iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095373

Ensembl Protein ID

PP1S291_47V6.1

UniProt Accession

A9TQT2; A9TQT2_PHYPA

Genbank Protein ID

EDQ54236.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545180

Gene Name

PHYPADRAFT_149124

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S291_47V6	PP1S291_47V6.1	PP1S291_47V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-18	65.7	78	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           gH + v+ +a+  s+ ll+sGsdD ++ +WD+ + +
   Q: 78   GHIGCVNTIAWnaSGSLLISGSDDTKVNIWDYGSRK 113
           899*********8779***************86655 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRQFFSPDGN MFGHIIGRSL NYSQVRRELR VERCERNVVK VDCVVMVPYP VLPQYSMRAL 60
QMHSSLVQRL DLEKVMEGHI GCVNTIAWNA SGSLLISGSD DTKVNIWDYG SRKLIHSIDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCAGT TTTTCAGTCC TGATGGCAAC ATGTTCGGCC ATATCATTGG CCGATCTCTT 60
AATTACTCGC AGGTTATTTG AGAACACCTC CTTGTTATTC AATTTCGTCA GTGTACATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR027295--Quinoprotein_ADH-like_fam
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50293--TPR_REGION
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma

KEGG

ppp:PHYPADRAFT_149124

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000083	Aegilops tauschii	49.68	2.00e-113	402.00
IUUC-Aml-001699	Ailuropoda melanoleuca	30.67	7.00e-49	187.00
IUUC-Atr-002509	Amborella trichopoda	60.00	2.00e-158	551.00
IUUC-Apl-003379	Anas platyrhynchos	29.89	2.00e-47	183.00
IUUC-Aca-005202	Anolis carolinensis	29.70	5.00e-47	182.00
IUUC-Aly-006475	Arabidopsis lyrata	53.49	0.00e+00	766.00
IUUC-Ath-007666	Arabidopsis thaliana	53.07	0.00e+00	762.00
IUUC-Acl-008211	Aspergillus clavatus	31.36	5.00e-35	142.00
IUUC-Afl-008592	Aspergillus flavus	32.15	4.00e-35	143.00
IUUC-Afu-008828	Aspergillus fumigatus	29.82	2.00e-31	130.00
IUUC-Ani-009263	Aspergillus nidulans	31.29	2.00e-35	144.00
IUUC-Ang-009671	Aspergillus niger	31.40	3.00e-33	137.00
IUUC-Aor-010229	Aspergillus oryzae	32.15	3.00e-35	143.00
IUUC-Ate-010555	Aspergillus terreus	31.98	2.00e-36	147.00
IUUC-Ame-011314	Astyanax mexicanus	37.09	5.00e-42	165.00
IUUC-Bta-013552	Bos taurus	35.77	2.00e-41	163.00
IUUC-Bdi-014100	Brachypodium distachyon	53.91	5.00e-143	501.00
IUUC-Bol-016409	Brassica oleracea	53.06	0.00e+00	754.00
IUUC-Bra-016979	Brassica rapa	53.17	0.00e+00	756.00
IUUC-Cel-018561	Caenorhabditis elegans	33.64	2.00e-26	112.00
IUUC-Cja-019015	Callithrix jacchus	35.77	3.00e-41	162.00
IUUC-Cfa-020200	Canis familiaris	30.59	6.00e-49	188.00
IUUC-Cpo-021739	Cavia porcellus	30.59	5.00e-49	188.00
IUUC-Cre-022659	Chlamydomonas reinhardtii	34.96	3.00e-34	139.00
IUUC-Csa-023648	Chlorocebus sabaeus	30.67	7.00e-49	187.00
IUUC-Cho-024527	Choloepus hoffmanni	36.94	4.00e-25	109.00
IUUC-Csv-026289	Ciona savignyi	33.41	9.00e-53	200.00
IUUC-Cme-027316	Cyanidioschyzon merolae	31.80	6.00e-32	132.00
IUUC-Dre-028745	Danio rerio	30.40	1.00e-45	177.00
IUUC-Dno-029403	Dasypus novemcinctus	30.41	7.00e-49	187.00
IUUC-Dor-030332	Dipodomys ordii	27.19	6.00e-35	141.00
IUUC-Dse-031250	Dothistroma septosporum	29.50	5.00e-29	122.00
IUUC-Dme-031811	Drosophila melanogaster	34.32	4.00e-55	208.00
IUUC-Eca-033783	Equus caballus	30.41	8.00e-49	187.00
IUUC-Eeu-034732	Erinaceus europaeus	30.24	2.00e-49	190.00
IUUC-Fca-036543	Felis catus	30.67	7.00e-49	187.00
IUUC-Fal-037245	Ficedula albicollis	30.20	3.00e-47	182.00
IUUC-Gmo-039346	Gadus morhua	30.74	7.00e-49	187.00
IUUC-Gga-041034	Gallus gallus	29.89	3.00e-47	182.00
IUUC-Gac-041297	Gasterosteus aculeatus	29.61	3.00e-48	186.00
IUUC-Gma-043128	Glycine max	51.52	0.00e+00	709.00
IUUC-Ggo-045309	Gorilla gorilla	30.67	7.00e-49	187.00
IUUC-Hsa-046622	Homo sapiens	30.67	7.00e-49	187.00
IUUC-Itr-048064	Ictidomys tridecemlineatus	35.77	2.00e-41	163.00
IUUC-Lch-049810	Latimeria chalumnae	30.43	7.00e-48	184.00
IUUC-Lpe-051600	Leersia perrieri	48.16	4.00e-179	620.00
IUUC-Loc-052088	Lepisosteus oculatus	31.71	3.00e-48	186.00
IUUC-Lma-053032	Leptosphaeria maculans	31.74	4.00e-33	136.00
IUUC-Laf-054097	Loxodonta africana	30.59	4.00e-49	188.00
IUUC-Mcc-054848	Macaca mulatta	30.67	7.00e-49	187.00
IUUC-Mtr-057735	Medicago truncatula	50.33	0.00e+00	687.00
IUUC-Mga-059622	Meleagris gallopavo	29.89	2.00e-47	182.00
IUUC-Mmr-060709	Microcebus murinus	30.19	2.00e-48	186.00
IUUC-Mdo-062401	Monodelphis domestica	30.91	1.00e-47	184.00
IUUC-Mmu-063899	Mus musculus	30.95	5.00e-50	191.00
IUUC-Mac-064840	Musa acuminata	53.22	0.00e+00	751.00
IUUC-Mpu-066268	Mustela putorius furo	30.99	9.00e-49	187.00
IUUC-Mlu-067211	Myotis lucifugus	35.96	5.00e-44	171.00
IUUC-Nfi-068606	Neosartorya fischeri	30.41	5.00e-33	135.00
IUUC-Nle-070019	Nomascus leucogenys	30.41	3.00e-48	186.00
IUUC-Opr-071008	Ochotona princeps	30.67	7.00e-49	187.00
IUUC-Ont-072123	Oreochromis niloticus	30.67	9.00e-50	191.00
IUUC-Ocu-074166	Oryctolagus cuniculus	30.59	9.00e-49	187.00
IUUC-Oba-075298	Oryza barthii	52.78	9.00e-135	473.00
IUUC-Obr-076849	Oryza brachyantha	56.09	5.00e-134	471.00
IUUC-Ogl-077515	Oryza glaberrima	52.78	9.00e-135	473.00
IUUC-Ogu-077968	Oryza glumaepatula	52.00	4.00e-128	451.00
IUUC-Oin-079231	Oryza indica	51.79	3.00e-126	444.00
IUUC-Olo-081045	Oryza longistaminata	52.01	2.00e-126	447.00
IUUC-Ome-081395	Oryza meridionalis	51.56	2.00e-125	442.00
IUUC-Oni-082801	Oryza nivara	52.56	4.00e-134	471.00
IUUC-Opu-083585	Oryza punctata	58.16	3.00e-61	229.00
IUUC-Oru-085163	Oryza rufipogon	52.56	7.00e-134	470.00
IUUC-Osa-085550	Oryza sativa	63.56	3.00e-87	314.00
IUUC-Ola-086925	Oryzias latipes	31.43	4.00e-52	198.00
IUUC-Oga-088095	Otolemur garnettii	31.10	9.00e-49	187.00
IUUC-Oar-090285	Ovis aries	30.41	1.00e-48	187.00
IUUC-Ptr-091221	Pan troglodytes	30.67	7.00e-49	187.00
IUUC-Pan-091771	Papio anubis	30.67	7.00e-49	187.00
IUUC-Psi-093977	Pelodiscus sinensis	30.26	2.00e-47	183.00
IUUC-Pno-095149	Phaeosphaeria nodorum	29.37	9.00e-19	88.60
IUUC-Pfo-096640	Poecilia formosa	29.94	2.00e-50	193.00
IUUC-Pab-098513	Pongo abelii	30.67	7.00e-49	187.00
IUUC-Pop-098837	Populus trichocarpa	54.68	0.00e+00	763.00
IUUC-Pca-101095	Procavia capensis	27.12	6.00e-31	128.00
IUUC-Ppe-101507	Prunus persica	54.41	0.00e+00	774.00
IUUC-Pva-102444	Pteropus vampyrus	30.67	5.00e-49	188.00
IUUC-Pte-104187	Pyrenophora teres	33.43	8.00e-35	142.00
IUUC-Pyt-104546	Pyrenophora triticirepentis	33.05	4.00e-36	146.00
IUUC-Rno-105952	Rattus norvegicus	30.74	1.00e-49	190.00
IUUC-Sha-106614	Sarcophilus harrisii	30.72	4.00e-48	185.00
IUUC-Sja-107779	Schizosaccharomyces japonicus	31.33	1.00e-29	124.00
IUUC-Spo-108129	Schizosaccharomyces pombe	34.02	1.00e-35	144.00
IUUC-Smo-108844	Selaginella moellendorffii	55.32	0.00e+00	728.00
IUUC-Sit-110154	Setaria italica	51.40	0.00e+00	707.00
IUUC-Sly-111707	Solanum lycopersicum	54.00	0.00e+00	756.00
IUUC-Sar-113129	Sorex araneus	28.13	7.00e-29	121.00
IUUC-Sbi-113858	Sorghum bicolor	50.88	0.00e+00	673.00
IUUC-Ssc-116275	Sus scrofa	30.67	7.00e-49	187.00
IUUC-Tgu-117507	Taeniopygia guttata	30.33	2.00e-47	183.00
IUUC-Tru-117969	Takifugu rubripes	30.32	3.00e-49	189.00
IUUC-Tsy-119374	Tarsius syrichta	34.36	2.00e-36	146.00
IUUC-Tni-119887	Tetraodon nigroviridis	30.70	6.00e-47	181.00
IUUC-Tca-121722	Theobroma cacao	53.85	0.00e+00	764.00
IUUC-Tae-124583	Triticum aestivum	54.99	5.00e-137	481.00
IUUC-Tur-125968	Triticum urartu	47.74	3.00e-116	413.00
IUUC-Tme-126910	Tuber melanosporum	29.30	6.00e-28	119.00
IUUC-Ttr-128390	Tursiops truncatus	31.03	1.00e-48	187.00
IUUC-Uma-129509	Ustilago maydis	29.49	8.00e-16	78.20
IUUC-Vpa-130145	Vicugna pacos	35.77	2.00e-41	163.00
IUUC-Vvi-131565	Vitis vinifera	53.65	0.00e+00	699.00
IUUC-Xtr-132290	Xenopus tropicalis	30.44	5.00e-44	171.00
IUUC-Xma-134025	Xiphophorus maculatus	30.33	4.00e-51	195.00
IUUC-Zma-135624	Zea mays	49.66	0.00e+00	648.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence