

Genbank Protein ID

EFJ20190.1

Protein Name

Protein HIRA

Genbank Nucleotide ID

GL377603

Gene Name

HIRA1-1; SELMODRAFT_109484

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_109484	EFJ20190	EFJ20190

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-26	90.0	123	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHt++v +la+ +d  +l+++s D+t+++W +
   Q: 123  GHTADVVDLAWsPDdSMLATCSLDNTVRIWKM 154
           8***********777***************97 PP

Organism

Selaginella moellendorffii

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MIVEKPEWLR HEGLQIFSVD FQPSGQRCAT AGGDHKVRIW NTRPLMKEGE ADRGGEKLLA 60
TLCDHFGSVN CVRWSKSGLY VASGSDGSLV LIHEKRHGTG TVEFGSGEPA NVENWKVCAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTGTGG AGAAGCCGGA ATGGCTCCGT CACGAGGGCC TCCAGATCTT CTCGGTGGAT 60
TTCCAGCCCA GCGGGCAGCG ATGCGCCACA GCCGGGGGCG ATCACAAGGT ATGTGTATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR031120--HIR1
IPR011494--Hira
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

smo:SELMODRAFT_109484

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	50.49	0.00e+00	911.00
IUUC-Aml-001723	Ailuropoda melanoleuca	41.34	6.00e-81	295.00
IUUC-Atr-003132	Amborella trichopoda	52.58	0.00e+00	966.00
IUUC-Aca-004733	Anolis carolinensis	36.54	1.00e-85	310.00
IUUC-Aly-005446	Arabidopsis lyrata	49.59	0.00e+00	879.00
IUUC-Ath-007627	Arabidopsis thaliana	48.22	0.00e+00	885.00
IUUC-Acl-008104	Aspergillus clavatus	31.63	1.00e-72	267.00
IUUC-Afl-008591	Aspergillus flavus	31.13	2.00e-69	256.00
IUUC-Afu-008781	Aspergillus fumigatus	31.11	1.00e-65	244.00
IUUC-Ani-009272	Aspergillus nidulans	28.60	9.00e-61	228.00
IUUC-Ang-009655	Aspergillus niger	30.67	2.00e-70	259.00
IUUC-Aor-010119	Aspergillus oryzae	31.13	2.00e-69	256.00
IUUC-Ate-010530	Aspergillus terreus	27.01	1.00e-58	221.00
IUUC-Bgr-012237	Blumeria graminis	30.27	2.00e-62	233.00
IUUC-Bta-013320	Bos taurus	36.51	1.00e-80	294.00
IUUC-Bci-013795	Botrytis cinerea	32.84	3.00e-67	249.00
IUUC-Bdi-014075	Brachypodium distachyon	50.61	0.00e+00	924.00
IUUC-Bol-016440	Brassica oleracea	50.36	0.00e+00	900.00
IUUC-Bra-016651	Brassica rapa	49.43	0.00e+00	867.00
IUUC-Cel-018692	Caenorhabditis elegans	29.03	3.00e-46	179.00
IUUC-Cfa-020132	Canis familiaris	40.92	5.00e-81	295.00
IUUC-Cpo-021484	Cavia porcellus	41.35	9.00e-85	307.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	38.21	2.00e-76	280.00
IUUC-Csv-026154	Ciona savignyi	40.33	2.00e-83	303.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	33.64	7.00e-67	248.00
IUUC-Cne-026891	Cryptococcus neoformans	38.16	3.00e-77	282.00
IUUC-Dre-027655	Danio rerio	33.17	5.00e-86	311.00
IUUC-Dno-029557	Dasypus novemcinctus	35.76	3.00e-70	259.00
IUUC-Dse-031334	Dothistroma septosporum	31.95	3.00e-68	253.00
IUUC-Eca-033430	Equus caballus	37.90	6.00e-83	301.00
IUUC-Fca-036121	Felis catus	35.95	7.00e-82	298.00
IUUC-Fal-036817	Ficedula albicollis	35.23	1.00e-81	297.00
IUUC-Fox-037906	Fusarium oxysporum	32.14	2.00e-66	246.00
IUUC-Fso-038409	Fusarium solani	30.13	3.00e-67	249.00
IUUC-Gmo-039151	Gadus morhua	40.57	2.00e-82	299.00
IUUC-Gga-040936	Gallus gallus	36.54	5.00e-85	308.00
IUUC-Gma-044252	Glycine max	51.43	0.00e+00	934.00
IUUC-Hvu-047587	Hordeum vulgare	50.74	0.00e+00	863.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	42.27	6.00e-63	233.00
IUUC-Kpa-049145	Komagataella pastoris	27.97	4.00e-52	199.00
IUUC-Lch-050474	Latimeria chalumnae	39.75	3.00e-80	293.00
IUUC-Lpe-051209	Leersia perrieri	49.34	0.00e+00	886.00
IUUC-Loc-052119	Lepisosteus oculatus	37.04	2.00e-82	299.00
IUUC-Lma-053237	Leptosphaeria maculans	33.74	3.00e-68	252.00
IUUC-Mcc-055621	Macaca mulatta	36.75	5.00e-76	278.00
IUUC-Meu-055914	Macropus eugenii	41.24	3.00e-57	216.00
IUUC-Mor-057090	Magnaporthe oryzae	31.71	4.00e-65	242.00
IUUC-Mpo-057364	Magnaporthe poae	32.68	2.00e-66	247.00
IUUC-Mtr-057744	Medicago truncatula	51.32	0.00e+00	933.00
IUUC-Mla-058914	Melampsora laricipopulina	27.15	2.00e-77	283.00
IUUC-Mga-060181	Meleagris gallopavo	36.04	4.00e-81	295.00
IUUC-Mvi-060432	Microbotryum violaceum	34.01	2.00e-62	233.00
IUUC-Mac-065137	Musa acuminata	51.82	0.00e+00	894.00
IUUC-Mpu-066732	Mustela putorius furo	41.34	7.00e-81	294.00
IUUC-Nfi-068396	Neosartorya fischeri	30.91	5.00e-65	242.00
IUUC-Ncr-068842	Neurospora crassa	33.66	2.00e-67	250.00
IUUC-Ont-072105	Oreochromis niloticus	36.15	9.00e-82	297.00
IUUC-Ocu-074962	Oryctolagus cuniculus	37.10	1.00e-82	300.00
IUUC-Oba-075178	Oryza barthii	50.46	0.00e+00	910.00
IUUC-Obr-076399	Oryza brachyantha	50.46	0.00e+00	916.00
IUUC-Ogu-078797	Oryza glumaepatula	50.46	0.00e+00	910.00
IUUC-Oin-080085	Oryza indica	49.62	0.00e+00	843.00
IUUC-Olo-081048	Oryza longistaminata	67.07	1.00e-134	474.00
IUUC-Ome-081324	Oryza meridionalis	50.82	0.00e+00	910.00
IUUC-Oni-082548	Oryza nivara	50.57	0.00e+00	911.00
IUUC-Oru-084339	Oryza rufipogon	50.36	0.00e+00	909.00
IUUC-Osa-085782	Oryza sativa	50.36	0.00e+00	909.00
IUUC-Ola-087302	Oryzias latipes	35.44	1.00e-78	287.00
IUUC-Oga-087935	Otolemur garnettii	37.10	3.00e-82	299.00
IUUC-Oar-089229	Ovis aries	33.98	3.00e-67	249.00
IUUC-Psi-094053	Pelodiscus sinensis	36.70	2.00e-81	296.00
IUUC-Pno-094985	Phaeosphaeria nodorum	31.84	9.00e-59	221.00
IUUC-Ppa-095819	Physcomitrella patens	53.81	0.00e+00	943.00
IUUC-Pfo-096857	Poecilia formosa	36.94	8.00e-80	291.00
IUUC-Pop-099587	Populus trichocarpa	50.20	0.00e+00	909.00
IUUC-Pca-100558	Procavia capensis	47.15	4.00e-47	182.00
IUUC-Ppe-101261	Prunus persica	50.92	0.00e+00	923.00
IUUC-Pva-102683	Pteropus vampyrus	37.40	2.00e-83	303.00
IUUC-Pgr-103660	Puccinia graminis	36.17	1.00e-61	230.00
IUUC-Ptt-103900	Puccinia triticina	36.46	1.00e-60	227.00
IUUC-Pte-104209	Pyrenophora teres	33.18	8.00e-70	258.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	32.94	6.00e-69	255.00
IUUC-Sce-106291	Saccharomyces cerevisiae	33.12	9.00e-63	234.00
IUUC-Sha-107514	Sarcophilus harrisii	35.35	1.00e-70	260.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	34.30	2.00e-73	270.00
IUUC-Spo-108162	Schizosaccharomyces pombe	36.41	2.00e-71	263.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	38.12	2.00e-27	117.00
IUUC-Sit-109980	Setaria italica	51.47	0.00e+00	938.00
IUUC-Sly-111547	Solanum lycopersicum	50.97	0.00e+00	887.00
IUUC-Stu-112705	Solanum tuberosum	51.22	0.00e+00	896.00
IUUC-Sbi-114528	Sorghum bicolor	51.80	0.00e+00	914.00
IUUC-Sre-115061	Sporisorium reilianum	36.03	4.00e-71	262.00
IUUC-Ssc-116364	Sus scrofa	37.90	3.00e-83	302.00
IUUC-Tgu-116645	Taeniopygia guttata	35.03	3.00e-81	296.00
IUUC-Tru-117590	Takifugu rubripes	37.40	8.00e-86	311.00
IUUC-Tsy-119212	Tarsius syrichta	41.84	4.00e-69	255.00
IUUC-Tni-119915	Tetraodon nigroviridis	36.15	1.00e-84	307.00
IUUC-Tca-121765	Theobroma cacao	51.07	0.00e+00	929.00
IUUC-Tre-121887	Trichoderma reesei	31.70	4.00e-61	229.00
IUUC-Tvi-122262	Trichoderma virens	33.01	2.00e-60	226.00
IUUC-Tae-123009	Triticum aestivum	46.36	4.00e-147	514.00
IUUC-Tur-126483	Triticum urartu	52.33	0.00e+00	931.00
IUUC-Tme-127202	Tuber melanosporum	28.13	1.00e-49	191.00
IUUC-Tbe-127350	Tupaia belangeri	33.80	1.00e-50	194.00
IUUC-Uma-129465	Ustilago maydis	36.06	1.00e-72	267.00
IUUC-Vda-129844	Verticillium dahliae	27.44	5.00e-72	265.00
IUUC-Vpa-130374	Vicugna pacos	35.29	7.00e-19	88.20
IUUC-Vvi-131397	Vitis vinifera	51.01	0.00e+00	920.00
IUUC-Xtr-132057	Xenopus tropicalis	36.24	1.00e-84	307.00
IUUC-Xma-134139	Xiphophorus maculatus	36.32	8.00e-70	257.00
IUUC-Yli-134424	Yarrowia lipolytica	35.46	7.00e-69	254.00
IUUC-Zma-135839	Zea mays	51.08	0.00e+00	923.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence